Literature DB >> 24779563

Cancer biology, toxicology and alternative methods development go hand-in-hand.

Pekka Kohonen1, Rebecca Ceder, Ines Smit, Vesa Hongisto, Glenn Myatt, Barry Hardy, Ola Spjuth, Roland Grafström.   

Abstract

Toxicological research faces the challenge of integrating knowledge from diverse fields and novel technological developments generally in the biological and medical sciences. We discuss herein the fact that the multiple facets of cancer research, including discovery related to mechanisms, treatment and diagnosis, overlap many up and coming interest areas in toxicology, including the need for improved methods and analysis tools. Common to both disciplines, in vitro and in silico methods serve as alternative investigation routes to animal studies. Knowledge on cancer development helps in understanding the relevance of chemical toxicity studies in cell models, and many bioinformatics-based cancer biomarker discovery tools are also applicable to computational toxicology. Robotics-aided, cell-based, high-throughput screening, microscale immunostaining techniques and gene expression profiling analyses are common tools in cancer research, and when sequentially combined, form a tiered approach to structured safety evaluation of thousands of environmental agents, novel chemicals or engineered nanomaterials. Comprehensive tumour data collections in databases have been translated into clinically useful data, and this concept serves as template for computer-driven evaluation of toxicity data into meaningful results. Future 'cancer research-inspired knowledge management' of toxicological data will aid the translation of basic discovery results and chemicals- and materials-testing data to information relevant to human health and environmental safety.
© 2014 Nordic Association for the Publication of BCPT (former Nordic Pharmacological Society).

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Year:  2014        PMID: 24779563     DOI: 10.1111/bcpt.12257

Source DB:  PubMed          Journal:  Basic Clin Pharmacol Toxicol        ISSN: 1742-7835            Impact factor:   4.080


  6 in total

Review 1.  High throughput toxicity screening and intracellular detection of nanomaterials.

Authors:  Andrew R Collins; Balasubramanyam Annangi; Laura Rubio; Ricard Marcos; Marco Dorn; Carolin Merker; Irina Estrela-Lopis; Mihaela Roxana Cimpan; Mohamed Ibrahim; Emil Cimpan; Melanie Ostermann; Alexander Sauter; Naouale El Yamani; Sergey Shaposhnikov; Sylvie Chevillard; Vincent Paget; Romain Grall; Jozo Delic; Felipe Goñi- de-Cerio; Blanca Suarez-Merino; Valérie Fessard; Kevin N Hogeveen; Lise Maria Fjellsbø; Elise Runden Pran; Tana Brzicova; Jan Topinka; Maria João Silva; P E Leite; A R Ribeiro; J M Granjeiro; Roland Grafström; Adriele Prina-Mello; Maria Dusinska
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2016-06-07

2.  Systematic Organization of COVID-19 Data Supported by the Adverse Outcome Pathway Framework.

Authors:  Penny Nymark; Magdalini Sachana; Sofia Batista Leite; Jukka Sund; Catharine E Krebs; Kristie Sullivan; Stephen Edwards; Laura Viviani; Catherine Willett; Brigitte Landesmann; Clemens Wittwehr
Journal:  Front Public Health       Date:  2021-05-19

3.  Ab initio chemical safety assessment: A workflow based on exposure considerations and non-animal methods.

Authors:  Elisabet Berggren; Andrew White; Gladys Ouedraogo; Alicia Paini; Andrea-Nicole Richarz; Frederic Y Bois; Thomas Exner; Sofia Leite; Leo A van Grunsven; Andrew Worth; Catherine Mahony
Journal:  Comput Toxicol       Date:  2017-11

4.  A transcriptomics data-driven gene space accurately predicts liver cytopathology and drug-induced liver injury.

Authors:  Pekka Kohonen; Juuso A Parkkinen; Egon L Willighagen; Rebecca Ceder; Krister Wennerberg; Samuel Kaski; Roland C Grafström
Journal:  Nat Commun       Date:  2017-07-03       Impact factor: 14.919

Review 5.  In silico cancer research towards 3R.

Authors:  Claire Jean-Quartier; Fleur Jeanquartier; Igor Jurisica; Andreas Holzinger
Journal:  BMC Cancer       Date:  2018-04-12       Impact factor: 4.430

Review 6.  NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment.

Authors:  Antreas Afantitis; Georgia Melagraki; Panagiotis Isigonis; Andreas Tsoumanis; Dimitra Danai Varsou; Eugenia Valsami-Jones; Anastasios Papadiamantis; Laura-Jayne A Ellis; Haralambos Sarimveis; Philip Doganis; Pantelis Karatzas; Periklis Tsiros; Irene Liampa; Vladimir Lobaskin; Dario Greco; Angela Serra; Pia Anneli Sofia Kinaret; Laura Aliisa Saarimäki; Roland Grafström; Pekka Kohonen; Penny Nymark; Egon Willighagen; Tomasz Puzyn; Anna Rybinska-Fryca; Alexander Lyubartsev; Keld Alstrup Jensen; Jan Gerit Brandenburg; Stephen Lofts; Claus Svendsen; Samuel Harrison; Dieter Maier; Kaido Tamm; Jaak Jänes; Lauri Sikk; Maria Dusinska; Eleonora Longhin; Elise Rundén-Pran; Espen Mariussen; Naouale El Yamani; Wolfgang Unger; Jörg Radnik; Alexander Tropsha; Yoram Cohen; Jerzy Leszczynski; Christine Ogilvie Hendren; Mark Wiesner; David Winkler; Noriyuki Suzuki; Tae Hyun Yoon; Jang-Sik Choi; Natasha Sanabria; Mary Gulumian; Iseult Lynch
Journal:  Comput Struct Biotechnol J       Date:  2020-03-07       Impact factor: 7.271

  6 in total

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