| Literature DB >> 24746178 |
Cuiju Mo, Yu Lu, Yan Deng, Jian Wang, Li Xie, Taijie Li, Yu He, Qiliu Peng, Xue Qin, Shan Li1.
Abstract
BACKGROUND: Lysosome-associated protein transmembrane-4 beta (LAPTM4B) is a novel cancer-related gene. While recent studies have reported that the LAPTM4B polymorphism increased the susceptibility of several cancers, the results remain inconclusive. Therefore, we performed a meta-analysis to systematically summarize the possible association.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24746178 PMCID: PMC4022328 DOI: 10.1186/1471-2156-15-48
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Figure 1Flow chart illustrates the detailed study selection process of this meta-analysis.
Characteristics of all the eligible studies
| Sun | 2008 | PB | Liver cancer | PCR | 190/175 | 0.587 | 72 | 110 | 8 | 99 | 67 | 9 |
| Qi | 2010 | HB | Liver cancer | PCR | 86/78 | 0.799 | 27 | 51 | 8 | 36 | 34 | 7 |
| Zhai | 2012 | PB | Hepatocellular carcinoma | PCR | 102/135 | | 37 | 52 | 13 | | | |
| Wang | 2011 | HB | Primary liver cancer | PCR | 303/515 | 0.941 | 107 | 156 | 40 | 272 | 205 | 38 |
| Deng | 2005 | HB | Lung cancer | PCR | 162/134 | 0.285 | 54 | 91 | 21 | 67 | 59 | 8 |
| Li | 2006 | PB | Lung cancer | PCR | 131/104 | 0.155 | 70 | 56 | 5 | 57 | 36 | 11 |
| Li | 2012 | HB | Breast cancer | PCR | 208/211 | 0.185 | 90 | 100 | 18 | 129 | 76 | 6 |
| Fan | 2012 | HB | Breast cancer | PCR | 732/649 | 0.356 | 326 | 342 | 64 | 346 | 262 | 41 |
| Yang | 2012 | PB | Gallbladder carcinoma | PCR | 91/155 | 0.851 | 34 | 45 | 12 | 88 | 57 | 10 |
| Wang | 2013 | HB | Nasopharyngeal carcinoma | PCR | 134/327 | 0.07 | 74 | 48 | 12 | 163 | 145 | 19 |
| Wang | 2010 | HB | Pancreatic cancer | PCR | 58/156 | 0.977 | 24 | 26 | 8 | 74 | 67 | 15 |
| Xu | 2012 | HB | Ovarian cancer | PCR | 282/365 | 0.64 | 122 | 115 | 45 | 231 | 108 | 26 |
| Meng | 2011 | HB | Cervical carcinoma | PCR | 317/416 | 0.835 | 127 | 153 | 37 | 225 | 163 | 28 |
| Meng | 2013 | HB | Endometrial carcinoma | PCR-RFLP | 283/378 | 0.072 | 93 | 135 | 55 | 200 | 140 | 38 |
| Liu | 2007 | HB | Gastric cancer | PCR | 214/350 | 0.484 | 88 | 107 | 19 | 199 | 133 | 18 |
| Cheng | 2008 | HB | Colon/rectal/esophageal cancer | PCR | 701/350 | 0.484 | 362 | 293 | 46 | 199 | 133 | 18 |
| Sun | 2007 | HB | Lymphoma | PCR | 166/350 | 0.484 | 72 | 71 | 23 | 199 | 133 | 18 |
HB hospital-based, PB population-based, HWE Hardy-Weinberg Equilibrium, PCR polymerase chain reaction, PCR-RFLP polymerase chain reaction–restriction fragment length polymorphism.
Meta-analysis of eligible studies included in the study
| *2 vs. *1 | 17 | 1.53 | 1.37-1.70 | <0.001 | R | 40.26 | 0.001 | 60.3 | 0.705 |
| *2/2 vs. *1/1 | 16 | 2.18 | 1.72-2.75 | <0.001 | R | 27.30 | 0.026 | 45.0 | 0.360 |
| *2/1vs. *1/1 | 16 | 1.62 | 1.41-1.86 | <0.001 | R | 31.27 | 0.008 | 52.0 | 0.595 |
| *2/1 + *2/2 vs. *1/1 | 16 | 1.70 | 1.47-1.97 | <0.001 | R | 38.05 | 0.001 | 60.6 | 0.698 |
| *2/2 vs. *2/1 + *1/1 | 16 | 1.76 | 1.50-2.05 | <0.001 | R | 22.05 | 0.110 | 32.0 | 0.265 |
OR odds ratio, 95% CI 95% confidence interval, R random-effects model.
Figure 2Forest plots of polymorphism and overall susceptibility to multiple cancers in allele genetic model (*2 vs. *1) using a random-effect model.
Stratified analysis of gene polymorphism on cancer susceptibility
| | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Control source | ||||||||||||||||
| HB | 13 | 1.53 (1.36-1.73) | <0.001 | 0.002 | 2.33 (1.96-2.76) | <0.001 | 0.234 | 1.58 (1.36-1.84) | <0.001 | 0.007 | 1.67(1.52-1.83) | <0.001 | 0.001 | 1.86(1.58-2.19) | <0.001 | 0.612 |
| PB | 4 | 1.49 (1.06-2.092) | 0.020 | 0.023 | 1.16 (0.35-3.80) | 0.811 | 0.016 | 1.87 (1.40-2.49) | <0.001 | 0.247 | 1.72(1.09-2.72) | 0.019 | 0.073 | 0.88(0.30-2.54) | 0.806 | 0.029 |
| Cancer type | ||||||||||||||||
| Liver cancer | 4 | 1.66 (1.43-1.94) | <0.001 | 0.714 | 2.15 (1.42-3.25) | <0.001 | 0.312 | 2.03 (1.61-2.57) | <0.001 | 0.847 | 2.06 (1.64-2.58) | <0.001 | 0.963 | 1.52 (1.02-2.24) | 0.037 | 0.220 |
| Lung cancer | 2 | 1.24 (0.63-2.41) | 0.534 | 0.013 | 1.13 (0.13-9.50) | 0.912 | 0.003 | 1.59 (1.11-2.29) | 0.012 | 0.268 | 1.49 (0.77-2.89) | 0.234 | 0.058 | 0.90 (0.14-5.90) | 0.915 | 0.007 |
| Breast cancer | 2 | 1.51 (1.09-2.11) | 0.014 | 0.058 | 2.41 (0.97-6.01) | 0.059 | 0.075 | 1.49 (1.23-1.81) | <0.001 | 0.187 | 1.55 (1.29-1.87) | <0.001 | 0.101 | 1.64 (1.13-2.38) | 0.009 | 0.116 |
| GC | 3 | 1.81 (1.58-2.07) | <0.001 | 0.253 | 2.90 (2.16-3.90) | <0.001 | 0.638 | 1.89 (1.56-2.29) | <0.001 | 0.584 | 2.07 (1.73-2.48) | 0.007 | 0.400 | 2.14 (1.62-2.84) | <0.001 | 0.716 |
| GIC | 4 | 1.26 (0.97-1.65) | 0.084 | 0.008 | 1.49 (0.77-2.88) | 0.236 | 0.024 | 1.33 (1.03-1.73) | 0.030 | 0.084 | 1.36 (1.00-1.84) | 0.050 | 0.020 | 1.32 (0.76-2.30) | 0.331 | 0.069 |
| Others | 4 | 1.39 (1.01-1.92) | 0.043 | 0.020 | 2.32 (1.56-3.46) | <0.001 | 0.257 | 1.26 (0.81-1.96) | 0.316 | 0.020 | 1.39 (0.89-2.19) | 0.150 | 0.011 | 2.10 (1.43-3.09) | <0.001 | 0.546 |
| Histopathologic differentiation | | | ||||||||||||||
| poor | 4 | 1.61 (0.96-2.70) | 0.069 | 0.006 | 2.34 (0.64-8.59) | 0.200 | 0.008 | 2.03 (1.10-3.75) | 0.024 | 0.050 | 2.07 (1.05-4.12) | 0.037 | 0.015 | 1.56 (0.62-3.95) | 0.346 | 0.060 |
| moderate | 4 | 1.29 (0.96-1.72) | 0.091 | 0.341 | 0.98 (0.44-2.20) | 0.959 | 0.333 | 1.83 (1.23-2.74) | 0.003 | 0.527 | 1.67 (1.13-2.47) | 0.010 | 0.341 | 0.73 (0.33-1.59) | 0.425 | 0.523 |
| well | 4 | 1.48 (0.88-2.50) | 0.143 | 0.060 | 2.14 (0.53-8.60) | 0.284 | 0.045 | 1.60 (1.00-2.55) | 0.049 | 0.172 | 1.60 (1.03-2.50) | 0.037 | 0.121 | 1.35 (0.67-2.73) | 0.398 | 0.146 |
| TNM stage | ||||||||||||||||
| I-II | 8 | 1.38 (1.04-1.84) | 0.028 | 0.006 | 1.89 (0.89-4.00) | 0.097 | 0.005 | 1.43 (1.16-1.77) | 0.001 | 0.415 | 1.49 (1.22-1.82) | <0.001 | 0.096 | 1.61 (0.81-3.18) | 0.175 | 0.008 |
| III-IV | 8 | 1.56 (1.31-1.87) | <0.001 | 0.032 | 2.23 (1.67-2.98) | <0.001 | 0.075 | 1.79 (1.40-2.28) | <0.001 | 0.047 | 1.86 (1.44-2.40) | <0.001 | 0.017 | 1.70 (1.29-2.23) | <0.001 | 0.276 |
OR odds ratio, 95% CI 95% confidence interval, P p value for heterogeneity, HB hospital-based, PB population-based, GC Gynecological cancer, GIC Gastrointestinal cancer, TNM Tumor, Node, Metastasis.
Figure 3Funnel plot to assess the publication bias of the meta-analysis in allele genetic model (*2 vs. *1).