Literature DB >> 24780085

Mechanisms of epigenetic memory.

Agustina D'Urso1, Jason H Brickner2.   

Abstract

Although genetics has an essential role in defining the development, morphology, and physiology of an organism, epigenetic mechanisms have an essential role in modulating these properties by regulating gene expression. During development, epigenetic mechanisms establish stable gene expression patterns to ensure proper differentiation. Such mechanisms also allow organisms to adapt to environmental changes and previous experiences can impact the future responsiveness of an organism to a stimulus over long timescales and even over generations. Here, we discuss the concept of epigenetic memory, defined as the stable propagation of a change in gene expression or potential induced by developmental or environmental stimuli. We highlight three distinct paradigms of epigenetic memory that operate on different timescales.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  chromatin; epigenetics; inheritance; memory; methylation; nuclear pore complex

Mesh:

Substances:

Year:  2014        PMID: 24780085      PMCID: PMC4072033          DOI: 10.1016/j.tig.2014.04.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  78 in total

Review 1.  Histone methylation versus histone acetylation: new insights into epigenetic regulation.

Authors:  J C Rice; C D Allis
Journal:  Curr Opin Cell Biol       Date:  2001-06       Impact factor: 8.382

Review 2.  Division of labor in polycomb group repression.

Authors:  Stuart S Levine; Ian F G King; Robert E Kingston
Journal:  Trends Biochem Sci       Date:  2004-09       Impact factor: 13.807

3.  Nuclear pore complexes in the organization of silent telomeric chromatin.

Authors:  V Galy; J C Olivo-Marin; H Scherthan; V Doye; N Rascalou; U Nehrbass
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

4.  Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals.

Authors:  Benjamin R Carone; Lucas Fauquier; Naomi Habib; Jeremy M Shea; Caroline E Hart; Ruowang Li; Christoph Bock; Chengjian Li; Hongcang Gu; Phillip D Zamore; Alexander Meissner; Zhiping Weng; Hans A Hofmann; Nir Friedman; Oliver J Rando
Journal:  Cell       Date:  2010-12-23       Impact factor: 41.582

Review 5.  Transgenerational epigenetic effects.

Authors:  Neil A Youngson; Emma Whitelaw
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

Review 6.  Nuclear pores as versatile platforms for gene regulation.

Authors:  Pau Pascual-Garcia; Maya Capelson
Journal:  Curr Opin Genet Dev       Date:  2014-03-12       Impact factor: 5.578

7.  Nup-PI: the nucleopore-promoter interaction of genes in yeast.

Authors:  Manfred Schmid; Ghislaine Arib; Caroline Laemmli; Junichi Nishikawa; Thérèse Durussel; Ulrich K Laemmli
Journal:  Mol Cell       Date:  2006-02-03       Impact factor: 17.970

8.  Cell cycle-dependent differences in nuclear pore complex assembly in metazoa.

Authors:  Christine M Doucet; Jessica A Talamas; Martin W Hetzer
Journal:  Cell       Date:  2010-06-11       Impact factor: 41.582

9.  Transgenerational epigenetic inheritance of longevity in Caenorhabditis elegans.

Authors:  Eric L Greer; Travis J Maures; Duygu Ucar; Anna G Hauswirth; Elena Mancini; Jana P Lim; Bérénice A Benayoun; Yang Shi; Anne Brunet
Journal:  Nature       Date:  2011-10-19       Impact factor: 49.962

10.  Gene recruitment of the activated INO1 locus to the nuclear membrane.

Authors:  Jason H Brickner; Peter Walter
Journal:  PLoS Biol       Date:  2004-09-28       Impact factor: 8.029

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  71 in total

1.  A hit-and-run heat shock factor governs sustained histone methylation and transcriptional stress memory.

Authors:  Jörn Lämke; Krzysztof Brzezinka; Simone Altmann; Isabel Bäurle
Journal:  EMBO J       Date:  2015-12-09       Impact factor: 11.598

Review 2.  Nuclear pore complexes and regulation of gene expression.

Authors:  Marcela Raices; Maximiliano A D'Angelo
Journal:  Curr Opin Cell Biol       Date:  2017-01-11       Impact factor: 8.382

3.  Histone demethylase KDM5A is transactivated by the transcription factor C/EBPβ and promotes preadipocyte differentiation by inhibiting Wnt/β-catenin signaling.

Authors:  Liang Guo; Ying-Ying Guo; Bai-Yu Li; Wan-Qiu Peng; Qi-Qun Tang
Journal:  J Biol Chem       Date:  2019-05-06       Impact factor: 5.157

4.  An Epigenetics-Based, Lifestyle Medicine-Driven Approach to Stress Management for Primary Patient Care: Implications for Medical Education.

Authors:  Jenny Lee; Frank Papa; Paresh Atu Jaini; Sarah Alpini; Tim Kenny
Journal:  Am J Lifestyle Med       Date:  2019-05-09

Review 5.  Facioscapulohumeral muscular dystrophy as a model for epigenetic regulation and disease.

Authors:  Charis L Himeda; Takako I Jones; Peter L Jones
Journal:  Antioxid Redox Signal       Date:  2014-12-04       Impact factor: 8.401

6.  Interferon stimulation creates chromatin marks and establishes transcriptional memory.

Authors:  Rui Kamada; Wenjing Yang; Yubo Zhang; Mira C Patel; Yanqin Yang; Ryota Ouda; Anup Dey; Yoshiyuki Wakabayashi; Kazuyasu Sakaguchi; Takashi Fujita; Tomohiko Tamura; Jun Zhu; Keiko Ozato
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-10       Impact factor: 11.205

7.  Heterogeneity of adult masseter muscle satellite cells with cardiomyocyte differentiation potential.

Authors:  Wei Huang; Jialiang Liang; Yuliang Feng; Zhanfeng Jia; Lin Jiang; Wenfeng Cai; Christian Paul; Jianguo G Gu; Peter J Stambrook; Ronald W Millard; Xiao-Lan Zhu; Ping Zhu; Yigang Wang
Journal:  Exp Cell Res       Date:  2018-05-26       Impact factor: 3.905

Review 8.  Mechanisms for the epigenetic inheritance of stress response in single cells.

Authors:  Yuan Xue; Murat Acar
Journal:  Curr Genet       Date:  2018-05-30       Impact factor: 3.886

9.  Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce.

Authors:  Igor A Yakovlev; Elena Carneros; YeonKyeong Lee; Jorunn E Olsen; Carl Gunnar Fossdal
Journal:  Planta       Date:  2016-02-19       Impact factor: 4.116

Review 10.  Unveiling Human Non-Random Genome Editing Mechanisms Activated in Response to Chronic Environmental Changes: I. Where Might These Mechanisms Come from and What Might They Have Led To?

Authors:  Loris Zamai
Journal:  Cells       Date:  2020-10-27       Impact factor: 6.600

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