Literature DB >> 24764863

2,6-Bis(4-meth-oxy-phen-yl)-1,4-dithiine.

Sha-Sha Zhao1, Qiong Su1, Zhi-Hong Peng1, De-Lie An1.   

Abstract

The title mol-ecule, C18H16O2S2, reveals crystallographic twofold rotation symmetry (with both S atoms lying on the axis) and one half-mol-ecule defines an asymmetric unit. The dithiine ring is in a boat conformation. The aromatic ring and the C=C bond are nearly coplanar, with small torsion angles of -171.26 (19) and 8.5 (3)°. The two S-C bond lengths [1.7391 (19) and 1.7795 (18) Å] are shorter than single C-S bonds and longer than analogous C=S double bonds, which indicates a certain degree of conjugation between the lone pair on the S atom and π electrons of the C=C bond. The crystal packing only features van der Waals inter-actions.

Entities:  

Year:  2014        PMID: 24764863      PMCID: PMC3998302          DOI: 10.1107/S1600536814000397

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a similar crystal structure, 2,6-diphenyl-1,4-dithiine, see: Piao et al. (2004 ▶). For background to 1,4-dithiine derivatives, see: Kobayashi & Gajurel (1986 ▶); Scott et al. (2000 ▶). For the synthesis of a similar compound, see: Nakayama et al. (1984 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C18H16O2S2 M = 328.43 Orthorhombic, a = 10.1330 (11) Å b = 27.318 (3) Å c = 5.5402 (6) Å V = 1533.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 293 K 0.21 × 0.18 × 0.09 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.121, T max = 1.000 8513 measured reflections 1541 independent reflections 1258 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.102 S = 1.04 1541 reflections 104 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814000397/kp2462sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814000397/kp2462Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814000397/kp2462Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C18H16O2S2F(000) = 688
Mr = 328.43Dx = 1.422 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 1658 reflections
a = 10.1330 (11) Åθ = 7.5–53.8°
b = 27.318 (3) ŵ = 0.35 mm1
c = 5.5402 (6) ÅT = 293 K
V = 1533.6 (3) Å3Prismatic, yellow
Z = 40.21 × 0.18 × 0.09 mm
Bruker SMART CCD area-detector diffractometer1541 independent reflections
Radiation source: fine-focus sealed tube1258 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
phi and ω scansθmax = 26.0°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −12→12
Tmin = 0.121, Tmax = 1.000k = −33→32
8513 measured reflectionsl = −5→6
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0554P)2 + 0.3159P] where P = (Fo2 + 2Fc2)/3
1541 reflections(Δ/σ)max < 0.001
104 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.49280 (7)0.25000.16602 (12)0.0352 (2)
S20.70856 (7)0.2500−0.24173 (15)0.0423 (2)
O10.14361 (14)0.45648 (5)0.0468 (3)0.0484 (4)
C10.60102 (19)0.29896 (6)−0.2021 (4)0.0364 (5)
H10.61150.3262−0.30110.044*
C20.50486 (19)0.29989 (6)−0.0393 (3)0.0307 (4)
C30.40701 (18)0.33990 (6)−0.0143 (3)0.0296 (4)
C40.3199 (2)0.34206 (7)0.1786 (4)0.0364 (5)
H40.32130.31720.29310.044*
C50.2311 (2)0.38017 (7)0.2059 (3)0.0372 (5)
H50.17460.38080.33810.045*
C60.22660 (19)0.41714 (7)0.0376 (3)0.0352 (5)
C70.31115 (19)0.41530 (7)−0.1595 (4)0.0395 (5)
H70.30830.4399−0.27530.047*
C80.3984 (2)0.37754 (7)−0.1841 (4)0.0371 (5)
H80.45370.3769−0.31800.044*
C90.0549 (2)0.45883 (8)0.2462 (5)0.0556 (6)
H9A0.00050.43010.24790.083*
H9B0.00020.48740.23110.083*
H9C0.10430.46060.39380.083*
U11U22U33U12U13U23
S10.0430 (4)0.0328 (4)0.0297 (4)0.000−0.0017 (3)0.000
S20.0266 (4)0.0405 (4)0.0599 (5)0.0000.0101 (3)0.000
O10.0487 (9)0.0401 (8)0.0563 (10)0.0129 (7)0.0112 (7)0.0073 (7)
C10.0326 (10)0.0306 (9)0.0459 (12)−0.0035 (8)0.0042 (9)0.0016 (8)
C20.0304 (9)0.0287 (9)0.0332 (11)−0.0063 (8)−0.0021 (8)−0.0015 (7)
C30.0290 (10)0.0274 (9)0.0324 (10)−0.0058 (8)−0.0013 (8)−0.0028 (7)
C40.0416 (11)0.0314 (9)0.0361 (11)−0.0007 (8)0.0067 (8)0.0043 (8)
C50.0397 (11)0.0362 (10)0.0357 (11)0.0002 (9)0.0093 (9)0.0000 (8)
C60.0333 (10)0.0305 (10)0.0420 (11)−0.0001 (8)−0.0015 (9)−0.0015 (8)
C70.0421 (11)0.0382 (10)0.0381 (11)0.0000 (9)0.0019 (9)0.0095 (9)
C80.0383 (11)0.0397 (10)0.0331 (11)0.0004 (9)0.0062 (8)0.0030 (8)
C90.0548 (14)0.0493 (13)0.0627 (15)0.0180 (11)0.0168 (12)0.0019 (12)
S1—C21.7795 (18)C4—C51.384 (3)
S1—C2i1.7795 (18)C4—H40.9300
S2—C11.7391 (19)C5—C61.375 (3)
S2—C1i1.7391 (19)C5—H50.9300
O1—C61.365 (2)C6—C71.389 (3)
O1—C91.426 (3)C7—C81.365 (3)
C1—C21.328 (3)C7—H70.9300
C1—H10.9300C8—H80.9300
C2—C31.482 (3)C9—H9A0.9600
C3—C41.387 (3)C9—H9B0.9600
C3—C81.397 (3)C9—H9C0.9600
C2—S1—C2i99.97 (12)C4—C5—H5120.0
C1—S2—C1i100.54 (13)O1—C6—C5124.98 (18)
C6—O1—C9116.92 (16)O1—C6—C7115.96 (17)
C2—C1—S2124.07 (15)C5—C6—C7119.06 (18)
C2—C1—H1118.0C8—C7—C6120.36 (18)
S2—C1—H1118.0C8—C7—H7119.8
C1—C2—C3124.65 (16)C6—C7—H7119.8
C1—C2—S1118.03 (15)C7—C8—C3121.97 (18)
C3—C2—S1117.32 (14)C7—C8—H8119.0
C4—C3—C8116.60 (17)C3—C8—H8119.0
C4—C3—C2121.94 (16)O1—C9—H9A109.5
C8—C3—C2121.46 (16)O1—C9—H9B109.5
C5—C4—C3121.98 (17)H9A—C9—H9B109.5
C5—C4—H4119.0O1—C9—H9C109.5
C3—C4—H4119.0H9A—C9—H9C109.5
C6—C5—C4120.00 (18)H9B—C9—H9C109.5
C6—C5—H5120.0
C1i—S2—C1—C239.0 (2)C3—C4—C5—C60.6 (3)
S2—C1—C2—C3−175.75 (14)C9—O1—C6—C5−0.4 (3)
S2—C1—C2—S14.9 (2)C9—O1—C6—C7179.31 (19)
C2i—S1—C2—C1−48.1 (2)C4—C5—C6—O1−179.75 (18)
C2i—S1—C2—C3132.49 (11)C4—C5—C6—C70.6 (3)
C1—C2—C3—C4−171.26 (19)O1—C6—C7—C8179.64 (18)
S1—C2—C3—C48.1 (2)C5—C6—C7—C8−0.7 (3)
C1—C2—C3—C88.5 (3)C6—C7—C8—C3−0.5 (3)
S1—C2—C3—C8−172.18 (14)C4—C3—C8—C71.6 (3)
C8—C3—C4—C5−1.7 (3)C2—C3—C8—C7−178.16 (18)
C2—C3—C4—C5178.07 (17)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,3-Dihydro-dithiin and -dithiepine-1,1,4,4-tetroxides: small molecule non-peptide antagonists of the human galanin hGAL-1 receptor.

Authors:  M K Scott; T M Ross; D H Lee; H Y Wang; R P Shank; K D Wild; C B Davis; J J Crooke; A C Potocki; A B Reitz
Journal:  Bioorg Med Chem       Date:  2000-06       Impact factor: 3.641

  2 in total

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