The L-type amino acid transporter (LAT) family consists of four members (LAT1-4) that mediate uptake of neutral amino acids including leucine. Leucine is not only important as a building block for proteins, but plays a critical role in mTORC1 signaling leading to protein translation. As such, LAT family members are commonly upregulated in cancer in order to fuel increased protein translation and cell growth. To identify potential LAT-specific inhibitors, we established a function-based high-throughput screen using a prefractionated natural product library. We identified and purified two novel monoterpene glycosides, ESK242 and ESK246, sourced from a Queensland collection of the plant Pittosporum venulosum. Using Xenopus laevis oocytes expressing individual LAT family members, we demonstrated that ESK246 preferentially inhibits leucine transport via LAT3, while ESK242 inhibits both LAT1 and LAT3. We further show in LNCaP prostate cancer cells that ESK246 is a potent (IC50 = 8.12 μM) inhibitor of leucine uptake, leading to reduced mTORC1 signaling, cell cycle protein expression and cell proliferation. Our study suggests that ESK246 is a LAT3 inhibitor that can be used to study LAT3 function and upon which new antiprostate cancer therapies may be based.
The L-type amino acid transporter (LAT) family consists of four members (LAT1-4) that mediate uptake of neutral amino acids including leucine. Leucine is not only important as a building block for proteins, but plays a critical role in mTORC1 signaling leading to protein translation. As such, LAT family members are commonly upregulated in cancer in order to fuel increased protein translation and cell growth. To identify potential LAT-specific inhibitors, we established a function-based high-throughput screen using a prefractionated natural product library. We identified and purified two novel monoterpene glycosides, ESK242 and ESK246, sourced from a Queensland collection of the plant Pittosporum venulosum. Using Xenopus laevis oocytes expressing individual LAT family members, we demonstrated that ESK246 preferentially inhibits leucine transport via LAT3, while ESK242 inhibits both LAT1 and LAT3. We further show in LNCaPprostate cancer cells that ESK246 is a potent (IC50 = 8.12 μM) inhibitor of leucine uptake, leading to reduced mTORC1 signaling, cell cycle protein expression and cell proliferation. Our study suggests that ESK246 is a LAT3 inhibitor that can be used to study LAT3 function and upon which new antiprostate cancer therapies may be based.
l-type amino acid transporters (LATs) mediate the Na+-independent uptake of neutral amino acids, including the
essential branched chain amino acids (BCAAs) leucine, isoleucine and
valine. LATs are composed of two distinct families, SLC7 (LAT1/SLC7A5
and LAT2/SLC7A8) and SLC43 (LAT3/SLC43A1 and LAT4/SLC43A2). LAT1 and
LAT2 have a broad substrate range and associate with the 4F2hc glycoprotein
(SLC3A2) to form a heterodimeric obligatory exchanger of high affinity.[1−5] LAT3 and LAT4 have a narrower substrate range and utilize facilitated
diffusion to transport neutral amino acids.[6−8]Expression
of LATs on mammalian cells is critical to mediate uptake
of amino acids that can subsequently be used for energy production
and as building blocks for protein production. Amino acids, especially
leucine, are also a crucial component of the mTORC1 signaling pathway,
which controls protein translation.[9] Translation
can only begin when sufficient amino acids, in particular leucine,
are present within the cell. Recent data suggests that intracellular
leucine levels are detected by a leucyl-tRNA synthetase (LRS),[10,11] which is thought to activate the Rag GTPase complex, binding to
Raptor and activating mTORC1 signaling on the surface of lysosomes.[10−14] Therefore, changes in LAT expression and function can control intracellular
amino acid levels and mTORC1 regulated protein translation.LATs have been shown to be critical mediators of protein translation
and cell growth in a variety of cancers.[15−21] In prostate cancer, we have shown increased LAT3 expression in primary
cancer and increased LAT1 expression in metastasis.[16] Knockdown of either LAT3 or LAT1 expression in prostate
cancer cell lines inhibits mTORC1 pathway activation, cell growth,
and cell cycle both in vitro and in vivo.[16,17]The leucine analogue 2-aminobicyclo[2.2.1]heptane-2-carboxylic
acid (BCH) is commonly used to inhibit l-type amino acid
transport in vitro. However, BCH targets all members
of the LAT family and is used in millimolar quantities, making it
unsuitable as a LAT inhibitor in vivo.[22] A novel LAT1 inhibitor, JPH203/KYT-0353, has
also been reported. This tyrosine analogue has only been tested on
LAT1 and LAT2, showing selectivity for LAT1-mediated transport, as
well as suppression of HT-29colorectal adenocarcinoma cell growth in vitro and in vivo.[23]In this study, we screened a prefractionated natural
product library
and identified two novel LAT inhibitors, ESK242 and ESK246. We further
demonstrate that ESK246 preferentially inhibits LAT3, reducing LAT3-mediated
leucine uptake in Xenopus laevis oocytes. We show
that ESK246 is a more potent LAT inhibitor than ESK242, reducing leucine
uptake, mTORC1 signaling, cell cycle protein expression, and proliferation
in prostate cancer cell lines.
Results and Discussion
High-throughput
Screening of the Prefractionated Nature Bank Library. To discover LAT3-specific inhibitors, we used a function-based strategy
for high-throughput screening (HTS) of the Nature Bank prefractionated
library (Figure 1). Our high-throughput screen
incorporated a 15 min [3H]-l-leucine uptake assay
using the androgen-responsive prostate cancer cell line, LNCaP (Figure 1A). The HTS screen was performed on a subset of
the Nature Bank lead-like enhanced (LLE) fraction library. This library
consists of over 200 000 semipurified fractions sourced from
plants and marine invertebrates collected from Australia, China and
Papua New Guinea.[24,25]
Figure 1
High-throughput screening for LAT3 inhibitors.
(A) Schematic representation
of the function-based drug discovery process. Eleven HPLC fractions
of each biota sample were aliquoted into 96-well plates, with 88 fractions
on each plate. Triplicate wells of negative control (DMSO; green)
and positive control (BCH; red) were also loaded. LNCaP cells (which
express high levels of LAT3) and [3H]-l-leucine
were added to each well for 15 min to identify any fractions that
inhibit LAT3-mediated leucine uptake. Verified fractions were examined
by 1H NMR to identify the structure of compounds. Novel
compounds were characterized using amino acid uptake assays in Xenopus laevis oocytes and LNCaP prostate cancer cell based
assays. (B) A leucine uptake assay was used to screen 4488 fractions
from the Nature Bank library in LNCaP cells (n =
1 assay per fraction). Threshold for inhibition was set at 70% of
control (dotted line) and BCH positive controls are indicated (red).
High-throughput screening for LAT3 inhibitors.
(A) Schematic representation
of the function-based drug discovery process. Eleven HPLC fractions
of each biota sample were aliquoted into 96-well plates, with 88 fractions
on each plate. Triplicate wells of negative control (DMSO; green)
and positive control (BCH; red) were also loaded. LNCaP cells (which
express high levels of LAT3) and [3H]-l-leucine
were added to each well for 15 min to identify any fractions that
inhibit LAT3-mediated leucine uptake. Verified fractions were examined
by 1H NMR to identify the structure of compounds. Novel
compounds were characterized using amino acid uptake assays in Xenopus laevis oocytes and LNCaPprostate cancer cell based
assays. (B) A leucine uptake assay was used to screen 4488 fractions
from the Nature Bank library in LNCaP cells (n =
1 assay per fraction). Threshold for inhibition was set at 70% of
control (dotted line) and BCH positive controls are indicated (red).The HTS involved screening the
Nature Bank library, initially analyzing
4488 fractions (51 plates × 88 fractions) for activity against
LAT3-mediated [3H]-l-leucine uptake (Figure 1B). Each plate also contained 3 negative control
wells (DMSO, 0.5% (v/v)) and 3 wells of the LAT family inhibitor BCH
(10 mM) as a positive control. BCH consistently inhibited leucine
uptake to 30–40% of control, while the negative control ranged
from 90–110% on each plate (Figure 1B). In order to reduce the number of hits, we restricted our analysis
from the initial screen to fractions that reduced leucine uptake to
less than 70% of control, which resulted in a total of 31 fractions
(0.7% of analyzed fractions). These fractions were retested in LNCaP
cells using the [3H]-l-leucine uptake assay as
well as a cell viability assay to determine whether they could inhibit
prostate cancer cell viability. Fraction 11711.8-21-11 showed substantial
inhibition of both leucine uptake and cell growth (Supporting Information (SI) Figure S1A). As some fractions
may contain toxic compounds that rapidly damage cell membranes, such
as detergents, leading to the low [3H]-l-leucine
levels and cell growth, we also examined cell morphology after 48
h treatment, confirming that fraction 11711.8-21-11 did not damage
the cell membranes (SI Figure S1B). Fraction
11711.8-21-11 originated from a collection of the plant Pittosporum venulosum (Queensland, Australia) and yielded
two new LAT inhibitors, ESK242 and ESK246 (Figure 2A). The structures of these new natural products were identified
by extensive spectroscopic and spectrometric analyses, confirmed by
chemical synthesis, and characterized by a variety of biological methods.
Figure 2
Identification of compound structure. (A) Structures
of two new
natural products ESK242 and ESK246. (B) Crucial NMR correlations used
to establish the planar structure of ESK246. Bold lines indicate 1H–1H COSY correlations that were used to
identify the 1,1-dimethyl vinyl spin system (fragment B), fucopyranoside
spin system (fragment C) and the terpineol spin system (fragment D).
Red arrows depict the crucial 1H–13C
HMBC correlations used to identify the position of the aglycone substituent
and the esterification sites of the fucopyranoside residue. (C) Synthetic
route to ESK246. Reagents used: (a) α-terpineol, Ag2CO3, CH2Cl2, rt, 48 h. (b) i. NaOMe,
MeOH, rt, 3 h. ii. 3,3-Dimethylacryloyl chloride, py, CH2Cl2, 0 °C, 18 h. iii. Ac2O, py,
CH2Cl2, 0 °C, 3 h. In addition to the synthesis
of diastereomers of α-terpineol shown, an identical synthetic
route was used with the (4S)-α-terpineol starting
material.
Isolation
and Identification of ESK242 and ESK246
ESK246
(trivial name venuloside A) was isolated as an optically active clear
oil ([α]D +39, c 0.1, MeOH) with
a molecular formula C23H36O7, as
established from HRESIMS measurements. The 1H NMR spectrum
of ESK 246 in C6D6 was well resolved and showed 21 resonances composed of 2 sp2-hybridized methines, 6 sp3-hybridized methines,
3 diastereotopic methylene pairs, and 7 sp3-hybridized
methyls (SI Table S1). The 13C NMR spectrum showed two carbonyls (δC 168.9, 165.8),
three other quaternary carbons (δC 157.7, 133.6 and
79.4), two olefinic resonances (δC 121.4 and 116.4),
four oxymethines (δC 95.9, 73.8, 70.4, 70.3, and
70.0), one other methine (δC 44.4), three methylenes
(δC 31.3, 26.96, and 24.0), and seven methyls (δC 27.02, 23.9, 23.53, 23.52, 20.7, 20.2, and 16.6). Interpretation
of 2D NMR data allowed for the identification of four partial structures
depicted in Figure 2B, namely an acetyl substituent
(fragment A), a 3-methylbut-2-enoyl group (fragment B), a sugar
moiety (fragment C), and a ten-carbon aglycone unit (fragment D).
Characteristic chemical shifts for the methyl (δH 1.87, 3H, s, δC 20.7) and carbonyl resonances (δC 168.9, C-1″) were used to assign fragment A as the
acetyl substituent. Fragment B had two methyl vinyl resonances (δH 2.14, d, J = 1.0 Hz, δC 27.02 and 1.45, d, J = 1.0 Hz; δC 20.2), coupled to each other and to an olefin proton (δH 5.77, δC 116.4), in addition to a quaternary
carbon (δC 157.7) and an ester carbonyl resonance
(δC 165.8) consistent with a senecioyl (3-methylbut-2-enoyl)
moiety. Partial structure C contained an anomeric proton, four other
oxymethines and a doublet methyl resonance, consistent with the presence
of a six-deoxy sugar moiety. The 1H NMR chemical shifts
and coupling constants for H-1′ (δH 4.47,
d, J = 7.8 Hz), H-2′ (δH 5.66,
dd, J = 10.3, 7.8 Hz), H-3′ (5.16, dd, J = 10.4, 3.2 Hz), H-4′ (3.72, br d, J = 3.2 Hz), H-5′ (3.10, br q, J = 6.3 Hz),
and H-6′-Me (1.17, d, J = 6.3 Hz) protons,
together with the ROESY data showed that the glycosyl moiety was β-fucopyranoside.
The downfield shift of H-2′ and H-3′ resonances suggested
that the C-2 and C-3 hydroxyl groups on the sugar moiety were esterified.
Chemical shifts assigned to the acetyl and senecioyl substituents
were positioned on C-2′ and C-3′ respectively following
crucial 1H–13C HMBC correlations from
the H-2′ glycosidic resonance to C-1″ carbonyl on the
acetyl group, as well as the glycosidic H-3′ to C-1‴
carbonyl on the senecioyl group (Figure 2B).
The sugar residue in ESK246 was therefore concluded to be 2′-acetyl-3′-senecioyl-β-fucopyranoside.
Signals for the aglycone fragment D, C10H17 as
suggested by the molecular formula, were composed of an olefinic multiplet,
three diastereotopic methylene pairs, a single methine and three methyl
resonances, consistent with the presence of an α-terpineol moiety.
Crucial HMBC correlation from the anomeric H-1′ to the quaternary
C-8carbon (δC 79.4) (Figure 2B) connected substructure D to the sugar unit to complete the planar
structure of the glycoside.Identification of compound structure. (A) Structures
of two new
natural products ESK242 and ESK246. (B) Crucial NMR correlations used
to establish the planar structure of ESK246. Bold lines indicate 1H–1H COSY correlations that were used to
identify the 1,1-dimethyl vinyl spin system (fragment B), fucopyranoside
spin system (fragment C) and the terpineol spin system (fragment D).
Red arrows depict the crucial 1H–13C
HMBC correlations used to identify the position of the aglycone substituent
and the esterification sites of the fucopyranoside residue. (C) Synthetic
route to ESK246. Reagents used: (a) α-terpineol, Ag2CO3, CH2Cl2, rt, 48 h. (b) i. NaOMe,
MeOH, rt, 3 h. ii. 3,3-Dimethylacryloyl chloride, py, CH2Cl2, 0 °C, 18 h. iii. Ac2O, py,
CH2Cl2, 0 °C, 3 h. In addition to the synthesis
of diastereomers of α-terpineol shown, an identical synthetic
route was used with the (4S)-α-terpineol starting
material.The absolute configuration of
the natural product was determined
via comparison of chiro-optical and NMR spectral data with that of
the synthetically prepared analogues. Hydrolysis of ESK246 in 5% HCl
in MeOH afforded a mixture of methyl-3-O-senecioyl-β-fucopyranoside, methyl-3-O-senecioyl-α-fucopyranoside and methyl-4-O-senecioyl-α-fucopyranoside (see Supporting Information). Comparison of the optical rotation values of the ESK246 hydrolysis-sourced
α- and β-anomers of methyl-3-O-senecioyl-fucopyranoside
with that of the synthetic α- and β-anomers of methyl-3-O-senecioyl-d-fucopyranoside established
the absolute configuration of fucose residue as d (see Supporting Information). The d-configuration
of the fucosesugar is typical of plant-sourced glycosides, whereas l has been reported from bacteria- and plant-sourced polysaccharides,
as well as glycolipids and glycoproteins of animal origin.[26] Resolving the absolute configuration of the
α-terpineol proved to be a challenge as the acid hydrolysis
work-up and isolation did not yield any terpineol product. The absolute
configuration of the natural product was therefore resolved with total
synthesis of the racemic and (4S)-α-terpineol
diastereomers of ESK246. Starting from d-fucose and the readily
available (4rac)- and (4S)-α-terpineols,
a four-step synthesis was achieved (Figure 2C and Supporting Information text). Koenigs–Knorr
glycosylation of bromo-fucosyl donor with α-terpineol afforded
the fully protected α-terpineol fucoside, which was subsequently
deprotected under basic conditions (NaOMe/MeOH) to give the α-terpineol
fucoside. Utilizing the inherent difference in reactivity of the fucose
hydroxyl groups,[27] selective acylation
at the 3′O position of α-terpineol fucoside
with 3,3-dimethylacryloyl chloride was achieved.[28] Introduction of the acetate moiety at the 2′O position was carried out under basic conditions using
acetic anhydride to give the final product.In the 1H NMR spectrum of the C-4 epimeric mixure of
ESK246, the greatest signal dispersion between the two isomers was
observed with the H-9 and H-10 resonances (SI
Figure S2). These two sets of resonances were therefore used
as a point of differentiation in the determination of the absolute
configuration of ESK246. In an 1H NMR-based titration experiment
depicted in SI Figure S3, addition of the
naturally occurring ESK246 to the C-4 epimeric mixture of α-terpineol-8-O-β-d-(2′-acetyl, 3′-senecioyl)
fucopyranoside resulted in the enhancement of the resonances associated
with the (4R)-α-terpineol epimer, therefore
securing the stereochemistry of the natural product as (4R)-α-terpineol-8-O-β-d-(2′-acetyl,
3′-senecioyl) fucopyranoside.ESK242 (trivial name venuloside
B) was isolated as an optically
active clear oil ([α]D +20, c 0.1,
MeOH) with a molecular formula C23H36O7, as established from HRESIMS measurements. The compound was isomeric
with ESK246 and showed an identical number of 1H and 13C resonances in the NMR spectra. The most significant differences
between the NMR spectra of the two constitutional isomers were centered
on the two methyl vinyl resonances H-4‴ (δH 2.05, m; δC 16.0) and H-5‴ (δH 1.94, m; δC 20.8) as well as an olefinic
methine resonance at H-3‴ (δH 5.79, m; δC 139.3). In contrast to ESK246, which had a senecioyl group
at C-3, ESK242 showed two methyl vinyl resonances each coupled to
an olefin proton, consistent with a 1,2-dimethyl vinyl group. A ROESY
experiment (τmix = 400 ms) assigned the geometry
of the double bond to be cis, based on the observation
of a correlation between H-3‴ and H-5‴ methyl resonances,
consistent with the presence of an angeloyl group. Crucial 1H–13C HMBC correlations from the glycosidic H-3′
to C-1‴ placed the angeloyl group on C-3′ of the sugar
moiety. Interpretation of 1D and 2D NMR data (SI Table S1) established the structure of ESK242 as α-terpineol-2′-acetate-3′-angeloyl-β-fucopyranoside.
Based on the structural homology with ESK246 and the close correspondence
of the NMR chemical shifts (SI Table S1) the absolute configuration of ESK242 is proposed to be (4R)-α-terpineol-8-O-β-d-(2′-acetyl, 3′-angeloyl) fucopyranoside.
Effects of
ESK242 and ESK246 on Leucine Uptake in Prostate Cancer
Cell Lines
To examine the inhibitory effects of ESK242 and
ESK246, we next investigated the impact of these new compounds on
LNCaP and PC-3prostate cancer cell lines. We have previously shown
that LAT3 is the dominant leucine transporter in LNCaP cells, while
LAT1 plays a more important role in PC-3 cells (SI Figure S4A).[16] In the presence
of compounds ESK242 and ESK246, leucine uptake was decreased in a
dose-dependent manner in LNCaP cells (Figure 3A). The IC50 of ESK242 is 29.6 ± 1.2 μM, while
the IC50 of ESK246 is 8.12 ± 1.2 μM. Both compounds
had an IC50 more than 2 orders of magnitude lower than
the universal LAT inhibitor, BCH, whose IC50 is 4060 ±
1.1 μM (Figure 3A). In contrast, neither
compound substantially inhibited leucine uptake at the same concentration
in PC-3 cells, in which LAT1 is more abundantly expressed (SI Figure S4B).
Figure 3
(A) Inhibition of LAT3-mediated [3H]-l-leucine
uptake in LNCaP cells. The IC50 of BCH, ESK242 and ESK246
was calculated to be 4060 ± 1.1 μM, 29.6 ± 1.2 μM,
and 8.12 ± 1.2 μM, respectively. (B–E) [3H]-l-leucine uptake assay in the presence or absence of
50 μM ESK242 or ESK246 in oocytes expressing LAT1/4F2hc (B),
LAT2/4F2hc (C), LAT3 (D), or LAT4 (E). Data show mean ± SEM (n = 3), *P < 0.05, **P < 0.01, ***P < 0.001.
(A) Inhibition of LAT3-mediated [3H]-l-leucine
uptake in LNCaP cells. The IC50 of BCH, ESK242 and ESK246
was calculated to be 4060 ± 1.1 μM, 29.6 ± 1.2 μM,
and 8.12 ± 1.2 μM, respectively. (B–E) [3H]-l-leucine uptake assay in the presence or absence of
50 μM ESK242 or ESK246 in oocytes expressing LAT1/4F2hc (B),
LAT2/4F2hc (C), LAT3 (D), or LAT4 (E). Data show mean ± SEM (n = 3), *P < 0.05, **P < 0.01, ***P < 0.001.
Characterization of ESK242 and ESK246 by Amino Acid Uptake Assay
in Oocytes
The differential effects on leucine uptake in
LNCaP and PC-3 cells suggested these compounds selectively inhibit
individual LAT family members. To test the specificity of the purified
compounds, we expressed LAT1/4F2hc, LAT2/4F2hc, LAT3 or LAT4 in Xenopus laevis oocytes and [3H]-l-leucine
uptake assays were performed. After 4 days, transporters were expressed
on the plasma membrane of oocytes, as shown by an increase in [3H]-l-leucine uptake compared to uninjected oocytes
(SI Figure S5A). To demonstrate expression
of the LAT3 transporter on the surface of oocytes, we performed a
surface biotinylation assay, which confirmed LAT3 expression in injected
oocytes only (SI Figure S5B). The optimal
concentration of leucine, and duration of leucine uptake, was determined
by dose response and time course experiments, showing 1 mM l-leucine for 30 min to be optimal (SI Figures
S5C and D). After treatment with 50 μM ESK242 or ESK246
for 30 min, LAT1/4F2hc transport activity was significantly inhibited
by ESK242 (34.2%; Figure 3B). LAT3-mediated
leucine transport was significantly inhibited by both ESK242 (47.9%)
and ESK246 (47.3%; Figure 3D). Neither compound
significantly inhibited leucine uptake mediated by LAT2/4F2hc (Figure 3C) or LAT4 (Figure 3E). These
results suggest that ESK246 is a preferential LAT3 inhibitor and ESK242
inhibits both LAT1 and LAT3. We next determined the IC50 of both compounds for LAT3 in oocytes. The IC50 of ESK246
was calculated at 146.7 ± 2.4 μM, which is lower than the
IC50 of ESK242 at 281.8 ± 1.3 μM (Figure 4A), suggesting that ESK246 has a higher affinity
for LAT3 than ESK242.
Figure 4
ESK242 and ESK246 inhibit LAT3 via a mixed mode of inhibition.
(A) Increasing doses of ESK242 and ESK246 inhibit [3H]-l-leucine transport in oocytes expressing LAT3 with IC50 values of 281.8 ± 1.3 μM and 146.7 ± 2.4 μM,
respectively. (B–C) [3H]-l-leucine dose
response in the absence or presence of 50 μM or 500 μM
ESK242 (B) or ESK246 (C). Data are fitted to the Michaelis–Menten
equation and normalized to the maximal rate of transport of [3H]-l-leucine alone. An Eadie–Hofstee transformation
was performed (inset, B–C). Data show mean ± SEM (n = 5).
ESK242 and ESK246 inhibit LAT3 via a mixed mode of inhibition.
(A) Increasing doses of ESK242 and ESK246 inhibit [3H]-l-leucine transport in oocytes expressing LAT3 with IC50 values of 281.8 ± 1.3 μM and 146.7 ± 2.4 μM,
respectively. (B–C) [3H]-l-leucine dose
response in the absence or presence of 50 μM or 500 μM
ESK242 (B) or ESK246 (C). Data are fitted to the Michaelis–Menten
equation and normalized to the maximal rate of transport of [3H]-l-leucine alone. An Eadie–Hofstee transformation
was performed (inset, B–C). Data show mean ± SEM (n = 5).In order to investigate
the nature of inhibition of LAT3 by ESK242
and ESK246, leucine dose responses were performed in the absence or
presence of 50 μM and 500 μM of each inhibitor. As the
concentration of inhibitor increases, the Km of leucine for LAT3 (6.3 ± 0.5 mM) increases slightly in the
presence of 50 μM ESK242 (7.5 ± 0.5 mM) but decreases to
2.7 ± 0.5 mM in the presence of 500 μM ESK242 (Figure 4B). In the presence of 50 μM and 500 μM
ESK246, the Km of leucine for LAT3 decreases
to 4.7 ± 0.6 mM and 2.1 ± 0.3 mM, respectively (Figure 4C) suggesting a competitive mechanism of action
for these compounds. The maximal rate of uptake also decreases as
the inhibitor concentration increases, which would not be expected
for a purely competitive inhibitor suggesting that these compounds
may be acting in a mixed competitive/noncompetitive manner. An Eadie–Hofstee
transformation of the data (Figure 4B and C,
inset) also demonstrates that both ESK242 and ESK246 are acting as
mixed inhibitors.
Effects of ESK242 and ESK246 on mTORC1 Signaling
and Cell Growth
in Prostate Cancer Cell Lines
Having established that ESK242
and ESK246 inhibit leucine uptake in LNCaP cells with an IC50 between 8–30 μM (Figure 3A),
we next assessed the downstream effects of leucine deprivation on
signaling and cell growth. Leucine uptake mediated by LAT3 has been
shown to regulate mTORC1 activation in prostate cancer cells.[16] Both ESK242 and ESK246 suppressed phosphorylation
(activation) of the mTORC1 target protein p70S6K (Figure 5A), consistent with a mechanism consequent to inhibition
of LAT3-mediated leucine transport in LNCaP cells. We next examined
cell viability in the presence of compounds using an MTT assay in
prostate cancer cells. Both ESK242 and ESK246 led to lower cell viability
in LNCaP cells after 3 days treatment (Figure 5B). Only compound ESK242, but not ESK246, significantly inhibited
cell viability in PC-3 cells, (SI Figure S6A), which may be due to ESK242 inhibition of both LAT1 and LAT3. To
determine whether decreased cell viability is due to activation of
apoptosis or suppression of proliferation, we first examined apoptosis
using flow cytometry to detect “flipped” Annexin-V protein
levels in the plasma membrane. Cells exposed to UV showed increased
Annexin-V flipping indicative of apoptosis (Figure 5C). Neither ESK242 nor ESK246 induced apoptosis, consistent
with previous studies examining BCH (Figure 5C).[16] Therefore, it is likely that the
effects on viability are mediated through inhibition of cell cycle
and proliferation. To test this, we next examined BrdU (bromodeoxyuridine,
a thymidine analogue) incorporation in DNA using flow cytometry and
showed the BrdU incorporation rate was decreased after BCH, ESK242,
or ESK246 treatment (Figure 5D,E). Compound
ESK246 showed the highest level of inhibition of BrdU incorporation
(4.9%; 17.2% of control), which was significantly lower than either
BCH (14.7%; 51.6% of control) or ESK242 treatment (23.5%; 82.7% of
control; Figure 5E). Our previous studies have
shown that reduced extracellular amino acid levels inhibit expression of the cell cycle
regulator CDK1 and the ubiquitination enzyme UBE2C in prostate cancer
and melanoma.[17,29] Therefore, we examined expression
of CDK1 and UBE2C in the presence of BCH, ESK242, and ESK246, showing
expression of both proteins was down regulated by ESK246 (SI Figure S6B).
Figure 5
Effects of ESK242 and ESK246 in LNCaP
cells. (A) Representative
Western blots (from n = 3) of p70S6K phosphorylation
after BCH (10 mM), ESK242 (50 μM), and ESK246 (50 μM)
inhibition. GAPDH was used as the loading control. (B) MTT cell viability
assay (n = 3) in LNCaP cells incubated with BCH (10
mM), ESK242 (50 μM) and ESK246 (50 μM). Two-way ANOVA
test was performed, **P < 0.01, ***P < 0.001. (C) Analysis of apoptosis (n = 3) in
LNCaP cells using Annexin-V and PI staining after inhibition with
BCH (10 mM), ESK242 (50 μM), and ESK246 (50 μM). (D,E)
Analysis of cell proliferation using BrdU incorporation in LNCaP cells
inhibited with BCH (10 mM), ESK242 (50 μM) and ESK246 (50 μM).
Representative flow cytometry analysis (D) and quantification (E)
from 3 separate experiments are shown. One-way ANOVA test was performed,
*P < 0.05, **P < 0.01, ***P < 0.001.
Effects of ESK242 and ESK246 in LNCaP
cells. (A) Representative
Western blots (from n = 3) of p70S6K phosphorylation
after BCH (10 mM), ESK242 (50 μM), and ESK246 (50 μM)
inhibition. GAPDH was used as the loading control. (B) MTT cell viability
assay (n = 3) in LNCaP cells incubated with BCH (10
mM), ESK242 (50 μM) and ESK246 (50 μM). Two-way ANOVA
test was performed, **P < 0.01, ***P < 0.001. (C) Analysis of apoptosis (n = 3) in
LNCaP cells using Annexin-V and PI staining after inhibition with
BCH (10 mM), ESK242 (50 μM), and ESK246 (50 μM). (D,E)
Analysis of cell proliferation using BrdU incorporation in LNCaP cells
inhibited with BCH (10 mM), ESK242 (50 μM) and ESK246 (50 μM).
Representative flow cytometry analysis (D) and quantification (E)
from 3 separate experiments are shown. One-way ANOVA test was performed,
*P < 0.05, **P < 0.01, ***P < 0.001.
Conclusions
We have utilized a function-based drug
discovery platform that enabled high-throughput screening of LAT3-specific
natural products from the Nature Bank fraction library. Using this
platform, we identified two novel monoterpene glycosides, ESK242,
a dual LAT1 and LAT3 inhibitor, and ESK246, which is more selective
for inhibition of LAT3 in both oocytes and LNCaP cells. Notably, ESK246,
inhibits LAT-mediated leucine transport in LNCaP cells with a ∼500-fold
lower IC50 compared to the leucine analogue BCH. We anticipate
that derivatives of these inhibitors could be used as prostate cancer
therapeutics as well as to investigate the biological function of
LAT1 and LAT3 during development and in disease.
Methods
General Chemical Experimental Procedures
UV spectra
were recorded on a Jasco V650 UV/vis spectrophotometer. NMR spectra
were recorded at 30 °C on either a Varian 500 or 600 MHz Unity
INOVA spectrometer. The latter spectrometer was equipped with a triple
resonance cold probe. The 1H and 13C NMR chemical
shifts were referenced to the solvent peaks for benzene-d6 at δH 7.20 and δC 128.0,
respectively, and for DMSO-d6 at δH 2.50 and δC 39.43, respectively. HRESIMS
were recorded on a Bruker Daltronics Apex III 4.7e Fourier-transform
mass spectrometer. Silica gel chromatography was performed using Merck
silica gel 60 (0.015–0.040 mm). A Waters 600 pump equipped
with a Waters 996 PDA detector and a Waters 717 autosampler were used
for HPLC. A Phenomenex Onyx monolythic column [100 × 10 mm] was
used for semipreparative HPLC separations. All solvents used for chromatography,
UV, and MS were Lab-Scan HPLC grade (RCI Lab-Scan, Bangkok, Thailand),
and the H2O was Millipore Milli-Q PF filtered. All starting
materials and reagents for the synthesis were obtained from commercial
suppliers, Sigma-Aldrich, Carbosynth, Alfa Aesar, Merck Millipore,
and used without further purification. High-performance liquid chromatography
(HPLC) grade solvents were obtained from Labscan, and purified using
a PureSolv MD 5 solvent purification system from Innovative Technology.
Reactions were performed in flame-dried glassware under positive N2 pressure, with magnetic stirring. Rubber septa and syringes
were used for liquid transfers. Thin layer chromatography (TLC) was
performed on 0.25 mm Merck silica gel 60 F254 plates and plates visualized
by staining with Seebach’s stain; phosphomolybdic acid/cerium(IV)
sulfate 2.5:1 in H2O/H2SO4 94:6 (mL).
Plant Material
Pittosporum venulosum (F.
Muell) (Nature Bank code 11711.8) was collected in July 1995
from State Forest 144, Mt. Windsor Tableland, Queensland, Australia.
The plant was identified by P.I. Forster and S.J. Figg. A voucher
specimen (PIF17245) has been lodged with the Queensland Herbarium.
Isolation of ESK246 and ESK242
Pittosporum
venulosum (10 g) was dried, ground, and sequentially extracted
in hexane (250 mL), CH2Cl2 (250 mL) and MeOH
(2 × 250 mL). All extracts were combined and reduced under pressure
to yield a dark green oil (1.62 g). The combined organic extract was
then subjected to a solvent–solvent partition with the compounds
of interest concentrated in the hexane fraction. The hexane fraction
(370 mg) was subjected to flash silica oxide chromatography (10 cm
× 4 cm) eluting with a gradient from 100% hexane to 100% ethyl
acetate (EtOAc). Fraction eluting with 8:2 (hexane/EtOAc) yielded
ESK242 (149 mg, 1.49% dry weight), while the fraction eluting with
6:4 (hexane/EtOAc) yielded ESK246 (58 mg, 0.58% dry weight). The purity
of ESK242 and ESK246 was confirmed by 1H NMR and 13C NMR (SI Figures S7–S10) to be
>95% (SI Table S2).
Humanprostate cancer
cell lines LNCaP-FGC
and PC-3 were purchased from ATCC (Rockville, MD). LNCaP cells have
been passaged directly from original low-passage stocks (2009), and
we confirmed PC-3 cell identity by STR profiling in 2010 (Cellbank).
Cells were cultured in RPMI 1640 medium (Life Technologies) containing
10% (v/v) fetal bovine serum (FBS), penicillin–streptomycin
solution (Sigma-Aldrich), and 1 mM sodium pyruvate (Life Technologies).
Cells were maintained at 37 °C in a fully humidified atmosphere
containing 5% CO2.
Leucine Uptake Assay
The [3H]-l-leucine uptake was performed as
detailed previously.[16] Briefly, cells were
cultured in 6-well plates
in RPMI media. After collecting and counting, cells (3 × 104/well) were incubated with 0.3 μCi [3H]-l-leucine (200 nM; PerkinElmer) in leucine-free RPMI media (Life
Technologies) with 10% (v/v) dialyzed FBS for 15 min at 37 °C.
For high-throughput screening of Nature Bank fractions, LNCaP cells
(104/well) were incubated with 0.3 μCi [3H]-l-leucine (200 nM) in HBSS with 10% (v/v) dialyzed FBS
and 50 mM l-glutamine. Cells were directly added into 96-well
plates containing preloaded fractions from Nature Bank. DMSO 0.5%
(v/v) was used as the negative control and 10 mM BCH was used as the
positive control. Cells were collected, transferred to filter paper
using a 96-well plate harvester (Wallac PerkinElmer), dried, exposed
to scintillation fluid, and counts measured using a liquid scintillation
counter (PerkinElmer).
Cell Viability Assay
Cells in exponential
growth phase
were harvested and seeded (1 × 104/well) in a flat-bottomed
96-well plate. The cells were incubated overnight in RPMI media, prior
to culture with or without each inhibitor. MTT solution (10 μL;
3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrasodium bromide; Millipore)
was added to each well for 4 h, prior to addition of 100 μL
of isopropanol/HCl solution and mixed thoroughly. The plates were
immediately read at 570 nm/630 nm in a PolarStar plate reader (BMG).
Results were plotted as percentages of the absorbance observed in
control wells (vehicle/DMSO).
Oocyte Uptake Assay
HumanLAT1, LAT2, LAT3, LAT4, and
4F2hc cDNAs were subcloned into the oocyte transcription vector pOTV,
respectively. The resulting transporter cDNAs were linearized with SpeI. Complementary RNA (cRNA) was transcribed with T7 RNA
polymerase and capped with 5′-7-methylguanosine using the mMessage
mMachine kit (Ambion). All cRNAs were purified using a NucAway Spin
Column (Ambion).Stage V oocytes were harvested from Xenopus laevis as described previously,[30] and all surgical procedures followed a protocol approved
under the Australian Code of Practice for the Care and Use of Animals
for Scientific Purposes. Oocytes were injected with 23 nL of cRNA
mix containing 1:1 LAT1/4F2hc, LAT2/4F2hc, LAT3, or LAT4 cRNA, respectively
(4.6 ng of cRNA in total), and incubated in standard frog Ringer’s
solution (ND96:96 mM NaCl, 2 mM KCl, 1 mM MgCl2, 1.8 mM
CaCl2, 5 mM HEPES, pH 7.5) supplemented with 50 μg/mL
gentamycin, 2.5 mM sodium pyruvate, and 0.5 mM theophylline at 16–18
°C. Four days after injection, 5 oocytes per group were incubated
in 500 μL of uptake solution (standard frog Ringer’s
solution, ND96) containing 500 nM [3H]-l-leucine
in a final concentration of 1 mM l-leucine for 30 min at
RT. The LAT inhibitor BCH was used at 10 mM and ESK242 and ESK246
were used at various concentrations, as indicated in the text. Uptake was
terminated by three rapid washes in ice-cold ND96 followed by lysis
in 50 mM NaOH and 50% SDS. [3H]-l-leucine uptake
was measured by scintillation counting using a Trilux β-counter
(PerkinElmer Life Science).
Biotinylation Assay
Surface proteins
on Xenopus
laevis oocytes were isolated using the Cell Surface Protein
Isolation Kit (Thermo Scientific Pierce). The oocytes were incubated
for 30 min at 4 °C on an orbital shaker with Sulfo-NHS-SS-biotin.
After three washes with PBS, the oocytes were sonicated in 500 μL
of Lysis buffer containing protease inhibitors. The lysate was incubated
on ice for 30 min and spun for 2 min at 10 000g. The labeled proteins were isolated from the supernatant using NeutrAvidin
agarose and eluted with SDS-PAGE sample buffer containing 50 mM DTT.
The eluted proteins were then analyzed by Western blotting as detailed
below.
BrdU Incorporation Assay
Cells were seeded at a density
of 2 × 105 in 6-well plates and allowed to adhere
overnight. After serum starvation, cells were incubated with either
DMSO, 10 mM BCH, 50 μM ESK242, or 50 μM ESK246 for 22
h. At the end of the treatment, BrdU (150 μg/mL) was added to
culture media and incubated for another 2 h, followed by detachment
using Tryple (Life Technologies). Cells were fixed and stained using
the Becton Dickinson APC BrdU flow cytometry kit (BD). The BrdU antibody
was diluted 1 in 50. Nuclei were counterstained by 7-AAD (7-aminoactinomycin).
The cells were analyzed on a Canto II flow cytometer (BD) with
postanalysis performed using FlowJo software (Tree Star Inc.).
Apoptosis
Assay
Cells were seeded at a density of 2
× 105 in 6-well plates, allowed to adhere overnight,
before incubation with DMSO, 10 mM BCH, 50 μM ESK242, or 50
μM ESK246 for 48 h, respectively. Positive control group cells
were irradiated in a UV Stratalinker 2400 (Stratagene) with a 400 000
μJ dosage and incubated in fresh media for 16 h. Cells were
detached using Tryple and resuspended in 1 mL of binding buffer (HEPES-buffered
PBS supplemented with 2.5 mM calcium chloride) containing antiannexin
V-APC (BD) and incubated for 15 min in the dark at RT. PI solution
(20 μg/mL) was added, and the cells were analyzed on a Canto
II flow cytometer (BD) with postanalysis performed using FlowJo software.
Western Blots
Cells were seeded at a density of 2 ×
105 in 6-well plates, allowed to adhere overnight, before
incubation with DMSO, 10 mM BCH, 50 μM ESK242, or 50 μM
ESK246 for 6 h or 3 d. Cells were lysed by the addition of lysis buffer
(200 μL) with protease inhibitor Cocktail III (Bioprocessing
Biochemical) and 1 mM Na3VO4 (Sigma). Equal
protein (micro-BCA method; Pierce, IL) was loaded on 4–12%
gradient gels (Life Technologies), electrophoresed, and transferred
to PVDF membrane. The membrane was blocked with 2.5% (w/v) BSA in
PBS-Tween20, and incubated with the primary and secondary antibodies.
The secondary HRP-labeled antibodies were detected using enhanced
chemiluminescence reagents (Pierce) on a Kodak Imager (Kodak). Antibodies
used in this study were against LAT1 (Cosmo Bio), LAT3 (a kind gift
from Kunimasa Yan, Kyorin University, Tokyo, Japan), α-tubulin
(Santa Cruz), p-p70S6K, p70S6K, (Cell Signaling), UBE2C (Boston Biochem),
CDK1 and glyceraldehyde-3-phosphate dehydrogenase (GAPDH; Abcam).
Horseradish peroxidase-conjugated donkey antimouse IgG, donkey antirabbit
IgG, and goat antimouse IgM were used as secondary antibodies (Millipore).
Statistical Analysis
Data are expressed as mean ±
SEM. Experiments were performed in triplicate, except where noted
in the Figure Legend. All data were analyzed using a one-way ANOVA
test, apart from MTT assays that used a two-way ANOVA test in GraphPad
Prism v6 (GraphPad Software, Inc.).
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