Literature DB >> 24765005

N-Methyl-2-(1,2,3,4-tetra-hydro-naph-thalen-1-yl-idene)hydrazinecarbo-thio-amide.

Adriano Bof de Oliveira1, Bárbara Regina Santos Feitosa1, Christian Näther2, Inke Jess2.   

Abstract

There are two independent mol-ecules in the asymmetric unit of the title compound, C12H15N3S, both of which display disorder of several C atoms in the N-bound ring (occupancy ratios of 0.75:0.25 in the first independent mol-ecule and 0.50:0.50 in the second) with the methyl H atoms also being disordered in the first mol-ecule (occupancy ratio of 0.70:0.30). The planes of the benzene ring and the N-N-C-N fragment make dihedral angles of 12.92 (14)° in the first independent mol-ecule and 7.60 (13)° in the second. In the crystal, mol-ecules are linked by weak N-H⋯S hydrogen bonds into chains along the a-axis direction. The crystal packing ressembles a herringbone arrangement.

Entities:  

Year:  2014        PMID: 24765005      PMCID: PMC3998428          DOI: 10.1107/S1600536814003079

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, coordination chemistry and biological activity of thio­semicarbazones, see: Lobana et al. (2009 ▶). For one of the first reports of the synthesis of thio­semicarbazone derivatives, see: Freund & Schander (1902 ▶).

Experimental

Crystal data

C12H15N3S M = 233.33 Triclinic, a = 10.6234 (6) Å b = 10.9425 (6) Å c = 11.0576 (6) Å α = 73.685 (4)° β = 79.152 (4)° γ = 88.614 (4)° V = 1211.04 (12) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 200 K 0.2 × 0.1 × 0.1 mm

Data collection

Stoe IPDS-1 diffractometer 11521 measured reflections 5125 independent reflections 4111 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.114 S = 1.06 5125 reflections 334 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.42 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814003079/bt6960sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814003079/bt6960Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814003079/bt6960Isup3.cml CCDC reference: 986205 Additional supporting information: crystallographic information; 3D view; checkCIF report
C12H15N3SZ = 4
Mr = 233.33F(000) = 496
Triclinic, P1Dx = 1.280 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.6234 (6) ÅCell parameters from 11521 reflections
b = 10.9425 (6) Åθ = 1.9–27.0°
c = 11.0576 (6) ŵ = 0.24 mm1
α = 73.685 (4)°T = 200 K
β = 79.152 (4)°Block, white
γ = 88.614 (4)°0.2 × 0.1 × 0.1 mm
V = 1211.04 (12) Å3
Stoe IPDS-1 diffractometer4111 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube, Stoe IPDS-1Rint = 0.031
Graphite monochromatorθmax = 27.0°, θmin = 1.9°
φ scansh = −13→12
11521 measured reflectionsk = −13→13
5125 independent reflectionsl = −14→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0541P)2 + 0.2784P] where P = (Fo2 + 2Fc2)/3
5125 reflections(Δ/σ)max = 0.001
334 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.48672 (15)0.18650 (14)0.58968 (14)0.0359 (3)
C20.5663 (2)0.2436 (2)0.65971 (16)0.0585 (5)
H2A0.54650.33480.64610.070*0.75
H2B0.65810.23850.62290.070*0.75
H2C0.59930.32920.60570.070*0.25
H2D0.64060.18960.67720.070*0.25
C30.5434 (3)0.1769 (3)0.8050 (2)0.0523 (6)0.75
H3A0.57850.09040.82050.063*0.75
H3B0.58780.22590.84830.063*0.75
C40.4004 (7)0.1680 (7)0.8593 (8)0.0515 (13)0.75
H4A0.36340.25360.84000.062*0.75
H4B0.38440.13030.95350.062*0.75
C3'0.4840 (13)0.2542 (11)0.7888 (8)0.074 (3)0.25
H3C0.53980.27870.84110.088*0.25
H3D0.41960.32070.77150.088*0.25
C4'0.420 (3)0.133 (2)0.858 (3)0.071 (7)0.25
H4C0.48680.06990.88060.085*0.25
H4D0.36830.14110.93920.085*0.25
C50.34020 (17)0.08243 (17)0.79474 (15)0.0456 (4)
C60.24021 (19)−0.00422 (19)0.86362 (18)0.0570 (5)
H60.2117−0.01320.95250.068*
C70.18239 (19)−0.07657 (18)0.8054 (2)0.0582 (5)
H70.1152−0.13590.85420.070*
C80.22184 (17)−0.06331 (16)0.67515 (19)0.0497 (4)
H80.1809−0.11260.63450.060*
C90.32074 (15)0.02177 (14)0.60490 (16)0.0396 (3)
H90.34790.03070.51590.048*
C100.38118 (15)0.09484 (13)0.66391 (14)0.0350 (3)
N10.50410 (13)0.21270 (11)0.46681 (12)0.0354 (3)
N20.60085 (15)0.29850 (14)0.39563 (12)0.0430 (3)
H20.652 (2)0.3371 (19)0.431 (2)0.056 (6)*
C110.62069 (17)0.32887 (15)0.26515 (14)0.0420 (4)
S10.73841 (6)0.43493 (5)0.17704 (4)0.06437 (17)
N30.54320 (15)0.27078 (15)0.21718 (13)0.0441 (3)
H30.486 (2)0.215 (2)0.272 (2)0.057 (6)*
C120.5478 (2)0.2904 (2)0.08134 (17)0.0624 (5)
H12A0.48430.23340.06930.094*0.70
H12B0.63360.27190.04100.094*0.70
H12C0.52850.37900.04180.094*0.70
H12D0.61330.35610.03210.094*0.30
H12E0.46400.31770.06040.094*0.30
H12F0.56910.21050.05960.094*0.30
C211.03532 (14)0.72157 (13)0.43323 (14)0.0345 (3)
C220.98459 (18)0.80910 (17)0.32295 (15)0.0463 (4)
H22A0.97990.89630.33300.056*0.50
H22B0.89680.78010.32380.056*0.50
H22C1.03700.88930.29050.056*0.50
H22D0.89540.83050.35360.056*0.50
C231.0710 (4)0.8118 (3)0.1933 (3)0.0439 (7)0.50
H23A1.02730.85830.12310.053*0.50
H23B1.15170.85960.18470.053*0.50
C23'0.9870 (4)0.7468 (4)0.2094 (3)0.0527 (9)0.50
H23C0.91610.68240.23390.063*0.50
H23D0.97200.81350.13240.063*0.50
C241.1012 (3)0.6896 (3)0.1790 (2)0.0752 (7)
H24A1.16380.69940.09810.090*0.50
H24B1.02250.64810.17130.090*0.50
H24C1.16620.75780.13070.090*0.50
H24D1.08910.63920.12020.090*0.50
C251.15584 (17)0.60384 (17)0.28740 (17)0.0451 (4)
C261.23846 (19)0.50776 (19)0.2683 (2)0.0562 (5)
H261.26180.49670.18480.067*
C271.28696 (19)0.42841 (18)0.3681 (2)0.0571 (5)
H271.34340.36330.35330.069*
C281.25370 (17)0.44333 (17)0.4896 (2)0.0518 (4)
H281.28720.38850.55850.062*
C291.17199 (15)0.53750 (15)0.51113 (17)0.0424 (4)
H291.14880.54680.59530.051*
C301.12244 (14)0.61990 (14)0.41059 (14)0.0352 (3)
N211.00717 (13)0.72885 (12)0.54928 (12)0.0378 (3)
N220.92325 (15)0.81998 (13)0.57445 (13)0.0417 (3)
H220.883 (2)0.8683 (19)0.517 (2)0.055 (6)*
C310.87550 (17)0.81552 (16)0.69932 (15)0.0420 (4)
S210.76008 (5)0.91523 (5)0.73333 (5)0.05696 (15)
N230.92760 (17)0.73086 (15)0.78559 (13)0.0475 (3)
H230.985 (2)0.683 (2)0.762 (2)0.059 (6)*
C320.8857 (2)0.7063 (2)0.92353 (17)0.0637 (6)
H32A0.89080.78580.94700.096*
H32B0.94110.64370.96820.096*
H32C0.79690.67300.94830.096*
U11U22U33U12U13U23
C10.0370 (8)0.0407 (7)0.0292 (7)−0.0037 (6)−0.0035 (6)−0.0102 (6)
C20.0602 (12)0.0828 (13)0.0308 (8)−0.0339 (10)−0.0013 (8)−0.0151 (8)
C30.0488 (15)0.0784 (19)0.0313 (11)−0.0160 (13)−0.0046 (10)−0.0188 (12)
C40.056 (2)0.069 (4)0.0309 (16)−0.015 (2)0.0027 (16)−0.022 (2)
C3'0.106 (9)0.081 (6)0.036 (4)−0.049 (6)0.009 (5)−0.029 (4)
C4'0.107 (14)0.068 (12)0.031 (5)−0.022 (8)0.022 (7)−0.023 (7)
C50.0455 (10)0.0531 (9)0.0329 (8)−0.0093 (7)−0.0038 (7)−0.0048 (7)
C60.0531 (11)0.0669 (12)0.0377 (9)−0.0157 (9)−0.0003 (8)0.0026 (8)
C70.0479 (11)0.0510 (10)0.0615 (12)−0.0149 (8)−0.0065 (9)0.0059 (8)
C80.0417 (9)0.0410 (8)0.0666 (11)−0.0041 (7)−0.0151 (9)−0.0117 (8)
C90.0355 (8)0.0406 (8)0.0439 (8)0.0026 (6)−0.0093 (7)−0.0127 (6)
C100.0343 (8)0.0354 (7)0.0327 (7)0.0005 (6)−0.0065 (6)−0.0052 (6)
N10.0377 (7)0.0373 (6)0.0296 (6)−0.0036 (5)−0.0033 (5)−0.0084 (5)
N20.0479 (8)0.0508 (8)0.0276 (6)−0.0152 (6)−0.0011 (6)−0.0093 (5)
C110.0476 (10)0.0462 (8)0.0291 (7)−0.0023 (7)−0.0021 (7)−0.0088 (6)
S10.0763 (4)0.0707 (3)0.0348 (2)−0.0303 (3)0.0012 (2)−0.0016 (2)
N30.0461 (8)0.0577 (8)0.0271 (6)−0.0038 (7)−0.0032 (6)−0.0119 (6)
C120.0653 (13)0.0932 (15)0.0298 (8)−0.0070 (11)−0.0084 (8)−0.0189 (9)
C210.0342 (8)0.0374 (7)0.0304 (7)−0.0045 (6)−0.0047 (6)−0.0078 (6)
C220.0542 (11)0.0497 (9)0.0317 (8)0.0123 (8)−0.0068 (7)−0.0079 (7)
C230.0446 (19)0.0546 (19)0.0265 (14)−0.0051 (15)−0.0023 (13)−0.0039 (13)
C23'0.059 (2)0.069 (2)0.0328 (16)0.016 (2)−0.0152 (16)−0.0156 (16)
C240.0950 (18)0.0995 (17)0.0404 (10)0.0374 (14)−0.0212 (11)−0.0322 (11)
C250.0414 (9)0.0532 (9)0.0446 (9)0.0016 (7)−0.0067 (7)−0.0210 (7)
C260.0478 (11)0.0641 (11)0.0641 (12)0.0030 (9)−0.0033 (9)−0.0347 (10)
C270.0423 (10)0.0481 (10)0.0848 (14)0.0060 (8)−0.0100 (10)−0.0267 (9)
C280.0390 (9)0.0434 (9)0.0697 (12)0.0016 (7)−0.0139 (9)−0.0085 (8)
C290.0361 (9)0.0424 (8)0.0460 (9)−0.0040 (6)−0.0085 (7)−0.0073 (7)
C300.0284 (7)0.0380 (7)0.0385 (8)−0.0057 (6)−0.0039 (6)−0.0107 (6)
N210.0401 (7)0.0409 (7)0.0331 (6)0.0004 (5)−0.0065 (5)−0.0118 (5)
N220.0489 (8)0.0447 (7)0.0316 (6)0.0046 (6)−0.0058 (6)−0.0123 (5)
C310.0448 (9)0.0472 (8)0.0358 (8)−0.0119 (7)−0.0016 (7)−0.0172 (7)
S210.0551 (3)0.0707 (3)0.0517 (3)0.0034 (2)−0.0019 (2)−0.0334 (2)
N230.0555 (10)0.0538 (8)0.0313 (7)−0.0079 (7)−0.0036 (6)−0.0114 (6)
C320.0733 (14)0.0818 (14)0.0308 (8)−0.0207 (11)−0.0003 (9)−0.0119 (8)
C1—N11.2851 (19)C12—H12E0.9800
C1—C101.477 (2)C12—H12F0.9800
C1—C21.499 (2)C21—N211.2863 (19)
C2—C31.541 (3)C21—C301.475 (2)
C2—C3'1.560 (9)C21—C221.504 (2)
C2—H2A0.9900C22—C231.543 (3)
C2—H2B0.9900C22—C23'1.584 (4)
C2—H2C0.9900C22—H22A0.9900
C2—H2D0.9900C22—H22B0.9900
C3—C41.519 (8)C22—H22C0.9900
C3—H3A0.9900C22—H22D0.9900
C3—H3B0.9900C23—C241.412 (4)
C4—C51.540 (6)C23—H23A0.9900
C4—H4A0.9900C23—H23B0.9900
C4—H4B0.9900C23'—C241.380 (4)
C3'—C4'1.45 (3)C23'—H23C0.9900
C3'—H3C0.9900C23'—H23D0.9900
C3'—H3D0.9900C24—C251.502 (3)
C4'—C51.41 (3)C24—H24A0.9900
C4'—H4C0.9900C24—H24B0.9900
C4'—H4D0.9900C24—H24C0.9900
C5—C61.395 (2)C24—H24D0.9900
C5—C101.399 (2)C25—C261.390 (3)
C6—C71.370 (3)C25—C301.401 (2)
C6—H60.9500C26—C271.375 (3)
C7—C81.389 (3)C26—H260.9500
C7—H70.9500C27—C281.377 (3)
C8—C91.381 (2)C27—H270.9500
C8—H80.9500C28—C291.374 (3)
C9—C101.398 (2)C28—H280.9500
C9—H90.9500C29—C301.400 (2)
N1—N21.3727 (18)C29—H290.9500
N2—C111.362 (2)N21—N221.373 (2)
N2—H20.90 (2)N22—C311.366 (2)
C11—N31.320 (2)N22—H220.88 (2)
C11—S11.6841 (17)C31—N231.324 (2)
N3—C121.448 (2)C31—S211.6816 (18)
N3—H30.88 (2)N23—C321.455 (2)
C12—H12A0.9800N23—H230.85 (2)
C12—H12B0.9800C32—H32A0.9800
C12—H12C0.9800C32—H32B0.9800
C12—H12D0.9800C32—H32C0.9800
N1—C1—C10116.87 (13)H12D—C12—H12F109.5
N1—C1—C2123.86 (14)H12E—C12—H12F109.5
C10—C1—C2119.27 (13)N21—C21—C30116.47 (13)
C1—C2—C3113.13 (16)N21—C21—C22123.90 (14)
C1—C2—C3'110.1 (4)C30—C21—C22119.63 (13)
C1—C2—H2A109.0C21—C22—C23111.25 (18)
C3—C2—H2A109.0C21—C22—C23'111.96 (18)
C1—C2—H2B109.0C21—C22—H22A109.4
C3—C2—H2B109.0C23—C22—H22A109.4
H2A—C2—H2B107.8C23'—C22—H22A136.4
C1—C2—H2C109.6C21—C22—H22B109.4
C3—C2—H2C134.0C23—C22—H22B109.4
C3'—C2—H2C109.6C23'—C22—H22B70.4
C1—C2—H2D109.6H22A—C22—H22B108.0
C3'—C2—H2D109.6C21—C22—H22C109.2
H2A—C2—H2D136.7C23—C22—H22C70.8
H2C—C2—H2D108.2C23'—C22—H22C109.2
C4—C3—C2109.4 (4)H22B—C22—H22C137.9
C4—C3—H3A109.8C21—C22—H22D109.2
C2—C3—H3A109.8C23'—C22—H22D109.2
C4—C3—H3B109.8H22C—C22—H22D107.9
C2—C3—H3B109.8C24—C23—C22113.7 (2)
H3A—C3—H3B108.2C24—C23—H23A108.8
C3—C4—C5106.5 (4)C22—C23—H23A108.8
C3—C4—H4A110.4C24—C23—H23B108.8
C5—C4—H4A110.4C22—C23—H23B108.8
C3—C4—H4B110.4H23A—C23—H23B107.7
C5—C4—H4B110.4C24—C23'—C22113.0 (3)
H4A—C4—H4B108.6C24—C23'—H23C109.0
C4'—C3'—C2109.1 (11)C22—C23'—H23C109.0
C4'—C3'—H3C109.9C24—C23'—H23D109.0
C2—C3'—H3C109.9C22—C23'—H23D109.0
C4'—C3'—H3D109.9H23C—C23'—H23D107.8
C2—C3'—H3D109.9C23'—C24—C25117.8 (2)
H3C—C3'—H3D108.3C23—C24—C25114.3 (2)
C5—C4'—C3'116.9 (19)C23'—C24—H24A133.1
C5—C4'—H4C108.1C23—C24—H24A108.7
C3'—C4'—H4C108.1C25—C24—H24A108.7
C5—C4'—H4D108.1C23—C24—H24B108.7
C3'—C4'—H4D108.1C25—C24—H24B108.7
H4C—C4'—H4D107.3H24A—C24—H24B107.6
C6—C5—C10118.82 (16)C23'—C24—H24C107.9
C6—C5—C4'121.1 (11)C25—C24—H24C107.9
C10—C5—C4'118.1 (11)H24B—C24—H24C141.8
C6—C5—C4120.9 (3)C23'—C24—H24D107.9
C10—C5—C4120.2 (3)C23—C24—H24D137.6
C4'—C5—C416.3 (11)C25—C24—H24D107.9
C7—C6—C5121.20 (17)H24C—C24—H24D107.2
C7—C6—H6119.4C26—C25—C30119.05 (17)
C5—C6—H6119.4C26—C25—C24121.30 (17)
C6—C7—C8120.10 (16)C30—C25—C24119.65 (16)
C6—C7—H7119.9C27—C26—C25121.11 (19)
C8—C7—H7119.9C27—C26—H26119.4
C9—C8—C7119.78 (16)C25—C26—H26119.4
C9—C8—H8120.1C26—C27—C28120.03 (17)
C7—C8—H8120.1C26—C27—H27120.0
C8—C9—C10120.45 (16)C28—C27—H27120.0
C8—C9—H9119.8C29—C28—C27120.02 (18)
C10—C9—H9119.8C29—C28—H28120.0
C9—C10—C5119.64 (14)C27—C28—H28120.0
C9—C10—C1120.94 (14)C28—C29—C30120.82 (17)
C5—C10—C1119.41 (14)C28—C29—H29119.6
C1—N1—N2117.98 (13)C30—C29—H29119.6
C11—N2—N1119.22 (14)C29—C30—C25118.97 (15)
C11—N2—H2117.8 (13)C29—C30—C21120.96 (14)
N1—N2—H2123.0 (13)C25—C30—C21120.07 (14)
N3—C11—N2115.75 (14)C21—N21—N22117.99 (13)
N3—C11—S1124.70 (12)C31—N22—N21118.72 (14)
N2—C11—S1119.54 (13)C31—N22—H22115.9 (14)
C11—N3—C12124.39 (15)N21—N22—H22123.3 (14)
C11—N3—H3117.7 (14)N23—C31—N22115.30 (16)
C12—N3—H3117.9 (14)N23—C31—S21124.95 (13)
N3—C12—H12A109.5N22—C31—S21119.74 (13)
N3—C12—H12B109.5C31—N23—C32123.87 (18)
H12A—C12—H12B109.5C31—N23—H23120.0 (15)
N3—C12—H12C109.5C32—N23—H23116.0 (15)
H12A—C12—H12C109.5N23—C32—H32A109.5
H12B—C12—H12C109.5N23—C32—H32B109.5
N3—C12—H12D109.5H32A—C32—H32B109.5
N3—C12—H12E109.5N23—C32—H32C109.5
H12D—C12—H12E109.5H32A—C32—H32C109.5
N3—C12—H12F109.5H32B—C32—H32C109.5
D—H···AD—HH···AD···AD—H···A
N3—H3···S21i0.88 (2)3.03 (2)3.7226 (15)138.0
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3⋯S21i 0.88 (2)3.03 (2)3.7226 (15)138.0

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  A new example of intra-molecular C-H⋯Ni anagostic inter-actions: synthesis, crystal structure and Hirshfeld analysis of cis-bis-[4-methyl-2-(1,2,3,4-tetra-hydro-naphthalen-1-yl-idene)hydrazinecarbo-thio-amidato-κ2N1,S]nickel(II) di-methyl-formamide monosolvate.

Authors:  Adriano Bof de Oliveira; Johannes Beck; Sônia Elizabeth Brown S Mellone; Jörg Daniels
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-05-19

2.  Crystal structure of N-ethyl-2-(1,2,3,4-tetra-hydro-naphthalen-1-yl-idene)hydrazinecarbo-thio-amide.

Authors:  Adriano Bof de Oliveira; Johannes Beck; Christian Landvogt; Renan Lira de Farias; Bárbara Regina Santos Feitoza
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-01-31
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.