Literature DB >> 24762292

Looking beneath the surface to determine what makes DNA damage deleterious.

Marc M Greenberg1.   

Abstract

Apurinic/apyrimidinic and oxidized abasic sites are chemically reactive DNA lesions that are produced by a variety of damaging agents. The effects of these molecules that lack a Watson-Crick base on polymerase enzymes are well documented. More recently, multiple consequences of the electrophilic nature of abasic lesions have been revealed. Members of this family of DNA lesions have been shown to inactivate repair enzymes and undergo spontaneous transformation into more deleterious forms of damage. Abasic site reactivity provides insight into the chemical basis for the cytotoxicity of DNA damaging agents that produce them and are valuable examples of how looking beneath the surface of seemingly simple molecules can reveal biologically relevant chemical complexity.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24762292      PMCID: PMC4149920          DOI: 10.1016/j.cbpa.2014.03.018

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  53 in total

1.  Assays for determining lesion bypass efficiency and mutagenicity of site-specific DNA lesions in vivo.

Authors:  James C Delaney; John M Essigmann
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

2.  Interstrand cross-links generated by abasic sites in duplex DNA.

Authors:  Sanjay Dutta; Goutam Chowdhury; Kent S Gates
Journal:  J Am Chem Soc       Date:  2007-01-25       Impact factor: 15.419

3.  Photochemical generation of oligodeoxynucleotide containing a C4'-oxidized abasic site and its efficient amine modification: dependence on structure and microenvironment.

Authors:  Kazuteru Usui; Mariko Aso; Mitsuhiro Fukuda; Hiroshi Suemune
Journal:  J Org Chem       Date:  2007-12-07       Impact factor: 4.354

4.  What a difference a decade makes: insights into translesion DNA synthesis.

Authors:  Wei Yang; Roger Woodgate
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-26       Impact factor: 11.205

5.  N-formylation of lysine in histone proteins as a secondary modification arising from oxidative DNA damage.

Authors:  Tao Jiang; Xinfeng Zhou; Koli Taghizadeh; Min Dong; Peter C Dedon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

6.  DNA polymerase lambda mediates a back-up base excision repair activity in extracts of mouse embryonic fibroblasts.

Authors:  Elena K Braithwaite; Rajendra Prasad; David D Shock; Esther W Hou; William A Beard; Samuel H Wilson
Journal:  J Biol Chem       Date:  2005-03-03       Impact factor: 5.157

7.  Oxidation of the sugar moiety of DNA by ionizing radiation or bleomycin could induce the formation of a cluster DNA lesion.

Authors:  Peggy Regulus; Benoit Duroux; Pierre-Alain Bayle; Alain Favier; Jean Cadet; Jean-Luc Ravanat
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-22       Impact factor: 11.205

8.  DNA strand breaking by the hydroxyl radical is governed by the accessible surface areas of the hydrogen atoms of the DNA backbone.

Authors:  B Balasubramanian; W K Pogozelski; T D Tullius
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

9.  Nucleosome core particle-catalyzed strand scission at abasic sites.

Authors:  Jonathan T Sczepanski; Chuanzheng Zhou; Marc M Greenberg
Journal:  Biochemistry       Date:  2013-03-12       Impact factor: 3.162

10.  Interstrand DNA cross-links induced by alpha,beta-unsaturated aldehydes derived from lipid peroxidation and environmental sources.

Authors:  Michael P Stone; Young-Jin Cho; Hai Huang; Hye-Young Kim; Ivan D Kozekov; Albena Kozekova; Hao Wang; Irina G Minko; R Stephen Lloyd; Thomas M Harris; Carmelo J Rizzo
Journal:  Acc Chem Res       Date:  2008-05-24       Impact factor: 22.384

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  8 in total

1.  Rapid Histone-Catalyzed DNA Lesion Excision and Accompanying Protein Modification in Nucleosomes and Nucleosome Core Particles.

Authors:  Liwei Weng; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2015-08-20       Impact factor: 15.419

2.  Reactivity of Nucleic Acid Radicals.

Authors:  Marc M Greenberg
Journal:  Adv Phys Org Chem       Date:  2016       Impact factor: 2.833

Review 3.  Functions of the major abasic endonuclease (APE1) in cell viability and genotoxin resistance.

Authors:  Daniel R McNeill; Amy M Whitaker; Wesley J Stark; Jennifer L Illuzzi; Peter J McKinnon; Bret D Freudenthal; David M Wilson
Journal:  Mutagenesis       Date:  2020-02-13       Impact factor: 3.000

Review 4.  Interactions of Mitochondrial Transcription Factor A with DNA Damage: Mechanistic Insights and Functional Implications.

Authors:  Krystie Chew; Linlin Zhao
Journal:  Genes (Basel)       Date:  2021-08-15       Impact factor: 4.096

5.  A ROS-Activatable Agent Elicits Homologous Recombination DNA Repair and Synergizes with Pathway Compounds.

Authors:  Fathima Shazna Thowfeik; Safnas F AbdulSalam; Mark Wunderlich; Michael Wyder; Kenneth D Greis; Ana L Kadekaro; James C Mulloy; Edward J Merino
Journal:  Chembiochem       Date:  2015-11-02       Impact factor: 3.164

6.  Nucleotide excision repair of chemically stabilized analogues of DNA interstrand cross-links produced from oxidized abasic sites.

Authors:  Souradyuti Ghosh; Marc M Greenberg
Journal:  Biochemistry       Date:  2014-09-10       Impact factor: 3.162

7.  An oxidized abasic lesion inhibits base excision repair leading to DNA strand breaks in a trinucleotide repeat tract.

Authors:  Jill M Beaver; Yanhao Lai; Shantell J Rolle; Liwei Weng; Marc M Greenberg; Yuan Liu
Journal:  PLoS One       Date:  2018-02-01       Impact factor: 3.240

8.  DNA damage by Withanone as a potential cause of liver toxicity observed for herbal products of Withania somnifera (Ashwagandha).

Authors:  Shazia Siddiqui; Nabeel Ahmed; Mausumi Goswami; Anindita Chakrabarty; Goutam Chowdhury
Journal:  Curr Res Toxicol       Date:  2021-02-16
  8 in total

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