Literature DB >> 24748446

A biocatalytic cascade with several output signals--towards biosensors with different levels of confidence.

Nataliia Guz1, Jan Halámek, James F Rusling, Evgeny Katz.   

Abstract

The biocatalytic cascade based on enzyme-catalyzed reactions activated by several biomolecular input signals and producing output signal after each reaction step was developed as an example of a logically reversible information processing system. The model system was designed to mimic the operation of concatenated AND logic gates with optically readable output signals generated at each step of the logic operation. Implications include concurrent bioanalyses and data interpretation for medical diagnostics.

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Year:  2014        PMID: 24748446      PMCID: PMC4072206          DOI: 10.1007/s00216-014-7789-5

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  11 in total

1.  A biomolecular implementation of logically reversible computation with minimal energy dissipation.

Authors:  J P Klein; T H Leete; H Rubin
Journal:  Biosystems       Date:  1999-10       Impact factor: 1.973

2.  Deoxyribozyme-based logic gates.

Authors:  Milan N Stojanovic; Tiffany Elizabeth Mitchell; Darko Stefanovic
Journal:  J Am Chem Soc       Date:  2002-04-10       Impact factor: 15.419

3.  Analysis of biomarkers characteristic of porcine liver injury--from biomolecular logic gates to an animal model.

Authors:  Lenka Halámková; Jan Halámek; Vera Bocharova; Steven Wolf; Kristine E Mulier; Greg Beilman; Joseph Wang; Evgeny Katz
Journal:  Analyst       Date:  2012-03-12       Impact factor: 4.616

4.  Stochastic computing with biomolecular automata.

Authors:  Rivka Adar; Yaakov Benenson; Gregory Linshiz; Amit Rosner; Naftali Tishby; Ehud Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-23       Impact factor: 11.205

5.  Multianalyte digital enzyme biosensors with built-in Boolean logic.

Authors:  Evgeny Katz; Joseph Wang; Marina Privman; Jan Halámek
Journal:  Anal Chem       Date:  2012-06-08       Impact factor: 6.986

Review 6.  Enzyme-based logic systems for information processing.

Authors:  Evgeny Katz; Vladimir Privman
Journal:  Chem Soc Rev       Date:  2010-03-09       Impact factor: 54.564

7.  Bacteria-based AND logic gate: a decision-making and self-powered biosensor.

Authors:  Zhongjian Li; Miriam A Rosenbaum; Arvind Venkataraman; Tsz Kin Tam; Evgeny Katz; Largus T Angenent
Journal:  Chem Commun (Camb)       Date:  2011-01-04       Impact factor: 6.222

8.  Towards computing with proteins.

Authors:  Ron Unger; John Moult
Journal:  Proteins       Date:  2006-04-01

9.  Reversible molecular logic: a photophysical example of a Feynman gate.

Authors:  Patricia Remón; Rita Ferreira; Jose-Maria Montenegro; Rafael Suau; Ezequiel Pérez-Inestrosa; Uwe Pischel
Journal:  Chemphyschem       Date:  2009-08-24       Impact factor: 3.102

10.  Logic reversibility and thermodynamic irreversibility demonstrated by DNAzyme-based Toffoli and Fredkin logic gates.

Authors:  Ron Orbach; Françoise Remacle; R D Levine; Itamar Willner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-12       Impact factor: 11.205

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  1 in total

1.  A protonic biotransducer controlling mitochondrial ATP synthesis.

Authors:  Z Zhang; H Kashiwagi; S Kimura; S Kong; Y Ohta; T Miyake
Journal:  Sci Rep       Date:  2018-07-12       Impact factor: 4.379

  1 in total

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