| Literature DB >> 24764999 |
Joel T Mague1, Alaa A-M Abdel-Aziz2, Adel S El-Azab3, Magda A El-Sherbeny4.
Abstract
The title compound, C15H12N2O4S, is V-shaped with the isoindoline ring system (r.m.s. deviation = 0.006 Å) inclined to the benzene ring by 84.27 (13)°. In the crystal, inversion dimers are formed via pairwise N-H⋯O hydrogen bonds. These dimers associate further into corrugated ribbons, via pairwise N-H⋯O and C-H⋯O hydrogen bonds, propagating along the a-axis direction and lying parallel to (001).Entities:
Year: 2014 PMID: 24764999 PMCID: PMC3998451 DOI: 10.1107/S1600536814002803
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H12N2O4S | |
| Monoclinic, | Cu |
| Cell parameters from 9982 reflections | |
| θ = 3.3–69.7° | |
| µ = 2.33 mm−1 | |
| β = 90.804 (1)° | |
| Plate, colourless | |
| 0.27 × 0.07 × 0.02 mm |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 2533 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 2277 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 69.7°, θmin = 3.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 22413 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2533 reflections | (Δ/σ)max < 0.001 |
| 207 parameters | Δρmax = 0.35 e Å−3 |
| 60 restraints | Δρmin = −0.48 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.34446 (12) | 0.06815 (2) | 0.37785 (6) | 0.01772 (16) | |
| O1 | 0.8787 (4) | 0.29938 (7) | 0.42647 (19) | 0.0289 (5) | |
| O2 | 0.2038 (4) | 0.33953 (7) | 0.70508 (18) | 0.0270 (4) | |
| O3 | 0.2231 (4) | 0.03320 (7) | 0.46699 (18) | 0.0234 (4) | |
| O4 | 0.1931 (4) | 0.08113 (7) | 0.26280 (17) | 0.0228 (4) | |
| N1 | 0.5522 (4) | 0.30797 (8) | 0.5821 (2) | 0.0196 (5) | |
| N2 | 0.6245 (5) | 0.04320 (9) | 0.3351 (2) | 0.0213 (5) | |
| H2A | 0.699 (7) | 0.0253 (13) | 0.399 (3) | 0.036 (9)* | |
| H2B | 0.734 (7) | 0.0629 (13) | 0.291 (3) | 0.035 (9)* | |
| C1 | 0.6940 (5) | 0.32243 (10) | 0.4720 (2) | 0.0203 (5) | |
| C2 | 0.5700 (5) | 0.37076 (10) | 0.4278 (2) | 0.0195 (5) | |
| C3 | 0.6315 (5) | 0.40119 (10) | 0.3228 (3) | 0.0250 (6) | |
| H3 | 0.7724 | 0.3928 | 0.2653 | 0.030* | |
| C4 | 0.4774 (6) | 0.44466 (10) | 0.3052 (3) | 0.0277 (6) | |
| H4 | 0.5141 | 0.4665 | 0.2344 | 0.033* | |
| C5 | 0.2713 (6) | 0.45654 (10) | 0.3897 (3) | 0.0291 (6) | |
| H5 | 0.1695 | 0.4864 | 0.3754 | 0.035* | |
| C6 | 0.2107 (6) | 0.42563 (10) | 0.4950 (3) | 0.0254 (6) | |
| H6 | 0.0700 | 0.4337 | 0.5528 | 0.030* | |
| C7 | 0.3644 (5) | 0.38266 (9) | 0.5114 (2) | 0.0194 (5) | |
| C8 | 0.3516 (5) | 0.34265 (10) | 0.6129 (2) | 0.0195 (5) | |
| C9 | 0.6122 (6) | 0.26288 (10) | 0.6576 (3) | 0.0224 (6) | |
| H9A | 0.5115 | 0.2643 | 0.7400 | 0.027* | |
| H9B | 0.8060 | 0.2627 | 0.6803 | 0.027* | |
| C10 | 0.5424 (5) | 0.21422 (10) | 0.5873 (2) | 0.0200 (5) | |
| C11 | 0.6909 (5) | 0.17103 (10) | 0.6137 (3) | 0.0229 (6) | |
| H11 | 0.8343 | 0.1723 | 0.6757 | 0.027* | |
| C12 | 0.6324 (5) | 0.12619 (10) | 0.5508 (3) | 0.0222 (6) | |
| H12 | 0.7363 | 0.0969 | 0.5682 | 0.027* | |
| C13 | 0.4197 (5) | 0.12451 (9) | 0.4619 (2) | 0.0179 (5) | |
| C14 | 0.2657 (5) | 0.16688 (10) | 0.4370 (3) | 0.0212 (6) | |
| H14 | 0.1191 | 0.1653 | 0.3769 | 0.025* | |
| C15 | 0.3270 (5) | 0.21161 (10) | 0.5003 (3) | 0.0229 (6) | |
| H15 | 0.2208 | 0.2407 | 0.4841 | 0.027* |
| S1 | 0.0184 (3) | 0.0157 (3) | 0.0191 (3) | −0.0011 (2) | −0.0001 (2) | 0.0007 (2) |
| O1 | 0.0278 (11) | 0.0321 (11) | 0.0269 (10) | 0.0094 (9) | 0.0047 (8) | 0.0021 (9) |
| O2 | 0.0296 (10) | 0.0318 (11) | 0.0197 (10) | 0.0032 (8) | 0.0056 (8) | 0.0010 (8) |
| O3 | 0.0224 (10) | 0.0206 (9) | 0.0272 (10) | −0.0019 (7) | 0.0032 (8) | 0.0046 (8) |
| O4 | 0.0249 (10) | 0.0214 (9) | 0.0219 (9) | −0.0009 (7) | −0.0054 (7) | 0.0002 (8) |
| N1 | 0.0235 (11) | 0.0175 (11) | 0.0177 (11) | 0.0008 (9) | −0.0002 (9) | 0.0004 (9) |
| N2 | 0.0221 (12) | 0.0201 (12) | 0.0218 (12) | −0.0002 (9) | 0.0009 (10) | 0.0003 (10) |
| C1 | 0.0221 (13) | 0.0216 (13) | 0.0171 (13) | 0.0005 (10) | −0.0007 (10) | −0.0004 (10) |
| C2 | 0.0197 (13) | 0.0201 (13) | 0.0185 (13) | −0.0024 (10) | −0.0027 (10) | −0.0014 (10) |
| C3 | 0.0240 (14) | 0.0282 (15) | 0.0228 (14) | −0.0051 (11) | −0.0005 (11) | 0.0029 (12) |
| C4 | 0.0346 (16) | 0.0235 (14) | 0.0249 (14) | −0.0083 (12) | −0.0063 (12) | 0.0068 (12) |
| C5 | 0.0393 (17) | 0.0173 (13) | 0.0303 (15) | 0.0034 (12) | −0.0098 (13) | 0.0008 (12) |
| C6 | 0.0302 (15) | 0.0219 (14) | 0.0239 (14) | 0.0061 (11) | −0.0043 (11) | −0.0042 (11) |
| C7 | 0.0223 (13) | 0.0176 (12) | 0.0183 (13) | −0.0009 (10) | −0.0044 (10) | −0.0008 (10) |
| C8 | 0.0220 (13) | 0.0185 (13) | 0.0178 (13) | −0.0001 (10) | −0.0026 (10) | −0.0043 (10) |
| C9 | 0.0288 (14) | 0.0195 (13) | 0.0189 (13) | 0.0029 (11) | −0.0031 (11) | 0.0021 (10) |
| C10 | 0.0243 (13) | 0.0204 (13) | 0.0155 (12) | 0.0008 (10) | 0.0022 (10) | 0.0006 (10) |
| C11 | 0.0269 (14) | 0.0226 (13) | 0.0189 (13) | 0.0022 (11) | −0.0058 (11) | 0.0024 (11) |
| C12 | 0.0247 (14) | 0.0186 (13) | 0.0232 (14) | 0.0037 (11) | −0.0035 (11) | 0.0018 (11) |
| C13 | 0.0196 (13) | 0.0176 (12) | 0.0165 (12) | −0.0015 (10) | 0.0029 (10) | 0.0023 (10) |
| C14 | 0.0213 (13) | 0.0223 (13) | 0.0199 (13) | 0.0006 (10) | −0.0027 (10) | 0.0016 (11) |
| C15 | 0.0258 (14) | 0.0192 (13) | 0.0237 (14) | 0.0044 (11) | −0.0028 (11) | 0.0005 (11) |
| S1—O4 | 1.4350 (18) | C5—C6 | 1.394 (4) |
| S1—O3 | 1.4419 (18) | C5—H5 | 0.9500 |
| S1—N2 | 1.610 (2) | C6—C7 | 1.382 (4) |
| S1—C13 | 1.764 (3) | C6—H6 | 0.9500 |
| O1—C1 | 1.205 (3) | C7—C8 | 1.490 (4) |
| O2—C8 | 1.211 (3) | C9—C10 | 1.517 (4) |
| N1—C1 | 1.396 (3) | C9—H9A | 0.9900 |
| N1—C8 | 1.397 (3) | C9—H9B | 0.9900 |
| N1—C9 | 1.454 (3) | C10—C15 | 1.388 (4) |
| N2—H2A | 0.89 (4) | C10—C11 | 1.389 (4) |
| N2—H2B | 0.88 (3) | C11—C12 | 1.383 (4) |
| C1—C2 | 1.491 (4) | C11—H11 | 0.9500 |
| C2—C7 | 1.382 (4) | C12—C13 | 1.390 (4) |
| C2—C3 | 1.385 (4) | C12—H12 | 0.9500 |
| C3—C4 | 1.396 (4) | C13—C14 | 1.382 (4) |
| C3—H3 | 0.9500 | C14—C15 | 1.386 (4) |
| C4—C5 | 1.390 (4) | C14—H14 | 0.9500 |
| C4—H4 | 0.9500 | C15—H15 | 0.9500 |
| O4—S1—O3 | 117.22 (11) | C6—C7—C2 | 121.7 (2) |
| O4—S1—N2 | 108.72 (12) | C6—C7—C8 | 130.1 (2) |
| O3—S1—N2 | 106.35 (12) | C2—C7—C8 | 108.1 (2) |
| O4—S1—C13 | 107.77 (11) | O2—C8—N1 | 125.2 (2) |
| O3—S1—C13 | 108.78 (11) | O2—C8—C7 | 128.9 (2) |
| N2—S1—C13 | 107.65 (12) | N1—C8—C7 | 105.9 (2) |
| C1—N1—C8 | 111.9 (2) | N1—C9—C10 | 113.7 (2) |
| C1—N1—C9 | 123.8 (2) | N1—C9—H9A | 108.8 |
| C8—N1—C9 | 124.3 (2) | C10—C9—H9A | 108.8 |
| S1—N2—H2A | 112 (2) | N1—C9—H9B | 108.8 |
| S1—N2—H2B | 116 (2) | C10—C9—H9B | 108.8 |
| H2A—N2—H2B | 116 (3) | H9A—C9—H9B | 107.7 |
| O1—C1—N1 | 125.0 (2) | C15—C10—C11 | 119.3 (2) |
| O1—C1—C2 | 129.3 (2) | C15—C10—C9 | 121.2 (2) |
| N1—C1—C2 | 105.7 (2) | C11—C10—C9 | 119.4 (2) |
| C7—C2—C3 | 121.7 (2) | C12—C11—C10 | 120.7 (2) |
| C7—C2—C1 | 108.3 (2) | C12—C11—H11 | 119.7 |
| C3—C2—C1 | 130.0 (2) | C10—C11—H11 | 119.7 |
| C2—C3—C4 | 117.1 (3) | C11—C12—C13 | 119.3 (2) |
| C2—C3—H3 | 121.5 | C11—C12—H12 | 120.4 |
| C4—C3—H3 | 121.5 | C13—C12—H12 | 120.4 |
| C5—C4—C3 | 121.1 (3) | C14—C13—C12 | 120.8 (2) |
| C5—C4—H4 | 119.5 | C14—C13—S1 | 119.0 (2) |
| C3—C4—H4 | 119.5 | C12—C13—S1 | 120.22 (19) |
| C4—C5—C6 | 121.4 (3) | C13—C14—C15 | 119.4 (2) |
| C4—C5—H5 | 119.3 | C13—C14—H14 | 120.3 |
| C6—C5—H5 | 119.3 | C15—C14—H14 | 120.3 |
| C7—C6—C5 | 117.0 (3) | C14—C15—C10 | 120.6 (2) |
| C7—C6—H6 | 121.5 | C14—C15—H15 | 119.7 |
| C5—C6—H6 | 121.5 | C10—C15—H15 | 119.7 |
| C8—N1—C1—O1 | 179.0 (3) | C2—C7—C8—O2 | 178.4 (3) |
| C9—N1—C1—O1 | 0.7 (4) | C6—C7—C8—N1 | 179.6 (3) |
| C8—N1—C1—C2 | −0.5 (3) | C2—C7—C8—N1 | −0.9 (3) |
| C9—N1—C1—C2 | −178.9 (2) | C1—N1—C9—C10 | −70.0 (3) |
| O1—C1—C2—C7 | −179.6 (3) | C8—N1—C9—C10 | 111.9 (3) |
| N1—C1—C2—C7 | −0.1 (3) | N1—C9—C10—C15 | −32.3 (4) |
| O1—C1—C2—C3 | 1.0 (5) | N1—C9—C10—C11 | 149.9 (2) |
| N1—C1—C2—C3 | −179.5 (3) | C15—C10—C11—C12 | 2.4 (4) |
| C7—C2—C3—C4 | 0.3 (4) | C9—C10—C11—C12 | −179.8 (2) |
| C1—C2—C3—C4 | 179.7 (3) | C10—C11—C12—C13 | −1.0 (4) |
| C2—C3—C4—C5 | −0.1 (4) | C11—C12—C13—C14 | −0.6 (4) |
| C3—C4—C5—C6 | 0.1 (4) | C11—C12—C13—S1 | 178.8 (2) |
| C4—C5—C6—C7 | −0.1 (4) | O4—S1—C13—C14 | 20.6 (2) |
| C5—C6—C7—C2 | 0.2 (4) | O3—S1—C13—C14 | −107.4 (2) |
| C5—C6—C7—C8 | 179.7 (3) | N2—S1—C13—C14 | 137.7 (2) |
| C3—C2—C7—C6 | −0.3 (4) | O4—S1—C13—C12 | −158.8 (2) |
| C1—C2—C7—C6 | −179.8 (2) | O3—S1—C13—C12 | 73.2 (2) |
| C3—C2—C7—C8 | −179.9 (2) | N2—S1—C13—C12 | −41.7 (2) |
| C1—C2—C7—C8 | 0.6 (3) | C12—C13—C14—C15 | 0.8 (4) |
| C1—N1—C8—O2 | −178.4 (2) | S1—C13—C14—C15 | −178.5 (2) |
| C9—N1—C8—O2 | −0.1 (4) | C13—C14—C15—C10 | 0.5 (4) |
| C1—N1—C8—C7 | 0.9 (3) | C11—C10—C15—C14 | −2.1 (4) |
| C9—N1—C8—C7 | 179.2 (2) | C9—C10—C15—C14 | −179.9 (2) |
| C6—C7—C8—O2 | −1.2 (5) |
| H··· | ||||
| N2—H2 | 0.89 (4) | 2.11 (4) | 2.963 (3) | 162 (3) |
| N2—H2 | 0.88 (3) | 2.36 (3) | 3.105 (3) | 142 (3) |
| C15—H15···O1iii | 0.95 | 2.38 | 3.307 (3) | 166 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.89 (4) | 2.11 (4) | 2.963 (3) | 162 (3) |
| N2—H2 | 0.88 (3) | 2.36 (3) | 3.105 (3) | 142 (3) |
| C15—H15⋯O1iii | 0.95 | 2.38 | 3.307 (3) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) .