Literature DB >> 24747923

Developments in in situ hybridisation.

Andrew Cassidy1, Julia Jones2.   

Abstract

In situ hybridisation (ISH) is an established family of closely related methods for the detection and visualisation of specific nucleic acid sequences (DNA, RNA) in tissue sections, cytological preparations and whole organisms. The technique has a history of refinements and applications going back over several decades and is routinely employed in laboratories where visualisation of gene expression directly within the tissue of interest is necessary. This article will focus on ISH methods for the demonstration of messenger RNA (mRNA) and micro RNA (miRNA) in formalin-fixed paraffin-embedded (FFPE) tissues with emphasis on non-radioactive signal detection strategies currently available.
Copyright © 2014. Published by Elsevier Inc.

Entities:  

Keywords:  Branched DNA amplification; In situ hybridisation; Locked nucleic acid; Rolling circle amplification; Signal amplification; Tissue fixation

Mesh:

Substances:

Year:  2014        PMID: 24747923     DOI: 10.1016/j.ymeth.2014.04.006

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  15 in total

1.  Chromogenic in situ hybridization for the detection of lambda and kappa immunoglobulin light chains as a potential auxiliary diagnostic technique in canine plasmacytomas.

Authors:  Greta Foiani; Claudia Zanardello; Antonio Carminato; Erica Melchiotti; Paola Roccabianca; Marco Tecilla; Marta Vascellari
Journal:  J Vet Diagn Invest       Date:  2020-07-05       Impact factor: 1.279

2.  Quantitative Analysis of Alternative Pre-mRNA Splicing in Mouse Brain Sections Using RNA In Situ Hybridization Assay.

Authors:  Xuan Guo; Yiqing Zhao; Hieu Nguyen; Tonghua Liu; Zhenghe Wang; Hua Lou
Journal:  J Vis Exp       Date:  2018-08-26       Impact factor: 1.355

Review 3.  Tumour heterogeneity: principles and practical consequences.

Authors:  Giorgio Stanta; Stephan Wenzel Jahn; Serena Bonin; Gerald Hoefler
Journal:  Virchows Arch       Date:  2016-07-13       Impact factor: 4.064

Review 4.  Challenges and Opportunities for Immunoprofiling Using a Spatial High-Plex Technology: The NanoString GeoMx® Digital Spatial Profiler.

Authors:  Sharia Hernandez; Rossana Lazcano; Alejandra Serrano; Steven Powell; Larissa Kostousov; Jay Mehta; Khaja Khan; Wei Lu; Luisa M Solis
Journal:  Front Oncol       Date:  2022-06-29       Impact factor: 5.738

5.  Development of a Multiplex Fluorescence in Situ Hybridization Assay to Identify Coinfections in Young-of-the-Year Smallmouth Bass.

Authors:  Heather L Walsh; Vicki S Blazer; Patricia M Mazik
Journal:  J Aquat Anim Health       Date:  2021-10-08       Impact factor: 2.925

Review 6.  Quantitative measurement of cancer tissue biomarkers in the lab and in the clinic.

Authors:  Daniel E Carvajal-Hausdorf; Kurt A Schalper; Veronique M Neumeister; David L Rimm
Journal:  Lab Invest       Date:  2014-12-15       Impact factor: 5.662

7.  Establishment and optimization of mRNA in situ hybridization system in turnip (Brassica rapa var. rapa).

Authors:  Cheng Li; Simin Hu; Qidong Lei; Chongde Wang; Yunqiang Yang; Yongping Yang; Xudong Sun
Journal:  Plant Methods       Date:  2019-10-16       Impact factor: 4.993

8.  Fully Automated RNAscope In Situ Hybridization Assays for Formalin-Fixed Paraffin-Embedded Cells and Tissues.

Authors:  Courtney M Anderson; Bingqing Zhang; Melanie Miller; Emerald Butko; Xingyong Wu; Thomas Laver; Casey Kernag; Jeffrey Kim; Yuling Luo; Henry Lamparski; Emily Park; Nan Su; Xiao-Jun Ma
Journal:  J Cell Biochem       Date:  2016-06-06       Impact factor: 4.429

9.  Comparison of Different In Situ Hybridization Techniques for the Detection of Various RNA and DNA Viruses.

Authors:  Vanessa M Pfankuche; Kerstin Hahn; Rogier Bodewes; Florian Hansmann; André Habierski; Ann-Kathrin Haverkamp; Stephanie Pfaender; Stephanie Walter; Christine Baechlein; Alexander Postel; Eike Steinmann; Paul Becher; Albert Osterhaus; Wolfgang Baumgärtner; Christina Puff
Journal:  Viruses       Date:  2018-07-20       Impact factor: 5.048

10.  A method for manual and automated multiplex RNAscope in situ hybridization and immunocytochemistry on cytospin samples.

Authors:  Sara Chan; Audrey Filézac de L'Etang; Linda Rangell; Patrick Caplazi; John B Lowe; Valentina Romeo
Journal:  PLoS One       Date:  2018-11-20       Impact factor: 3.240

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