Literature DB >> 24750332

Generative models versus underlying symmetries to explain biological pattern.

S A Frank1.   

Abstract

Mathematical models play an increasingly important role in the interpretation of biological experiments. Studies often present a model that generates the observations, connecting hypothesized process to an observed pattern. Such generative models confirm the plausibility of an explanation and make testable hypotheses for further experiments. However, studies rarely consider the broad family of alternative models that match the same observed pattern. The symmetries that define the broad class of matching models are in fact the only aspects of information truly revealed by observed pattern. Commonly observed patterns derive from simple underlying symmetries. This article illustrates the problem by showing the symmetry associated with the observed rate of increase in fitness in a constant environment. That underlying symmetry reveals how each particular generative model defines a single example within the broad class of matching models. Further progress on the relation between pattern and process requires deeper consideration of the underlying symmetries.
© 2014 The Author. Journal of Evolutionary Biology © 2014 European Society For Evolutionary Biology.

Entities:  

Keywords:  evolutionary genetics; extreme value theory; limiting distributions; mathematical models; systems biology; theoretical biology

Mesh:

Year:  2014        PMID: 24750332     DOI: 10.1111/Jeb.12388

Source DB:  PubMed          Journal:  J Evol Biol        ISSN: 1010-061X            Impact factor:   2.411


  8 in total

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8.  Stochastic tunneling across fitness valleys can give rise to a logarithmic long-term fitness trajectory.

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  8 in total

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