Literature DB >> 24760753

A peptide panel investigation reveals the acceptor specificity of O-GlcNAc transferase.

Xiaoyan Liu1, Ling Li1, Yuqiu Wang1, Hui Yan1, Xiaofeng Ma1, Peng George Wang1, Lianwen Zhang2.   

Abstract

O-linked β-N-acetylglucosaminylation (O-GlcNAcylation) is widely distributed on nucleocytoplasmic proteins and participates in various physiological processes. But O-GlcNAc status on numerous proteins remains unknown. To better understand this modification, computational analysis combined with experimental study was performed in this work. Structural analysis of many O-GlcNAcylation sites indicated that the modification occurred predominantly in a random coil region. Frequency analysis on many O-GlcNAcylated peptides revealed a signature sequence, PPVS/TSATT, around the modification site (underlined, position 0). Based on the sequence, a peptide panel was designed to investigate key positions affecting O-GlcNAcylation of peptides and their amino acid preference. It was indicated that 3 positions (-2, -1, and +2) had an important role for this modification, where the presence of uncharged amino acids with small side chains could confer high reactivity. The amino acid preference at key positions was further investigated on bovine crystalline α via site-directed mutagenesis. The preferred amino acids were Pro > Ala > Gly at position -2, Ala > Thr > Val > Lys > Pro at position -1, and Ala > Gly > Arg > Glu at position +2. Altogether, these findings suggested that a substrate (peptide or protein) with Pro, Ala at position -2, and/or Val, Ala, Thr, Ser at position -1, and/or Ala, Ser, Pro, Thr, Gly at position +2 would have more chances for O-GlcNAcylation. To test the rule, 2 O-GlcNAcylation sites on sOGT (S52 and T449) were predicted and confirmed by Western blot. The present work systematically investigated the sequence signature for O-GlcNAcylation. The result will contribute to predicting the O-GlcNAc status of a protein and further functional studies. © FASEB.

Entities:  

Keywords:  OGT; amino acid preference

Mesh:

Substances:

Year:  2014        PMID: 24760753     DOI: 10.1096/fj.13-246850

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.191


  14 in total

1.  O-GlcNAcylation of MLL5β is essential for MLL5β-AP-1 transcription complex assembly at the HPV16/18-long control region.

Authors:  Dawn Sijin Nin; Weitai Huang; Muzaffar Ali; Chow Wenn Yew; Tatiana G Kutateladze; Lih-Wen Deng
Journal:  J Mol Cell Biol       Date:  2015-02-10       Impact factor: 6.216

2.  The New Chemical Reporter 6-Alkynyl-6-deoxy-GlcNAc Reveals O-GlcNAc Modification of the Apoptotic Caspases That Can Block the Cleavage/Activation of Caspase-8.

Authors:  Kelly N Chuh; Anna R Batt; Balyn W Zaro; Narek Darabedian; Nicholas P Marotta; Caroline K Brennan; Arya Amirhekmat; Matthew R Pratt
Journal:  J Am Chem Soc       Date:  2017-05-31       Impact factor: 15.419

Review 3.  O-Linked β-N-acetylglucosamine (O-GlcNAc) modification: a new pathway to decode pathogenesis of diabetic retinopathy.

Authors:  Zafer Gurel; Nader Sheibani
Journal:  Clin Sci (Lond)       Date:  2018-01-19       Impact factor: 6.124

4.  Site-Directed Glycosylation of Peptide/Protein with Homogeneous O-Linked Eukaryotic N-Glycans.

Authors:  Zhigang Wu; Kuan Jiang; Hailiang Zhu; Cheng Ma; Zaikuan Yu; Lei Li; Wanyi Guan; Yunpeng Liu; He Zhu; Yanyi Chen; Shanshan Li; Jing Li; Jiansong Cheng; Lianwen Zhang; Peng George Wang
Journal:  Bioconjug Chem       Date:  2016-08-18       Impact factor: 4.774

Review 5.  O-GlcNAc transferase and O-GlcNAcase: achieving target substrate specificity.

Authors:  Alexis K Nagel; Lauren E Ball
Journal:  Amino Acids       Date:  2014-08-31       Impact factor: 3.520

6.  The active site of O-GlcNAc transferase imposes constraints on substrate sequence.

Authors:  Shalini Pathak; Jana Alonso; Marianne Schimpl; Karim Rafie; David E Blair; Vladimir S Borodkin; Osama Albarbarawi; Daan M F van Aalten
Journal:  Nat Struct Mol Biol       Date:  2015-08-03       Impact factor: 15.369

7.  O-GlcNAc Transferase Recognizes Protein Substrates Using an Asparagine Ladder in the Tetratricopeptide Repeat (TPR) Superhelix.

Authors:  Zebulon G Levine; Chenguang Fan; Michael S Melicher; Marina Orman; Tania Benjamin; Suzanne Walker
Journal:  J Am Chem Soc       Date:  2018-03-05       Impact factor: 15.419

8.  O-GlcNAcylation of Thr12/Ser56 in short-form O-GlcNAc transferase (sOGT) regulates its substrate selectivity.

Authors:  Li Liu; Ling Li; Cheng Ma; Yangde Shi; Congcong Liu; Zikang Xiao; Yong Zhang; Fang Tian; Yang Gao; Jie Zhang; Wantao Ying; Peng George Wang; Lianwen Zhang
Journal:  J Biol Chem       Date:  2019-09-16       Impact factor: 5.157

9.  Activity Based High-Throughput Screening for Novel O-GlcNAc Transferase Substrates Using a Dynamic Peptide Microarray.

Authors:  Jie Shi; Suhela Sharif; Rob Ruijtenbeek; Roland J Pieters
Journal:  PLoS One       Date:  2016-03-09       Impact factor: 3.240

10.  A study of the structural properties of sites modified by the O-linked 6-N-acetylglucosamine transferase.

Authors:  Thiago Britto-Borges; Geoffrey J Barton
Journal:  PLoS One       Date:  2017-09-08       Impact factor: 3.240

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