Literature DB >> 24764969

Methyl 3-phenyl-isoxazole-5-carboxyl-ate.

Li Wang1, Ya-Jun Li1, Yao-Dong Li1, Wei Zhang1, Rui Xu1.   

Abstract

In the title compound, C11H9NO3, the dihedral angle between the isoxazole and phenyl rings is 19.79 (12), while the ester group is inclined to the isoxazole group by 12.14 (6)°. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds, forming layers lying parallel to (010).

Entities:  

Year:  2014        PMID: 24764969      PMCID: PMC3998439          DOI: 10.1107/S1600536814000038

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of isoxazole derivatives, see: Musad et al. (2011 ▶). For the synthesis and the structure of a related compound, see: Wang et al. (2013 ▶).

Experimental

Crystal data

C11H9NO3 M = 203.19 Monoclinic, a = 12.2275 (18) Å b = 13.604 (2) Å c = 5.8746 (9) Å β = 97.011 (3)° V = 969.9 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.36 × 0.25 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.964, T max = 0.987 4807 measured reflections 1718 independent reflections 1238 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.133 S = 1.13 1718 reflections 138 parameters H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.15 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97, PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814000038/su2682sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814000038/su2682Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814000038/su2682Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C11H9NO3Z = 4
Mr = 203.19F(000) = 424
Monoclinic, P21/cDx = 1.392 Mg m3
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 12.2275 (18) Åθ = 1.7–25.1°
b = 13.604 (2) ŵ = 0.10 mm1
c = 5.8746 (9) ÅT = 296 K
β = 97.011 (3)°Plate, colourless
V = 969.9 (3) Å30.36 × 0.25 × 0.13 mm
Bruker APEXII CCD diffractometer1718 independent reflections
Radiation source: fine-focus sealed tube1238 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.036
phi and ω scansθmax = 25.1°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −14→10
Tmin = 0.964, Tmax = 0.987k = −15→16
4807 measured reflectionsl = −6→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.059H-atom parameters constrained
wR(F2) = 0.133w = 1/[σ2(Fo2) + (0.0531P)2] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
1718 reflectionsΔρmax = 0.17 e Å3
138 parametersΔρmin = −0.15 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0049 (19)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.58165 (16)0.12445 (15)0.1263 (4)0.0548 (6)
O10.69685 (13)0.12779 (12)0.1714 (3)0.0568 (5)
O20.91297 (15)0.11346 (15)0.3629 (3)0.0734 (7)
O30.85964 (13)0.14679 (13)0.7065 (3)0.0601 (5)
C10.3828 (2)0.15075 (17)0.5374 (4)0.0497 (7)
H10.42980.17420.66200.060*
C20.2707 (2)0.14652 (19)0.5489 (5)0.0581 (7)
H20.24260.16770.68070.070*
C30.2004 (2)0.11121 (19)0.3669 (5)0.0593 (8)
H30.12490.10880.37460.071*
C40.2428 (2)0.07947 (19)0.1727 (5)0.0585 (7)
H40.19560.05460.05010.070*
C50.35431 (19)0.08422 (18)0.1585 (4)0.0495 (7)
H50.38200.06320.02610.059*
C60.42544 (18)0.12036 (15)0.3418 (4)0.0419 (6)
C70.54474 (18)0.12641 (15)0.3261 (4)0.0404 (6)
C90.72372 (19)0.13278 (17)0.4011 (4)0.0447 (6)
C100.63299 (18)0.13246 (16)0.5065 (4)0.0451 (6)
H100.62860.13550.66330.054*
C110.8426 (2)0.13030 (18)0.4824 (5)0.0511 (7)
C120.9720 (2)0.1372 (2)0.8127 (5)0.0722 (9)
H12A1.00150.07550.76940.108*
H12B0.97370.13970.97640.108*
H12C1.01540.19000.76290.108*
U11U22U33U12U13U23
N10.0377 (12)0.0773 (16)0.0498 (14)−0.0009 (10)0.0068 (10)−0.0028 (11)
O10.0444 (11)0.0800 (13)0.0475 (11)−0.0009 (9)0.0119 (8)−0.0010 (9)
O20.0451 (11)0.1176 (18)0.0603 (13)0.0086 (11)0.0184 (9)0.0003 (11)
O30.0400 (10)0.0877 (14)0.0523 (12)0.0010 (9)0.0044 (8)−0.0068 (10)
C10.0448 (15)0.0555 (16)0.0492 (16)−0.0026 (12)0.0074 (12)−0.0066 (12)
C20.0490 (17)0.0677 (18)0.0603 (18)0.0044 (13)0.0173 (13)−0.0047 (14)
C30.0363 (14)0.0689 (19)0.073 (2)0.0013 (13)0.0078 (14)0.0140 (15)
C40.0425 (16)0.0702 (18)0.0598 (19)−0.0053 (13)−0.0062 (13)0.0057 (14)
C50.0455 (15)0.0563 (15)0.0466 (16)0.0009 (12)0.0054 (12)−0.0007 (12)
C60.0406 (14)0.0411 (13)0.0438 (14)0.0013 (10)0.0039 (11)0.0035 (11)
C70.0412 (14)0.0371 (13)0.0427 (14)0.0005 (10)0.0040 (11)−0.0020 (11)
C90.0441 (15)0.0497 (15)0.0405 (14)−0.0008 (11)0.0057 (11)0.0024 (11)
C100.0427 (14)0.0525 (15)0.0407 (14)0.0043 (12)0.0075 (11)−0.0007 (11)
C110.0451 (16)0.0565 (16)0.0529 (17)0.0014 (12)0.0108 (13)0.0010 (13)
C120.0457 (17)0.104 (2)0.0639 (19)0.0039 (15)−0.0067 (14)−0.0015 (17)
N1—C71.308 (3)C4—C51.378 (3)
N1—O11.402 (2)C4—H40.9300
O1—C91.351 (3)C5—C61.389 (3)
O2—C111.197 (3)C5—H50.9300
O3—C111.326 (3)C6—C71.475 (3)
O3—C121.443 (3)C7—C101.420 (3)
C1—C61.382 (3)C9—C101.335 (3)
C1—C21.382 (3)C9—C111.474 (3)
C1—H10.9300C10—H100.9300
C2—C31.374 (4)C12—H12A0.9600
C2—H20.9300C12—H12B0.9600
C3—C41.379 (4)C12—H12C0.9600
C3—H30.9300
C7—N1—O1106.16 (18)C5—C6—C7120.1 (2)
C9—O1—N1107.86 (17)N1—C7—C10110.9 (2)
C11—O3—C12116.1 (2)N1—C7—C6120.5 (2)
C6—C1—C2120.3 (2)C10—C7—C6128.6 (2)
C6—C1—H1119.8C10—C9—O1110.4 (2)
C2—C1—H1119.8C10—C9—C11133.8 (2)
C3—C2—C1120.4 (3)O1—C9—C11115.6 (2)
C3—C2—H2119.8C9—C10—C7104.6 (2)
C1—C2—H2119.8C9—C10—H10127.7
C2—C3—C4119.4 (2)C7—C10—H10127.7
C2—C3—H3120.3O2—C11—O3125.2 (2)
C4—C3—H3120.3O2—C11—C9124.4 (3)
C5—C4—C3120.7 (2)O3—C11—C9110.3 (2)
C5—C4—H4119.7O3—C12—H12A109.5
C3—C4—H4119.7O3—C12—H12B109.5
C4—C5—C6120.0 (2)H12A—C12—H12B109.5
C4—C5—H5120.0O3—C12—H12C109.5
C6—C5—H5120.0H12A—C12—H12C109.5
C1—C6—C5119.1 (2)H12B—C12—H12C109.5
C1—C6—C7120.8 (2)
C7—N1—O1—C9−0.7 (3)C5—C6—C7—C10−159.5 (2)
C6—C1—C2—C30.6 (4)N1—O1—C9—C100.2 (3)
C1—C2—C3—C40.3 (4)N1—O1—C9—C11176.1 (2)
C2—C3—C4—C5−1.0 (4)O1—C9—C10—C70.2 (3)
C3—C4—C5—C60.7 (4)C11—C9—C10—C7−174.6 (3)
C2—C1—C6—C5−0.9 (3)N1—C7—C10—C9−0.7 (3)
C2—C1—C6—C7178.8 (2)C6—C7—C10—C9177.9 (2)
C4—C5—C6—C10.3 (3)C12—O3—C11—O2−4.0 (4)
C4—C5—C6—C7−179.4 (2)C12—O3—C11—C9174.4 (2)
O1—N1—C7—C100.8 (3)C10—C9—C11—O2166.0 (3)
O1—N1—C7—C6−177.87 (18)O1—C9—C11—O2−8.7 (4)
C1—C6—C7—N1−160.8 (2)C10—C9—C11—O3−12.4 (4)
C5—C6—C7—N118.9 (3)O1—C9—C11—O3172.9 (2)
C1—C6—C7—C1020.8 (4)
D—H···AD—HH···AD···AD—H···A
C3—H3···O2i0.932.583.512 (3)175
C12—H12B···O2ii0.962.503.412 (3)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯O2i 0.932.583.512 (3)175
C12—H12B⋯O2ii 0.962.503.412 (3)159

Symmetry codes: (i) ; (ii) .

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2.  Synthesis and evaluation of antioxidant and antibacterial activities of new substituted bis(1,3,4-oxadiazoles), 3,5-bis(substituted) pyrazoles and isoxazoles.

Authors:  Ebraheem Abdu Musad; Riyaz Mohamed; Bahjat Ali Saeed; Bannikuppe S Vishwanath; K M Lokanatha Rai
Journal:  Bioorg Med Chem Lett       Date:  2011-05-06       Impact factor: 2.823

3.  Isopropyl 3-phenyl-isoxazole-5-carboxyl-ate.

Authors:  Li Wang; Xue-Ying Liu; Zheng-Wei Li; Sheng-Yong Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-13

4.  Structure validation in chemical crystallography.

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