Literature DB >> 24746795

Regulation of clathrin-mediated endocytosis by dynamic ubiquitination and deubiquitination.

Jasper S Weinberg1, David G Drubin2.   

Abstract

BACKGROUND: Clathrin-mediated endocytosis in budding yeast requires the regulated recruitment and disassociation of more than 60 proteins at discrete plasma membrane punctae. Posttranslational modifications such as ubiquitination may play important regulatory roles in this highly processive and ordered process. However, although ubiquitination plays an important role in cargo selection, functions for ubiquitination of the endocytic machinery are not known.
RESULTS: We identified the deubiquitinase (DUB) Ubp7 as a late-arriving endocytic protein. Deletion of the DUBs Ubp2 and Ubp7 resulted in elongation of endocytic coat protein lifetimes at the plasma membrane and recruitment of endocytic proteins to internal membranes. These phenotypes could be replicated by expressing a permanently ubiquitinated version of Ede1, the yeast Eps15 homolog, which is implicated in endocytic site initiation, whereas EDE1 deletion partially suppressed the DUB deletion phenotype. Both DUBs are capable of deubiquitinating Ede1 in vitro.
CONCLUSIONS: Deubiquitination regulates formation of endocytic sites and stability of the endocytic coat. This regulation appears to occur through Ede1, because permanently ubiquitinated Ede1 phenocopies deletion of UBP2 and UBP7. Moreover, incomplete suppression of the ubp2Δ ubp7Δ phenotype by ede1Δ indicates that ubiquitination and deubiquitination are likely to regulate additional components of the endocytic machinery.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24746795      PMCID: PMC4020423          DOI: 10.1016/j.cub.2014.03.038

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  64 in total

1.  A ubiquitin-binding motif required for intramolecular monoubiquitylation, the CUE domain.

Authors:  Susan C Shih; Gali Prag; Smitha A Francis; Myra A Sutanto; James H Hurley; Linda Hicke
Journal:  EMBO J       Date:  2003-03-17       Impact factor: 11.598

2.  The -4 phenylalanine is required for substrate ubiquitination catalyzed by HECT ubiquitin ligases.

Authors:  Catherine Salvat; Guangli Wang; Anahita Dastur; Nancy Lyon; Jon M Huibregtse
Journal:  J Biol Chem       Date:  2004-02-13       Impact factor: 5.157

3.  Regulation of ubiquitin-binding proteins by monoubiquitination.

Authors:  Daniela Hoeller; Nicola Crosetto; Blagoy Blagoev; Camilla Raiborg; Ritva Tikkanen; Sebastian Wagner; Katarzyna Kowanetz; Rainer Breitling; Matthias Mann; Harald Stenmark; Ivan Dikic
Journal:  Nat Cell Biol       Date:  2006-01-22       Impact factor: 28.824

4.  Molecular mechanisms of coupled monoubiquitination.

Authors:  Tanja Woelk; Barbara Oldrini; Elena Maspero; Stefano Confalonieri; Elena Cavallaro; Pier Paolo Di Fiore; Simona Polo
Journal:  Nat Cell Biol       Date:  2006-10-01       Impact factor: 28.824

5.  Yeast Eps15-like endocytic protein, Pan1p, activates the Arp2/3 complex.

Authors:  M C Duncan; M J Cope; B L Goode; B Wendland; D G Drubin
Journal:  Nat Cell Biol       Date:  2001-07       Impact factor: 28.824

6.  Arrestin-related ubiquitin-ligase adaptors regulate endocytosis and protein turnover at the cell surface.

Authors:  Charles H Lin; Jason A MacGurn; Tony Chu; Christopher J Stefan; Scott D Emr
Journal:  Cell       Date:  2008-10-30       Impact factor: 41.582

7.  Regulation of yeast actin cytoskeleton-regulatory complex Pan1p/Sla1p/End3p by serine/threonine kinase Prk1p.

Authors:  G Zeng; X Yu; M Cai
Journal:  Mol Biol Cell       Date:  2001-12       Impact factor: 4.138

8.  Lysine-63-linked ubiquitination is required for endolysosomal degradation of class I molecules.

Authors:  Lidia M Duncan; Siân Piper; Roger B Dodd; Mark K Saville; Chris M Sanderson; J Paul Luzio; Paul J Lehner
Journal:  EMBO J       Date:  2006-04-06       Impact factor: 11.598

9.  A regulated interaction with the UIM protein Eps15 implicates parkin in EGF receptor trafficking and PI(3)K-Akt signalling.

Authors:  Lara Fallon; Catherine M L Bélanger; Amadou T Corera; Maria Kontogiannea; Elsa Regan-Klapisz; France Moreau; Jarno Voortman; Michael Haber; Geneviève Rouleau; Thorhildur Thorarinsdottir; Alexis Brice; Paul M P van Bergen En Henegouwen; Edward A Fon
Journal:  Nat Cell Biol       Date:  2006-07-23       Impact factor: 28.824

10.  Ubiquitination mediated by the Npi1p/Rsp5p ubiquitin-protein ligase is required for endocytosis of the yeast uracil permease.

Authors:  J M Galan; V Moreau; B Andre; C Volland; R Haguenauer-Tsapis
Journal:  J Biol Chem       Date:  1996-05-03       Impact factor: 5.157

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  19 in total

1.  Cargo-mediated recruitment of the endocytic adaptor protein Sla1 in S. cerevisiae.

Authors:  Thomas O Tolsma; Hallie P Febvre; Deanna M Olson; Santiago M Di Pietro
Journal:  J Cell Sci       Date:  2020-10-12       Impact factor: 5.285

2.  The Budding Yeast Ubiquitin Protease Ubp7 Is a Novel Component Involved in S Phase Progression.

Authors:  Stefanie Böhm; Barnabas Szakal; Benjamin W Herken; Meghan R Sullivan; Michael J Mihalevic; Faiz F Kabbinavar; Dana Branzei; Nathan L Clark; Kara A Bernstein
Journal:  J Biol Chem       Date:  2016-01-06       Impact factor: 5.157

3.  Methods to study endocytic trafficking of the EGF receptor.

Authors:  Itziar Pinilla-Macua; Alexander Sorkin
Journal:  Methods Cell Biol       Date:  2015-07-07       Impact factor: 1.441

4.  New Regulators of Clathrin-Mediated Endocytosis Identified in Saccharomyces cerevisiae by Systematic Quantitative Fluorescence Microscopy.

Authors:  Kristen B Farrell; Caitlin Grossman; Santiago M Di Pietro
Journal:  Genetics       Date:  2015-09-10       Impact factor: 4.562

Review 5.  Clathrin-mediated endocytosis in budding yeast at a glance.

Authors:  Rebecca Lu; David G Drubin; Yidi Sun
Journal:  J Cell Sci       Date:  2016-04-15       Impact factor: 5.285

6.  Motif-based endomembrane trafficking.

Authors:  Deepanksha Arora; Daniёl Van Damme
Journal:  Plant Physiol       Date:  2021-05-27       Impact factor: 8.340

7.  Regulation of the endocytosis and prion-chaperoning machineries by yeast E3 ubiquitin ligase Rsp5 as revealed by orthogonal ubiquitin transfer.

Authors:  Yiyang Wang; Shuai Fang; Geng Chen; Rakhee Ganti; Tatiana A Chernova; Li Zhou; Duc Duong; Hiroaki Kiyokawa; Ming Li; Bo Zhao; Natalia Shcherbik; Yury O Chernoff; Jun Yin
Journal:  Cell Chem Biol       Date:  2021-03-04       Impact factor: 9.039

8.  Control of lipid organization and actin assembly during clathrin-mediated endocytosis by the cytoplasmic tail of the rhomboid protein Rbd2.

Authors:  Christa L Cortesio; Eric B Lewellyn; David G Drubin
Journal:  Mol Biol Cell       Date:  2015-02-18       Impact factor: 4.138

Review 9.  Versatile roles of k63-linked ubiquitin chains in trafficking.

Authors:  Zoi Erpapazoglou; Olivier Walker; Rosine Haguenauer-Tsapis
Journal:  Cells       Date:  2014-11-12       Impact factor: 6.600

10.  Multilevel regulation of an α-arrestin by glucose depletion controls hexose transporter endocytosis.

Authors:  Junie Hovsepian; Quentin Defenouillère; Véronique Albanèse; Libuše Váchová; Camille Garcia; Zdena Palková; Sébastien Léon
Journal:  J Cell Biol       Date:  2017-05-03       Impact factor: 10.539

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