Literature DB >> 24747003

Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS.

Wei-Tao Jin1, Xiao-Hua Jin2, André Schuiteman3, De-Zhu Li4, Xiao-Guo Xiang5, Wei-Chang Huang6, Jian-Wu Li7, Lu-Qi Huang8.   

Abstract

The subtribe Orchidinae, distributed predominantly in Eastern Asia and the Mediterranean, presents some of the most intricate taxonomic problems in the family Orchidaceae with respect to generic delimitation. Based on three DNA markers (plastid matK, rbcL, and nuclear ITS), morphological characters, and a broad sampling of Orchidinae and selected Habenariinae mainly from Asia (a total of 153 accessions of 145 species in 31 genera), generic delimitation and phylogenetic relationships within the subtribe Orchidinae and Habenariinae from Asia were assessed. Orchidinae and Asian Habenariinae are monophyletic, and Orchidinae is divided into distinct superclades. Many genera, such as Amitostigma, Habenaria, Hemipilia, Herminium, Platanthera, Peristylus and Ponerorchis, are not monophyletic. Habenaria is subdivided into two distantly related groups, while Platanthera is subdivided into three even more disparate groups. Many previously undetected phylogenetic relationships, such as clades formed by the Amitostigma-Neottianthe-Ponerorchis complex, Platanthera latilabris group, Ponerorchis chrysea, Sirindhornia, and Tsaiorchis, are well supported by both molecular and morphological evidence. We propose to combine Hemipiliopsis with Hemipilia, Amitostigma and Neottianthe with Ponerorchis, Smithorchis with Platanthera, and Aceratorchis and Neolindleya with Galearis, and to establish a new genus to accommodate Ponerorchis chrysea. Tsaiorchis and Sirindhornia are two distinctive genera supported by both molecular data and morphological characters. A new genus, Hsenhsua, and 41 new combinations are proposed based on these findings.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Asia; Generic delimitation; Habenariinae; Molecular phylogenetics; Orchidinae

Mesh:

Substances:

Year:  2014        PMID: 24747003     DOI: 10.1016/j.ympev.2014.04.004

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  5 in total

1.  Phylogeny and classification of the East Asian Amitostigma alliance (Orchidaceae: Orchideae) based on six DNA markers.

Authors:  Ying Tang; Tomohisa Yukawa; Richard M Bateman; Hong Jiang; Hua Peng
Journal:  BMC Evol Biol       Date:  2015-05-26       Impact factor: 3.260

2.  Phylogenetics of subtribe Orchidinae s.l. (Orchidaceae; Orchidoideae) based on seven markers (plastid matK, psaB, rbcL, trnL-F, trnH-psba, and nuclear nrITS, Xdh): implications for generic delimitation.

Authors:  Wei-Tao Jin; André Schuiteman; Mark W Chase; Jian-Wu Li; Shih-Wen Chung; Tian-Chuan Hsu; Xiao-Hua Jin
Journal:  BMC Plant Biol       Date:  2017-11-25       Impact factor: 4.215

3.  Molecular phylogeny and morphology reveal a new epiphytic species of Habenaria (Orchidaceae; Orchideae; Orchidinae) from Nepal.

Authors:  Bhakta Bahadur Raskoti; Rita Ale
Journal:  PLoS One       Date:  2019-10-23       Impact factor: 3.240

4.  DNA barcoding of native Caucasus herbal plants: potentials and limitations in complex groups and implications for phylogeographic patterns.

Authors:  Parvin Aghayeva; Salvatore Cozzolino; Donata Cafasso; Valida Ali-Zade; Silvia Fineschi; Dilzara Aghayeva
Journal:  Biodivers Data J       Date:  2021-01-27

5.  The specific DNA barcodes based on chloroplast genes for species identification of Orchidaceae plants.

Authors:  Huili Li; Wenjun Xiao; Tie Tong; Yongliang Li; Meng Zhang; Xiaoxia Lin; Xiaoxiao Zou; Qun Wu; Xinhong Guo
Journal:  Sci Rep       Date:  2021-01-14       Impact factor: 4.379

  5 in total

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