Literature DB >> 24764850

2-(3,4-Di-meth-oxy-phen-yl)-4-(thio-phen-2-yl)-2,3-di-hydro-1,5-benzo-thia-zepine.

B C Manjunath1, M Manjula1, K R Raghavendra2, S Shashikanth2, K Ajay Kumar3, N K Lokanath1.   

Abstract

In the title compound, C21H19NO2S2, the seven-membered thia-zepine ring adopts a slightly distorted twist boat conformation. The dihedral angle between the benzene rings is 67.4 (2)°. The mean plane of the thio-phene ring is twisted by 59.3 (2) and 87.7 (2)° from the mean planes of the benezene rings. In the crystal, inversion dimers linked by pairs of C-H⋯O hydrogen bonds generate R 2 (2)(20) loops.

Entities:  

Year:  2014        PMID: 24764850      PMCID: PMC3998289          DOI: 10.1107/S1600536813034612

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzo­phenone derivatives, see: Cutignano et al. (2003 ▶); Sanjeeva et al. (2008 ▶). For a related structure, see: Manjula et al. (2013 ▶).

Experimental

Crystal data

C21H19NO2S2 M = 381.51 Triclinic, a = 8.6188 (11) Å b = 9.7463 (15) Å c = 11.9018 (16) Å α = 100.308 (10)° β = 107.921 (9)° γ = 95.163 (11)° V = 924.6 (2) Å3 Z = 2 Cu Kα radiation μ = 2.73 mm−1 T = 296 K 0.21 × 0.20 × 0.20 mm

Data collection

Bruker X8 Proteum diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.598, T max = 0.611 7560 measured reflections 2999 independent reflections 2093 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.180 S = 1.07 2999 reflections 237 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006) ▶; software used to prepare material for publication: Mercury. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813034612/hb7177sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034612/hb7177Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034612/hb7177Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H19NO2S2Z = 2
Mr = 381.51F(000) = 400
Triclinic, P1Dx = 1.370 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 8.6188 (11) ÅCell parameters from 2999 reflections
b = 9.7463 (15) Åθ = 4.0–64.8°
c = 11.9018 (16) ŵ = 2.73 mm1
α = 100.308 (10)°T = 296 K
β = 107.921 (9)°Needle, light yellow
γ = 95.163 (11)°0.21 × 0.20 × 0.20 mm
V = 924.6 (2) Å3
Bruker X8 Proteum diffractometer2999 independent reflections
Radiation source: Bruker MicroStar microfocus rotating anode2093 reflections with I > 2σ(I)
Helios multilayer optics monochromatorRint = 0.051
Detector resolution: 10.7 pixels mm-1θmax = 64.8°, θmin = 4.0°
φ and ω scansh = −10→9
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −11→9
Tmin = 0.598, Tmax = 0.611l = −7→13
7560 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.180H-atom parameters constrained
S = 1.07 W = 1/[Σ2(FO2) + (0.0632P)2 + 0.4716P] WHERE P = (FO2 + 2FC2)/3
2999 reflections(Δ/σ)max < 0.001
237 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.39 e Å3
Experimental. m.p. 371 K. 1H NMR (CDCl3): δ 2.1 (d, 2H, C3—H), 3.80 (t, 1H, C2—H), 3.82 (s, 6H, -2OCH3), 6.52 (d, 1H, Ar—H), 6.64 (s, 1H, Ar—H), 7.0 (d, 1H, Ar—H), 7.1 (t, 1H, C5—H 5 m ring), 7.2–7.4 (m, 4H, Ar—H), 7.18 (t, 1H, C4—H 5 m ring), 7.46 (d, 1H, C3—H 5 m ring). Anal. Calcd. for C21H19NO2S2: C 66.11, H 5.02, N 3.67°; found C 66.10, H 4.98, N 3.68°. Mass FAB+ (NBA): 382 (M + 1, 100°).
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.27208 (13)0.30975 (11)−0.03322 (9)0.0585 (4)
S90.44948 (13)0.64057 (13)0.38801 (8)0.0588 (4)
O230.1945 (3)0.6524 (3)0.7567 (2)0.0571 (10)
O25−0.0298 (4)0.8108 (3)0.7090 (2)0.0627 (10)
N120.3407 (4)0.6027 (3)0.1072 (3)0.0497 (10)
C20.1374 (6)0.1581 (4)−0.0805 (4)0.0608 (14)
C30.0140 (6)0.1630 (5)−0.0311 (4)0.0632 (16)
C40.0329 (5)0.2921 (4)0.0500 (3)0.0523 (12)
C50.1673 (5)0.3849 (4)0.0577 (3)0.0466 (11)
C60.2239 (5)0.5289 (4)0.1278 (3)0.0449 (11)
C70.1393 (5)0.5875 (4)0.2153 (3)0.0480 (11)
C80.2257 (5)0.5754 (4)0.3433 (3)0.0449 (11)
C100.4599 (5)0.7707 (4)0.3043 (4)0.0535 (12)
C110.4061 (5)0.7396 (4)0.1762 (3)0.0527 (12)
C130.5351 (5)0.9073 (5)0.3660 (4)0.0701 (17)
C140.5566 (7)1.0118 (5)0.3038 (6)0.083 (2)
C150.5020 (7)0.9803 (5)0.1812 (6)0.088 (2)
C160.4288 (6)0.8464 (5)0.1171 (4)0.0670 (17)
C170.1517 (4)0.6436 (4)0.4359 (3)0.0431 (11)
C180.0340 (5)0.7296 (4)0.4125 (3)0.0515 (13)
C19−0.0315 (5)0.7881 (4)0.5006 (3)0.0556 (16)
C200.0245 (5)0.7594 (4)0.6157 (3)0.0482 (11)
C210.1444 (5)0.6730 (4)0.6401 (3)0.0444 (11)
C220.2054 (4)0.6162 (4)0.5510 (3)0.0413 (11)
C240.3247 (6)0.5738 (5)0.7876 (3)0.0632 (16)
C26−0.1737 (6)0.8744 (6)0.6826 (4)0.0759 (19)
H20.146100.07970−0.134400.0730*
H3−0.072400.08940−0.048900.0760*
H4−0.038000.312600.093700.0630*
H7A0.027200.537600.188500.0580*
H7B0.133200.686100.214100.0580*
H80.215000.474400.343100.0540*
H130.571600.929300.450100.0840*
H140.608101.102600.346100.0990*
H150.514401.050600.139700.1060*
H160.393900.826900.033000.0800*
H18−0.003400.749500.336000.0620*
H19−0.111900.845800.482600.0660*
H220.285000.557700.568500.0500*
H24A0.291200.479700.738600.0940*
H24B0.352400.570100.871400.0940*
H24C0.419300.618100.773800.0940*
H26A−0.150800.962700.661300.1140*
H26B−0.208700.890800.752500.1140*
H26C−0.259600.813100.616200.1140*
U11U22U33U12U13U23
S10.0629 (7)0.0656 (7)0.0458 (6)0.0136 (5)0.0226 (5)−0.0012 (5)
S90.0514 (6)0.0857 (8)0.0389 (5)0.0170 (5)0.0149 (4)0.0098 (5)
O230.0642 (18)0.090 (2)0.0267 (13)0.0294 (15)0.0199 (12)0.0196 (13)
O250.0651 (18)0.098 (2)0.0329 (14)0.0401 (16)0.0224 (13)0.0092 (14)
N120.0572 (19)0.0571 (19)0.0366 (16)0.0108 (15)0.0210 (15)0.0044 (14)
C20.070 (3)0.056 (2)0.050 (2)0.020 (2)0.013 (2)0.0028 (19)
C30.070 (3)0.055 (2)0.058 (3)0.007 (2)0.011 (2)0.015 (2)
C40.058 (2)0.062 (2)0.040 (2)0.0104 (19)0.0177 (18)0.0156 (18)
C50.053 (2)0.056 (2)0.0287 (17)0.0129 (18)0.0107 (16)0.0070 (16)
C60.049 (2)0.058 (2)0.0291 (17)0.0123 (17)0.0148 (16)0.0078 (16)
C70.052 (2)0.061 (2)0.0312 (18)0.0097 (18)0.0182 (16)0.0020 (16)
C80.053 (2)0.054 (2)0.0299 (18)0.0145 (17)0.0174 (16)0.0049 (16)
C100.048 (2)0.063 (2)0.049 (2)0.0130 (19)0.0210 (18)0.0002 (19)
C110.054 (2)0.061 (2)0.047 (2)0.0086 (19)0.0264 (19)0.0046 (19)
C130.055 (3)0.074 (3)0.067 (3)0.007 (2)0.019 (2)−0.017 (2)
C140.087 (4)0.060 (3)0.102 (4)0.004 (3)0.046 (3)−0.001 (3)
C150.099 (4)0.057 (3)0.132 (5)0.011 (3)0.074 (4)0.020 (3)
C160.082 (3)0.066 (3)0.072 (3)0.014 (2)0.048 (3)0.022 (2)
C170.048 (2)0.051 (2)0.0304 (18)0.0061 (17)0.0166 (15)0.0035 (15)
C180.067 (3)0.067 (2)0.0273 (17)0.026 (2)0.0173 (17)0.0169 (17)
C190.063 (3)0.070 (3)0.038 (2)0.030 (2)0.0177 (18)0.0111 (18)
C200.053 (2)0.062 (2)0.0316 (19)0.0152 (18)0.0184 (16)0.0042 (17)
C210.048 (2)0.057 (2)0.0303 (18)0.0107 (17)0.0154 (15)0.0094 (16)
C220.048 (2)0.054 (2)0.0247 (17)0.0152 (17)0.0128 (15)0.0107 (15)
C240.068 (3)0.091 (3)0.037 (2)0.032 (2)0.0165 (19)0.022 (2)
C260.062 (3)0.104 (4)0.055 (3)0.034 (3)0.020 (2)−0.011 (3)
S1—C21.685 (5)C17—C221.388 (5)
S1—C51.720 (4)C18—C191.397 (6)
S9—C81.853 (5)C19—C201.394 (5)
S9—C101.760 (4)C20—C211.386 (6)
O23—C211.378 (4)C21—C221.376 (5)
O23—C241.408 (6)C2—H20.9300
O25—C201.366 (5)C3—H30.9300
O25—C261.411 (6)C4—H40.9300
N12—C61.294 (5)C7—H7A0.9700
N12—C111.400 (5)C7—H7B0.9700
C2—C31.365 (7)C8—H80.9800
C3—C41.405 (6)C13—H130.9300
C4—C51.373 (6)C14—H140.9300
C5—C61.453 (5)C15—H150.9300
C6—C71.507 (6)C16—H160.9300
C7—C81.507 (5)C18—H180.9300
C8—C171.520 (5)C19—H190.9300
C10—C111.416 (6)C22—H220.9300
C10—C131.391 (6)C24—H24A0.9600
C11—C161.388 (6)C24—H24B0.9600
C13—C141.393 (7)C24—H24C0.9600
C14—C151.355 (9)C26—H26A0.9600
C15—C161.372 (7)C26—H26B0.9600
C17—C181.368 (6)C26—H26C0.9600
C2—S1—C591.9 (2)S1—C2—H2124.00
C8—S9—C10104.1 (2)C3—C2—H2124.00
C21—O23—C24116.8 (3)C2—C3—H3124.00
C20—O25—C26118.1 (3)C4—C3—H3124.00
C6—N12—C11120.1 (3)C3—C4—H4124.00
S1—C2—C3112.6 (3)C5—C4—H4124.00
C2—C3—C4112.1 (4)C6—C7—H7A109.00
C3—C4—C5112.7 (4)C6—C7—H7B109.00
S1—C5—C4110.7 (3)C8—C7—H7A109.00
S1—C5—C6120.3 (3)C8—C7—H7B109.00
C4—C5—C6129.0 (4)H7A—C7—H7B108.00
N12—C6—C5117.6 (4)S9—C8—H8107.00
N12—C6—C7123.3 (3)C7—C8—H8107.00
C5—C6—C7119.1 (4)C17—C8—H8107.00
C6—C7—C8113.3 (3)C10—C13—H13120.00
S9—C8—C7110.2 (3)C14—C13—H13119.00
S9—C8—C17111.6 (2)C13—C14—H14120.00
C7—C8—C17114.9 (3)C15—C14—H14120.00
S9—C10—C11122.5 (3)C14—C15—H15119.00
S9—C10—C13118.8 (3)C16—C15—H15119.00
C11—C10—C13118.5 (4)C11—C16—H16120.00
N12—C11—C10122.2 (3)C15—C16—H16120.00
N12—C11—C16118.7 (3)C17—C18—H18119.00
C10—C11—C16119.0 (4)C19—C18—H18119.00
C10—C13—C14121.1 (4)C18—C19—H19120.00
C13—C14—C15119.5 (5)C20—C19—H19120.00
C14—C15—C16121.2 (5)C17—C22—H22119.00
C11—C16—C15120.8 (4)C21—C22—H22119.00
C8—C17—C18124.0 (3)O23—C24—H24A109.00
C8—C17—C22118.2 (3)O23—C24—H24B109.00
C18—C17—C22117.8 (3)O23—C24—H24C109.00
C17—C18—C19121.7 (3)H24A—C24—H24B109.00
C18—C19—C20119.6 (4)H24A—C24—H24C109.00
O25—C20—C19124.8 (4)H24B—C24—H24C109.00
O25—C20—C21116.2 (3)O25—C26—H26A110.00
C19—C20—C21119.0 (4)O25—C26—H26B109.00
O23—C21—C20115.1 (3)O25—C26—H26C109.00
O23—C21—C22125.0 (4)H26A—C26—H26B109.00
C20—C21—C22120.0 (3)H26A—C26—H26C109.00
C17—C22—C21122.0 (4)H26B—C26—H26C109.00
C5—S1—C2—C30.9 (4)S9—C8—C17—C22−64.7 (4)
C2—S1—C5—C40.3 (3)C7—C8—C17—C18−10.4 (6)
C2—S1—C5—C6−178.9 (3)C7—C8—C17—C22169.0 (3)
C10—S9—C8—C730.2 (3)S9—C10—C11—N120.0 (6)
C10—S9—C8—C17−98.7 (3)S9—C10—C11—C16−175.7 (4)
C8—S9—C10—C11−62.9 (4)C13—C10—C11—N12175.1 (4)
C8—S9—C10—C13122.1 (4)C13—C10—C11—C16−0.6 (7)
C24—O23—C21—C20−175.5 (4)S9—C10—C13—C14175.6 (4)
C24—O23—C21—C223.9 (6)C11—C10—C13—C140.3 (7)
C26—O25—C20—C1913.0 (6)N12—C11—C16—C15−175.9 (5)
C26—O25—C20—C21−167.2 (4)C10—C11—C16—C15−0.1 (8)
C11—N12—C6—C5−176.7 (3)C10—C13—C14—C150.6 (8)
C11—N12—C6—C76.6 (6)C13—C14—C15—C16−1.3 (9)
C6—N12—C11—C1050.3 (6)C14—C15—C16—C111.1 (9)
C6—N12—C11—C16−134.0 (5)C8—C17—C18—C19179.1 (4)
S1—C2—C3—C4−1.8 (5)C22—C17—C18—C19−0.3 (6)
C2—C3—C4—C52.1 (5)C8—C17—C22—C21−179.7 (4)
C3—C4—C5—S1−1.4 (4)C18—C17—C22—C21−0.3 (6)
C3—C4—C5—C6177.7 (4)C17—C18—C19—C200.4 (6)
S1—C5—C6—N128.7 (5)C18—C19—C20—O25179.8 (4)
S1—C5—C6—C7−174.4 (3)C18—C19—C20—C210.0 (6)
C4—C5—C6—N12−170.3 (4)O25—C20—C21—O23−0.9 (5)
C4—C5—C6—C76.5 (6)O25—C20—C21—C22179.7 (4)
N12—C6—C7—C8−87.7 (5)C19—C20—C21—O23178.9 (4)
C5—C6—C7—C895.7 (4)C19—C20—C21—C22−0.5 (6)
C6—C7—C8—S948.4 (4)O23—C21—C22—C17−178.7 (4)
C6—C7—C8—C17175.5 (3)C20—C21—C22—C170.6 (6)
S9—C8—C17—C18115.9 (4)
D—H···AD—HH···AD···AD—H···A
C4—H4···O23i0.932.543.457 (5)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C4—H4⋯O23i 0.932.543.457 (5)169

Symmetry code: (i) .

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2.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  2-(4-Fluoro-phen-yl)-4-(thio-phen-2-yl)-2,3-di-hydro-1,5-benzothia-zepine.

Authors:  M Manjula; B C Manjunath; N Renuka; K Ajay Kumar; N K Lokanath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-05
  3 in total
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1.  Crystal structure of 3-(thio-phen-2-yl)-5-p-tolyl-4,5-di-hydro-1H-pyrazole-1-carbo-thio-amide.

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