| Literature DB >> 24764753 |
Eduardo E Castilla1, Lavinia Schuler-Faccini2.
Abstract
Here we propose a registration process for population genetic isolates, usually geographic clusters of genetic disorders, based on the systematic search of rumors, defined as any type of account regardless of its reliability. Systematically ascertained rumors are recorded, and validated through a progressive process of pre-established steps. This paper outlines the conceptual basis for this approach and presents the preliminary results from a rumor-based nationwide registry of genetically isolated populations, named CENISO (Censo Nacional de Isolados), operating in Brazil since 2009. During the first four years of its existence (2009-2013), a total of 191 Rumors were registered and validated, resulting in a prevalence rate of one per million inhabitants of Brazil. When the five statutory geographic regions of Brazil were considered, more Rumors were registered for the Northeast (2.11; 1.74-2.54 per 10(6)) than for the remaining four regions, North, Center-West, Southeast, and South, which did not differ among themselves. About half (86/191) of the recorded rumors were proven to be geographic clusters; of these disorders, 58 were autosomal recessive, 17 autosomal dominant, 5 X-linked, 3 multifactorial, and one environmental (thalidomide embryopathy).Entities:
Keywords: Brazil; disease clustering; genetic diseases; population registers; rumors
Year: 2014 PMID: 24764753 PMCID: PMC3983592 DOI: 10.1590/s1415-47572014000200005
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Figure 1Map of Brazil subdivided in 5 regions showing 191 reported rumors (Dots), 86 of which have already been proven as clusters (Squares). The five Official Regions of Brazil are: North, Northeast, Center-West, Southeast, and South.
Regional distribution of 191 reported rumors and 86 clusters.
| Region | Inhabitants | Rumours | Clusters | ||||
|---|---|---|---|---|---|---|---|
|
|
| ||||||
| N° | N° | Rate/1,000,000 | 95% CI | N° | Rate/1,000,000 | 95% CI | |
| N: north | 16,318,163 | 7 | 0.429 | 0.172–0.884 | 2 | 0.123 | 0.015–0.443 |
| NE: northeast | 53,081,510 | 112 | 2.110 | 1.740–2.540 | 54 | 1.017 | 0.764–1.330 |
| CW: center-west | 14,423,952 | 3 | 0.208 | 0.043–0.608 | 3 | 0.208 | 0.043–0.608 |
| SE: southeast | 81,565,983 | 44 | 0.539 | 0.392–0.724 | 18 | 0.221 | 0.131–0.349 |
| S: south | 27,665,289 | 23 | 0.831 | 0.527–1.250 | 8 | 0.289 | 0.125–0.570 |
| Geographically disperse | 2 | 1 | |||||
| Total | 193,054,897 | 191 | 0.989 | 0.854–1.140 | 86 | 0.445 | 0.356–0.550 |
Etiologic grouping of 191 reported rumors and 86 clusters.
| Etiology | Rumors | Clusters | ||||
|---|---|---|---|---|---|---|
|
|
| |||||
| N° | Rate/1,000,000 | 95% CI | N° | Rate/1,000,000 | 95% CI | |
| AR | 103 | 0.534 | 0.435–0.647 | 58 | 0.300 | 0.228–0.388 |
| AD | 40 | 0.207 | 0.148–0.282 | 17 | 0.088 | 0.051–0.141 |
| XL | 9 | 0.047 | 0.021–0.088 | 5 | 0.026 | 0.001–0.060 |
| MF | 16 | 0.083 | 0.047–0.135 | 3 | 0.016 | 0.003–0.045 |
| ENV | 9 | 0.047 | 0.021–0.088 | 1 | 0.005 | 0.001–0.028 |
| NS | 14 | 0.073 | 0.039–0.122 | 2 | 0.010 | 0.001–0.037 |
| Total | 191 | 0.989 | 0.854–1.140 | 86 | 0.445 | 0.356–0.550 |
Prevalence rates over 193,054,897inhabitants.
Autosomal recessive: AR disorders, autosomal dominant: AD, x-linked: XL, multifactorial: MF, environmental: ENV, not-specified: NS.
Regional distribution of 103 reported rumors and 58 clusters of autosomal recessive disorders.
| Region | Inhabitants | Rumors | Clusters | ||||
|---|---|---|---|---|---|---|---|
|
|
| ||||||
| N° | N° | Rate/1,000,000 | 95% CI | N° | Rate/1,000,000 | 95% CI | |
| N: north | 16,318,163 | 1 | 0.061 | 0.002–0.341 | 1 | 0.061 | 0.002–0.341 |
| NE: northeast | 53,081,510 | 68 | 1.280 | 0.995–1.620 | 37 | 0.069 | 0.049–0.096 |
| CW: center-west | 14,423,952 | 3 | 0.208 | 0.043–0.608 | 3 | 0.208 | 0.043–0.608 |
| SE: southeast | 81,565,983 | 25 | 0.307 | 0.198–0.452 | 14 | 0.172 | 0.094–0.288 |
| S: south | 27,665,289 | 6 | 0.217 | 0.080–0.472 | 2 | 0.072 | 0.009–0.261 |
| Total | 193,054,897 | 103 | 0.534 | 0.435–0.647 | 58 | 0.300 | 0.228–0.388 |
Description of 86 identified clusters, ordered by phenotypic condition and space.
| ID | Phenotypic condition | Space | ||||
|---|---|---|---|---|---|---|
|
|
| |||||
| Name | MIM | ICD10 /BPA | Locality name | IBGE code | Coordinates Lat S - Lon W | |
| 042 | “Yellow people” undefined syndrome | R17 | Craibas | 2702355 | 9°37’–36°46’ | |
| 062 | Oral Clefts | Q37 | Alfenas | 3101607 | 21°25’–45°56’ | |
| 036 | Achondroplasia | 100800 | Q77.4 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 026 | Apert Syndrome | 101200 | Q87.01 | Paulinia | 3536505 | 22°45’–47°09’ |
| 004 | Aniridia | 106210 | Q13.1 | Agua Branca | 2700102 | 09°15’–37°56’ |
| 017 | Spinocerebellar Ataxia, Type 3 | 109150 | G11.8 | Geographically dispersed, Rio Grande do Sul state | 43 | 30° 02’–51° 13’ |
| 072 | Spinocerebellar Ataxia, Type 3 | 109150 | G11.8 | Jerico | 2507408 | 6°32’–37°48’ |
| 010 | Fish-Eye Disease | 136120 | Q13.9 | Betania do Piaui | 2201739 | 08°08’–40°47’ |
| 023 | Thalidomide embryopathy | 142900 | Q86.82 | Cajarí | 2102507 | 03°19’–45°00’ |
| 077 | Huntington Disease | 143100 | G10 | Feira Grande | 2702603 | 9°54’–36°40’ |
| 015 | Li-Fraumeni | 151623 | Q87.8 | Geographically dispersed, Parana State | 41 | 25°26’–49°16’ |
| 057 | Myotonic Dystrophy, DM1 | 160900 | G71.11 | Santa Cruz | 2513208 | 6°31’–38°03’ |
| 078 | Spinocerebellar Ataxia, Type 1 | 164400 | G11.8 | Sao Paulo | 3550308 | 23°29’–46°38’ |
| 079 | Spinocerebellar Ataxia, Type 3 | 164500 | G11.8 | Rio de Janeiro | 3304557 | 22°49’–43°12’ |
| 006 | Rheumatoid Arthritis | 180300 | I00. | Mangueirinha | 4114401 | 25°26’–52°10’ |
| 005 | Acheiropody | 200500 | Q73.8 | Minas Gerais, State | 31 | 19° 55’–43° 57’ |
| 001 | Chondrodysplasia, Grebe type | 200700 | Q77.00 | Bahia, State | 29 | 12° 56’–38° 31’ |
| 076 | Congenital Adrenal Hyperplasia | 201910 | E25.0 | Gado Bravo | 2506251 | 7°34’–35°47’ |
| 008 | Adrenocortical Carcinoma, Hereditary, ADCC | 202300 | C74.0 | Curitiba | 4106902 | 25°26’–49°16’ |
| 037 | Albinism, oculocutaneous | 203100 | E70.3 | Santana do Mundau | 2708105 | 9°10’–36°13’ |
| 038 | Albinism, oculocutaneous | 203100 | E70.3 | Salvador (Ilha Mare) | 2927408 | 12°58’–38°02’ |
| 039 | Albinism, oculocutaneous | 203100 | E70.3 | Miguel Calmon | 2921203 | 11°25’–40°35’ |
| 040 | Albinism, oculocutaneous | 203100 | E70.3 | Marau | 2920700 | 14°06’–38°59’ |
| 003 | Albinism | 203200 | E70.3 | Curupuru | 2103703 | 01°49’–44°51’ |
| 044 | Ataxia Telangectasia | 208900 | G11.30 | Sao Francisco | 2513984 | 6°36’–38°05’ |
| 071 | Seckel Syndrome | 210600 | Q87.18 | Sto Antonio Posse | 3548005 | 22°36’–46°55’ |
| 086 | Cerebrotendinous xanthomatosis | 213700 | E75.50 | Queimadas | 2512507 | 7°21’–35°54’ |
| 007 | Chondrodysplasia, Bloomstrand type | 215045 | Q78. | Mata Grande | 2705002 | 09°07’–37°44’ |
| 068 | Fraser Syndrome | 219000 | Q11.2 | Itu | 3523909 | 23°15’–47°17’ |
| 069 | Fraser Syndrome | 219000 | Q11.2 | Tres Lagoas | 5008305 | 20°45’–51°41’ |
| 052 | Dandy-Walker | 220200 | Q03.1 | Indaiatuba | 3520509 | 23°05’–47°13’ |
| 045 | Friedreich Ataxia | 229300 | G11.11 | Piloes | 2410009 | 6°16’–38°02’ |
| 073 | Gangliosidosis, Type I | 230500 | E75.10 | Porto Alegre | 4314902 | 30°1’–51°13’ |
| 075 | Gangliosidosis, Type I | 230500 | E75.10 | Jundiai | 3525904 | 23°11’–46°53’ |
| 074 | Gaucher Disease, Type I | 230800 | E75.21 | Tabuleiro do Norte | 2313104 | 5°15’–38°07’ |
| 012 | Glycogen Storage Disease, Ia | 232200 | E74.01 | Caxias do Sul | 4305108 | 29°06’–51°11’ |
| 061 | Maple Syrup Urine Disease, MSUD | 248600 | E71.0 | Vinhedo | 3556701 | 23°01’–46°58’ |
| 063 | Meckel Syndrome | 249000 | Q61.9 | Itape | 2916203 | 14°53’–39°25’ |
| 064 | Meckel Syndrome | 249000 | Q61.9 | Piracicaba | 3538709 | 22°43’–47°38’ |
| 048 | Cartilage hair hypoplasia | 250250 | Q78.8 | Jequitinhonha | 3135803 | 16°26’–41°00’ |
| 049 | Cartilage hair hypoplasia | 250250 | Q78.8 | Campinas | 3509502 | 22°54’–47°03’ |
| 065 | Mucolipidosis, Type II | 252500 | E77.00 | Girau do Ponciano | 2702900 | 9°53’–36°49’ |
| 032 | Mucopolysaccharidosis, Type IIIC: Acetyl CoA | 252930 | E76.23 | Serra Branca | 2504702 | 7°28’–36°39’ |
| 018 | Mucopolysaccharidosis, Type IV A: Morquio | 253000 | E76.25 | Serra Branca | 2515500 | 07°28’–36°39’ |
| 033 | Mucopolysaccharidosis, Type IV A: Morquio | 253000 | E76.25 | Mombaça | 2308500 | 5°44’–39°37’ |
| 034 | Mucopolysaccharidosis, Type IV A: Morquio | 253000 | E76.25 | Campina Grande | 2504009 | 7°12’–35°52’ |
| 019 | Mucopolysaccharidosis, Type VI: Maroteaux | 253200 | E76.28 | Monte Santo | 2921500 | 10°26’–39°19’ |
| 035 | Mucopolysaccharidosis, Type VI: Maroteaux | 252650 | E76.28 | Quixere | 2311504 | 5°4’–37°59’ |
| 043 | Spinal Muscular Atrophy, Type I | 253300 | G12.1 | Vieiropolis | 2517209 | 6°30’–38°15’ |
| 046 | Spinal Muscular Atrophy, Type I | 253300 | G12.1 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 055 | Muscular Dystrophy, Limb-Girdle | 253601 | G71.08 | Ouro Branco | 2408508 | 6°42’–36°56’ |
| 056 | Muscular Dystrophy, Limb-Girdle | 253601 | G71.08 | Jerico | 2507408 | 6°32’–37°48’ |
| 020 | Neu-Laxova | 256520 | Q04.9 | PousoAlegre | 3152501 | 22°13’–45°56’ |
| 067 | Opsismodysplasia | 258480 | Q78.8 | Belo Jardim | 2601706 | 8°20’–36°25’ |
| 021 | Osteogenesis imperfect, Type 3 | 259420 | Q78.00 | BuenoBrandao | 3109105 | 22°26’–46°21’ |
| 009 | Isolated Growth Hormone Deficiency | 262400 | E23.01 | Itabaianinha | 2803005 | 11°16’–37°47’ |
| 085 | Short Limb Polydactyly III: Verma-Namouff | 263510 | Q77.2 | Gameleira | 2605905 | 8°35’–35°23’ |
| 070 | Postaxial Acrofacial Dysostosis | 263750 | Q75.1 | Sumare | 3552403 | 22°49’–47°15’ |
| 016 | Lipodystrophy, Congenital Generalized | 269700 | E88.1 | Sao Miguel | 2412500 | 06°12’–39°29’ |
| 011 | Twinning | 276400 | P01.5 | CândidoGodói | 4304309 | 27°57’–54°45’ |
| 081 | Usher Syndrome | 276900 | H35.50 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 025 | Xeroderma Pigmentosum | 278730 | Q82.1 | Faina | 5207535 | 15°26’–50°21’ |
| 080 | Lesh-Nyhan Syndrome | 300322 | E79.1 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 059 | Muscular Dystrophy, Becker Type | 300376 | G71.00 | Ouro Velho | 2510600 | 7°17’–37°09’ |
| 041 | Alpha-thalassemia, mental retardation | 301040 | D56.0 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 031 | Mucopolysaccharidosis, Type II: Hunter | 309900 | E76.1 | Aquiraz | 2301000 | 3°54’–38°23’ |
| 060 | Muscular Dystrophy, Duchenne Type | 310200 | G71.06 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 027 | Laron Syndrome | 600946 | E34.32 | Orobo | 2609709 | 7°44’–35°36’ |
| 024 | Tricoepithelioma, multiple familiar | 601606 | Q84.9 | Aracati | 2301109 | 04°33’–37°46’ |
| 013 | Cerebello-trigeminal-dermal dysplasia | 601853 | Q87.8 | Ribeirao Preto | 3543402 | 21°10’–47°48’ |
| 047 | Breast cancer, familial | 604370 | C50.9 | Geographically dispersed-South Region | ||
| 082 | Deafness (Connexin 26) | 605428 | H91.9 | Queimadas | 2512507 | 7°21’–35°54’ |
| 084 | Deafness | 605428 | H91.9 | Maracana | 1504307 | 0°35’–47°31’ |
| 083 | Deafness (DFNA18) | 606012 | H91.9 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 050 | Charcot-Marie-Tooth | 606482 | G60.00 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 051 | Charcot-Marie-Tooth | 606482 | G60.00 | Sossego | 2516151 | 6°45’–36°14’ |
| 029 | Mucopolysaccharidosis, Type I: Hurler | 607014 | E76.0 | Piloes | 2410009 | 6°16’–38°02’ |
| 030 | Mucopolysaccharidosis, Type I: Hurler | 607014 | E76.0 | Jangada | 5104906 | 15°14’–56°29’ |
| 066 | Niemann-Pick Disease, Type B | 607616 | E75.25 | Santa Cruz | 2513208 | 6°31’–38°03’ |
| 058 | Muscular Dystrophy, Congenital | 607855 | G71.25 | Piloes | 2410009 | 6°16’–38°02’ |
| 053 | Diaphanospondylodysostosis | 608022 | Q78.8 | Itupiranga | 1503705 | 5°8’–49°19’ |
| 054 | Diaphanospondylodysostosis | 608022 | Q78.8 | Campinas | 3509502 | 22°54’–47°03’ |
| 022 | SPOAN syndrome | 609541 | Q87.8 | Serrinha dos Pintos | 2413557 | 06°06’–37°57’ |
| 014 | Ichthyosis, Congenital | 612281 | Q80.9 | Humaita | 4309704 | 27°33’–53°58’ |
| 028 | Spastic Paraplegy | 612319 | G11.4 | Sao Miguel | 2412500 | 6°12’–39°29’ |
| 002 | Santos Syndrome | 613005 | Q87.8 | Riacho de Santana | 2410801 | 06°15’–38°19’ |
ID: Cluster Identification code. MIM: Mendelian Inheritance in Man code. ICD10/BPA: ICD10 with British Paediatric Association fifth digit. IBGE code: Brazilian Institute of Geography and Statistics municipality code, in which the first two digits identify the State (http://www.ibge.gov.br/home/geociencias/areaterritorial/area.shtm).