Literature DB >> 24764851

1,3,5-Tri-p-tolyl-pentane-1,5-diol.

A Thiruvalluvar1, R Chithiravel2, S Muthusubramanian3, R J Butcher4.   

Abstract

In the title compound, C26H30O2, the central benzene ring forms dihedral angles of 14.85 (15) and 28.17 (14)° with the terminal benzene rings. The dihedral angle between the terminal benzene rings is 32.14 (13)°. The crystal packing exhibits two strong inter-molecular O-H⋯O hydrogen bonds, forming directed four-membered co-operative rings. A region of disordered electron density, most probably disordered ethyl acetate solvent mol-ecules, occupying voids of ca 519 Å(3) for an electron count of 59, was treated using the SQUEEZE routine in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148-155]. Their formula mass and unit-cell characteristics were not taken into account during refinement. The structure was refined as an inversion twin [absolute structure parameter = -0.3 (4)].

Entities:  

Year:  2014        PMID: 24764851      PMCID: PMC3998290          DOI: 10.1107/S160053681400018X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the procedure adopted to reduce 1,3,5-tris­(p-tol­yl)pentane-1,5-dione, see: Paul et al. (2012 ▶). For a less green reported synthesis of the starting diketone, 1,3,5-tris­(p-tol­yl)pentane-1,5-dione, see: Yang et al. (2005 ▶). For applications of related compounds, see: Sundberg & Faergemann (2008 ▶). For the crystal structures of related compounds, see: Ha & Young (2009 ▶); Barrett et al. (2000 ▶). For details of the use of the SQUEEZE and CAVITY routines in PLATON, see: Spek (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C26H30O2 M = 374.50 Trigonal, a = 14.6205 (5) Å c = 20.2672 (6) Å V = 3751.9 (3) Å3 Z = 6 Mo Kα radiation μ = 0.06 mm−1 T = 123 K 0.98 × 0.66 × 0.17 mm

Data collection

Agilent Xcalibur Ruby Gemini diffractometer Absorption correction: analytical [CrysAlis PRO (Agilent, 2012 ▶), using a multifaceted crystal model (Clark & Reid, 1995 ▶)] T min = 0.957, T max = 0.990 35176 measured reflections 7200 independent reflections 5765 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.193 S = 1.08 7200 reflections 258 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.24 e Å−3 Absolute structure: Flack parameter determined using 2073 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▶) Absolute structure parameter: −0.3 (4) Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR2011 (Burla et al., 2012 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL2013 and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681400018X/su2686sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681400018X/su2686Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681400018X/su2686Isup3.cdx Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681400018X/su2686Isup4.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C26H30O2Dx = 0.994 Mg m3
Mr = 374.50Melting point: 373(2) K
Trigonal, P3121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 31 2"Cell parameters from 10976 reflections
a = 14.6205 (5) Åθ = 3.2–30.9°
c = 20.2672 (6) ŵ = 0.06 mm1
V = 3751.9 (3) Å3T = 123 K
Z = 6Plate, colourless
F(000) = 12120.98 × 0.66 × 0.17 mm
Agilent Xcalibur Ruby Gemini diffractometer7200 independent reflections
Radiation source: Enhance (Mo) X-ray Source5765 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
Detector resolution: 10.5081 pixels mm-1θmax = 30.9°, θmin = 3.2°
ω scansh = −20→18
Absorption correction: analytical [CrysAlis PRO (Agilent, 2012), using a multifaceted crystal model (Clark & Reid, 1995)]k = −13→19
Tmin = 0.957, Tmax = 0.990l = −28→26
35176 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H-atom parameters constrained
wR(F2) = 0.193w = 1/[σ2(Fo2) + (0.1162P)2 + 0.2294P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
7200 reflectionsΔρmax = 0.32 e Å3
258 parametersΔρmin = −0.24 e Å3
0 restraintsAbsolute structure: Flack parameter determined using 2073 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: −0.3 (4)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
xyzUiso*/Ueq
O10.55511 (15)0.01657 (13)0.24921 (8)0.0403 (5)
O50.53998 (13)0.37108 (12)0.01023 (8)0.0342 (4)
C10.5100 (2)0.00501 (17)0.18436 (10)0.0318 (6)
C20.54021 (19)0.11650 (16)0.16162 (10)0.0317 (6)
C30.49968 (18)0.12147 (16)0.09253 (11)0.0300 (5)
C40.53487 (19)0.23812 (17)0.07835 (11)0.0319 (6)
C50.49703 (18)0.25811 (17)0.01230 (10)0.0302 (5)
C110.5478 (2)−0.04987 (17)0.13833 (11)0.0339 (6)
C120.6544 (2)−0.0129 (2)0.12939 (15)0.0483 (8)
C130.6873 (3)−0.0652 (3)0.08777 (17)0.0600 (10)
C140.6155 (3)−0.1550 (2)0.05386 (15)0.0557 (8)
C150.5101 (3)−0.1911 (2)0.06246 (14)0.0498 (8)
C160.4758 (2)−0.13936 (19)0.10424 (12)0.0404 (7)
C170.6518 (4)−0.2152 (3)0.0109 (2)0.0859 (15)
C310.38070 (19)0.04976 (17)0.08632 (11)0.0322 (6)
C320.3383 (2)−0.02456 (19)0.03540 (12)0.0397 (7)
C330.2302 (3)−0.0923 (2)0.03095 (16)0.0539 (9)
C340.1600 (2)−0.0889 (3)0.07530 (16)0.0571 (9)
C350.2037 (3)−0.0131 (3)0.12548 (17)0.0622 (10)
C360.3115 (2)0.0543 (2)0.13062 (14)0.0481 (8)
C370.0412 (3)−0.1620 (4)0.0702 (2)0.0889 (16)
C510.53006 (17)0.22032 (16)−0.04816 (10)0.0292 (5)
C520.6275 (2)0.2274 (2)−0.05428 (13)0.0433 (7)
C530.6561 (2)0.1949 (2)−0.11143 (15)0.0492 (8)
C540.5862 (3)0.1539 (2)−0.16445 (13)0.0468 (8)
C550.4884 (3)0.1454 (2)−0.15807 (12)0.0451 (8)
C560.46012 (19)0.17721 (18)−0.10069 (12)0.0354 (6)
C570.6178 (3)0.1197 (3)−0.22690 (16)0.0670 (11)
H10.43133−0.038130.187940.0382*
H1A0.52364−0.041490.269180.0605*
H2A0.618150.160840.161950.0380*
H2B0.512020.147170.193750.0380*
H30.534680.097830.059740.0360*
H4A0.508460.264750.114240.0382*
H4B0.612990.279570.079380.0382*
H50.418210.222840.013130.0363*
H5A0.512380.38632−0.021100.0513*
H120.704970.048790.151980.0580*
H130.76073−0.039200.082200.0720*
H150.45977−0.252380.039490.0598*
H160.40227−0.165460.109550.0485*
H17A0.59274−0.26614−0.016240.1289*
H17B0.67692−0.252820.038890.1289*
H17C0.70936−0.16569−0.017750.1289*
H320.38386−0.028670.003640.0476*
H330.20335−0.14266−0.003760.0647*
H350.15810−0.007870.156750.0745*
H360.338330.104730.165310.0577*
H37A0.01162−0.132000.039370.1333*
H37B0.00906−0.169740.113810.1333*
H37C0.02635−0.231370.054240.1333*
H520.676160.25504−0.018680.0519*
H530.723680.20062−0.114310.0590*
H550.439480.11734−0.193500.0542*
H560.391730.16933−0.097320.0425*
H57A0.692710.14053−0.224480.1001*
H57B0.606090.15363−0.265110.1001*
H57C0.575110.04281−0.231480.1001*
U11U22U33U12U13U23
O10.0659 (10)0.0270 (7)0.0187 (7)0.0162 (7)−0.0097 (7)0.0014 (6)
O50.0541 (8)0.0381 (7)0.0228 (7)0.0324 (5)0.0016 (6)0.0036 (6)
C10.0456 (11)0.0261 (9)0.0183 (9)0.0138 (8)−0.0049 (8)0.0008 (8)
C20.0488 (11)0.0275 (9)0.0201 (9)0.0200 (7)−0.0071 (8)−0.0015 (8)
C30.0446 (10)0.0301 (9)0.0172 (9)0.0201 (7)−0.0031 (8)−0.0016 (7)
C40.0493 (11)0.0324 (9)0.0173 (9)0.0229 (8)−0.0018 (8)0.0010 (8)
C50.0408 (10)0.0349 (9)0.0200 (9)0.0227 (7)0.0022 (8)0.0040 (8)
C110.0524 (12)0.0316 (9)0.0208 (10)0.0233 (8)−0.0057 (9)0.0030 (8)
C120.0599 (14)0.0438 (12)0.0459 (15)0.0294 (10)−0.0116 (12)0.0005 (11)
C130.0758 (17)0.0673 (15)0.0563 (19)0.0503 (12)0.0013 (15)0.0070 (14)
C140.1000 (17)0.0589 (12)0.0368 (14)0.0612 (10)0.0034 (13)0.0063 (11)
C150.0887 (17)0.0421 (11)0.0316 (12)0.0424 (10)−0.0113 (12)−0.0054 (10)
C160.0628 (13)0.0343 (10)0.0281 (11)0.0272 (9)−0.0091 (10)−0.0010 (9)
C170.135 (3)0.0825 (18)0.079 (3)0.0834 (15)0.012 (2)−0.0041 (19)
C310.0447 (10)0.0322 (9)0.0206 (10)0.0198 (8)−0.0021 (8)0.0023 (8)
C320.0535 (13)0.0381 (10)0.0250 (11)0.0210 (9)−0.0023 (10)−0.0008 (9)
C330.0650 (17)0.0467 (14)0.0375 (15)0.0186 (12)−0.0141 (13)−0.0031 (11)
C340.0486 (15)0.0633 (18)0.0431 (15)0.0157 (13)−0.0014 (12)0.0070 (14)
C350.0505 (15)0.081 (2)0.0465 (17)0.0265 (14)0.0079 (13)0.0019 (16)
C360.0528 (14)0.0574 (14)0.0322 (13)0.0262 (11)−0.0015 (11)−0.0078 (12)
C370.057 (2)0.095 (3)0.076 (3)0.009 (2)−0.0101 (19)0.001 (2)
C510.0420 (10)0.0292 (8)0.0196 (9)0.0201 (7)0.0035 (8)0.0036 (7)
C520.0462 (12)0.0551 (13)0.0317 (12)0.0277 (10)−0.0022 (10)−0.0068 (11)
C530.0489 (12)0.0564 (14)0.0455 (15)0.0287 (10)0.0068 (11)−0.0089 (12)
C540.0685 (15)0.0443 (12)0.0270 (12)0.0278 (11)0.0097 (11)−0.0023 (10)
C550.0658 (16)0.0429 (12)0.0218 (11)0.0235 (11)−0.0053 (11)−0.0040 (9)
C560.0425 (11)0.0367 (10)0.0281 (11)0.0206 (8)−0.0003 (9)0.0012 (9)
C570.090 (2)0.0742 (19)0.0391 (16)0.0428 (15)0.0168 (15)−0.0107 (14)
O1—C11.442 (3)C54—C571.515 (5)
O5—C51.445 (3)C55—C561.390 (4)
O1—H1A0.8400C1—H11.0000
O5—H5A0.8400C2—H2A0.9900
C1—C111.504 (4)C2—H2B0.9900
C1—C21.531 (3)C3—H31.0000
C2—C31.536 (3)C4—H4A0.9900
C3—C41.542 (3)C4—H4B0.9900
C3—C311.522 (4)C5—H51.0000
C4—C51.531 (3)C12—H120.9500
C5—C511.519 (3)C13—H130.9500
C11—C161.386 (3)C15—H150.9500
C11—C121.383 (4)C16—H160.9500
C12—C131.377 (5)C17—H17A0.9800
C13—C141.386 (5)C17—H17B0.9800
C14—C171.511 (6)C17—H17C0.9800
C14—C151.368 (6)C32—H320.9500
C15—C161.386 (5)C33—H330.9500
C31—C321.399 (3)C35—H350.9500
C31—C361.379 (4)C36—H360.9500
C32—C331.386 (5)C37—H37A0.9800
C33—C341.384 (5)C37—H37B0.9800
C34—C351.401 (5)C37—H37C0.9800
C34—C371.521 (6)C52—H520.9500
C35—C361.383 (5)C53—H530.9500
C51—C561.390 (3)C55—H550.9500
C51—C521.381 (4)C56—H560.9500
C52—C531.393 (4)C57—H57A0.9800
C53—C541.395 (4)C57—H57B0.9800
C54—C551.378 (7)C57—H57C0.9800
C1—O1—H1A109.00C4—C3—H3108.00
C5—O5—H5A109.00C31—C3—H3108.00
C2—C1—C11113.19 (19)C3—C4—H4A109.00
O1—C1—C2106.14 (17)C3—C4—H4B109.00
O1—C1—C11111.1 (2)C5—C4—H4A109.00
C1—C2—C3114.33 (17)C5—C4—H4B109.00
C2—C3—C31112.19 (19)H4A—C4—H4B108.00
C4—C3—C31112.4 (2)O5—C5—H5109.00
C2—C3—C4107.39 (17)C4—C5—H5109.00
C3—C4—C5114.92 (18)C51—C5—H5109.00
O5—C5—C51110.92 (17)C11—C12—H12120.00
O5—C5—C4104.57 (17)C13—C12—H12120.00
C4—C5—C51115.1 (2)C12—C13—H13119.00
C12—C11—C16118.7 (3)C14—C13—H13119.00
C1—C11—C12121.0 (2)C14—C15—H15120.00
C1—C11—C16120.3 (3)C16—C15—H15120.00
C11—C12—C13120.1 (3)C11—C16—H16120.00
C12—C13—C14121.4 (4)C15—C16—H16120.00
C15—C14—C17120.3 (3)C14—C17—H17A109.00
C13—C14—C15118.4 (3)C14—C17—H17B109.00
C13—C14—C17121.2 (4)C14—C17—H17C109.00
C14—C15—C16120.9 (3)H17A—C17—H17B109.00
C11—C16—C15120.6 (3)H17A—C17—H17C110.00
C3—C31—C36121.8 (2)H17B—C17—H17C109.00
C3—C31—C32120.4 (2)C31—C32—H32120.00
C32—C31—C36117.8 (3)C33—C32—H32120.00
C31—C32—C33120.5 (3)C32—C33—H33119.00
C32—C33—C34122.2 (3)C34—C33—H33119.00
C35—C34—C37120.9 (3)C34—C35—H35119.00
C33—C34—C37122.5 (3)C36—C35—H35119.00
C33—C34—C35116.5 (3)C31—C36—H36119.00
C34—C35—C36121.7 (4)C35—C36—H36119.00
C31—C36—C35121.3 (3)C34—C37—H37A109.00
C52—C51—C56117.6 (2)C34—C37—H37B109.00
C5—C51—C52123.3 (2)C34—C37—H37C110.00
C5—C51—C56119.2 (2)H37A—C37—H37B109.00
C51—C52—C53121.6 (3)H37A—C37—H37C110.00
C52—C53—C54120.4 (3)H37B—C37—H37C109.00
C53—C54—C57120.4 (4)C51—C52—H52119.00
C53—C54—C55118.1 (3)C53—C52—H52119.00
C55—C54—C57121.5 (3)C52—C53—H53120.00
C54—C55—C56121.1 (3)C54—C53—H53120.00
C51—C56—C55121.2 (3)C54—C55—H55119.00
O1—C1—H1109.00C56—C55—H55119.00
C2—C1—H1109.00C51—C56—H56119.00
C11—C1—H1109.00C55—C56—H56119.00
C1—C2—H2A109.00C54—C57—H57A109.00
C1—C2—H2B109.00C54—C57—H57B109.00
C3—C2—H2A109.00C54—C57—H57C109.00
C3—C2—H2B109.00H57A—C57—H57B109.00
H2A—C2—H2B108.00H57A—C57—H57C109.00
C2—C3—H3108.00H57B—C57—H57C109.00
O1—C1—C2—C3179.7 (2)C12—C13—C14—C150.1 (5)
C11—C1—C2—C357.6 (3)C12—C13—C14—C17−176.9 (3)
O1—C1—C11—C12−53.8 (3)C13—C14—C15—C16−0.2 (5)
O1—C1—C11—C16125.8 (2)C17—C14—C15—C16176.9 (3)
C2—C1—C11—C1265.4 (3)C14—C15—C16—C11−0.1 (4)
C2—C1—C11—C16−115.0 (3)C3—C31—C32—C33177.9 (2)
C1—C2—C3—C4178.8 (2)C36—C31—C32—C33−1.2 (4)
C1—C2—C3—C3154.8 (3)C3—C31—C36—C35−178.3 (3)
C2—C3—C4—C5−177.4 (2)C32—C31—C36—C350.7 (4)
C31—C3—C4—C5−53.5 (3)C31—C32—C33—C340.9 (5)
C2—C3—C31—C32−126.6 (2)C32—C33—C34—C35−0.1 (5)
C2—C3—C31—C3652.4 (3)C32—C33—C34—C37179.2 (3)
C4—C3—C31—C32112.3 (3)C33—C34—C35—C36−0.4 (5)
C4—C3—C31—C36−68.7 (3)C37—C34—C35—C36−179.7 (4)
C3—C4—C5—O5−179.6 (2)C34—C35—C36—C310.1 (5)
C3—C4—C5—C51−57.6 (3)C5—C51—C52—C53−177.9 (2)
O5—C5—C51—C5280.7 (3)C56—C51—C52—C531.4 (4)
O5—C5—C51—C56−98.7 (2)C5—C51—C56—C55177.4 (2)
C4—C5—C51—C52−37.8 (3)C52—C51—C56—C55−1.9 (3)
C4—C5—C51—C56142.9 (2)C51—C52—C53—C540.0 (4)
C1—C11—C12—C13179.0 (3)C52—C53—C54—C55−0.9 (4)
C16—C11—C12—C13−0.6 (4)C52—C53—C54—C57179.3 (3)
C1—C11—C16—C15−179.1 (2)C53—C54—C55—C560.4 (4)
C12—C11—C16—C150.5 (4)C57—C54—C55—C56−179.8 (3)
C11—C12—C13—C140.3 (5)C54—C55—C56—C511.1 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1A···O5i0.841.952.786 (3)174
O5—H5A···O1ii0.841.892.716 (3)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1A⋯O5i 0.841.952.786 (3)174
O5—H5A⋯O1ii 0.841.892.716 (3)170

Symmetry codes: (i) ; (ii) .

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