Literature DB >> 24744831

New karyologycal data and cytotaxonomic considerations on small mammals from Santa Virgínia (Parque Estadual da Serra do Mar, Atlantic Forest, Brazil).

Camilla Bruno Di-Nizo1, Carolina Lima Neves2, Júlio Fernando Vilela3, Maria José de J Silva1.   

Abstract

Atlantic Forest, in the eastern coast of Brazil, is a hotspot of biodiversity of mammals, and Parque Estadual da Serra do Mar (PESM) is the largest continuous area of this biome. Here, we characterized the karyotype composition of the small mammals from Santa Virgínia, a region in the northern part of PESM. Specimens were collected from July 2008 to September 2009. We identified 17 species (13 rodents and 4 marsupials) from which 7 exhibited species-specific karyotypes, illustrating the importance of karyotype information in cytotaxonomy. We report for first time the karyotype of Monodelphis scalops (Thomas, 1888) and two new records for PESM: Akodon montensis Thomas, 1913 and Brucepattersonius soricinus Hershkovitz, 1998. Cytogenetic polymorphisms were detected for some species trapped in the area. Our results show the importance of Santa Virgínia / PESM in addressing studies for the conservation of small mammal wildlife in the Atlantic Forest.

Entities:  

Keywords:  Atlantic Forest; Monodelphis scalops; conservation; cytotaxonomy

Year:  2014        PMID: 24744831      PMCID: PMC3978240          DOI: 10.3897/CompCytogen.v8i1.6430

Source DB:  PubMed          Journal:  Comp Cytogenet        ISSN: 1993-0771            Impact factor:   1.800


Introduction

The Atlantic Forest is the fourth biodiversity hotspot in the world (Myers et al. 2000, Ceballos and Ehrlich 2006, Carnaval et al. 2009). Geographical aspects combined with the large altitudinal and longitudinal ranges have favored the emergence of high endemism and species richness in this biome (Leal and De Gusmão Câmara 2003, Ribeiro et al. 2009). Nevertheless, the remaining forest represents only approximately 11% of the original extent, which highlights the biome as a priority for biodiversity conservation (Ribeiro et al. 2009). The Parque Estadual da Serra do Mar (PESM), located in the state of São Paulo, Brazil was created in 1977, and is considered the largest remaining block of Atlantic Forest with 315.390 hectares (Instituto Florestal 2006). Studies the mammal fauna of this park are scarce and the majority of the reports were presented in undergraduate theses and master’s dissertations, focusing on large mammals (Wang 2002, Norris et al. 2012). The most comprehensive article about small mammals from PESM was performed in Picinguaba (Northern of PESM) and reported morphology and karyotype information of 27 species belonging to the orders Didelphimorphia, Carnivora, and Rodentia (Pinheiro and Geise 2008). According to Paglia et al. (2012), small mammals of the orders Rodentia and Didelphimorphia are important components of the Atlantic Forest mammal fauna, representing approximately 40% of the species. Morphological studies combined with cytogenetics and geographical distribution information allow the proper identification of taxa, particularly in cases of cryptic or morphologically similar species. Moreover, cytogenetic study can reveal genetic variability within and among individuals. This study aims to characterize the karyotype composition and contribute to the identification of small rodents and marsupials from Santa Virgínia, since there is only one published study focusing on small mammals of this area. Data about geographical distribution of trapped species are also given.

Material and methods

Study area

Santa Virgínia (lat. 23°24.00'S to 23°17.00'S, long. 45°03.00'W to 45°11.00'W) is located in the Northern of PESM (Fig. 1) covering an area of 17,000 hectares (Instituto Florestal 2006), and altitudes ranging from 870 to 1,100 meters (Tabarelli and Mantovani 1999). The vegetation is defined as a dense montane humid forest (‘Floresta PageBreakOmbrófila Densa Montana’) (Veloso et al. 1991) and the annual precipitation is about 2200 mm. The annual mean temperature varies from 18°C to 22°C.
Figure 1.

a Map of Brazil with original Atlantic Forest cover in grey and the region of Parque Estadual da Serra do Mar (PESM) indicated (square) b Parque Estadual da Serra do Mar (PESM) in grey c Santa Virgínia is highlighted (extracted and modified from Instituto Florestal 2006).

a Map of Brazil with original Atlantic Forest cover in grey and the region of Parque Estadual da Serra do Mar (PESM) indicated (square) b Parque Estadual da Serra do Mar (PESM) in grey c Santa Virgínia is highlighted (extracted and modified from Instituto Florestal 2006).

Field work

Small mammals were sampled by commercial live-traps (Sherman and Tomahawk-like traps) and pitfall-traps. In July 2008, a pilot experiment was performed from one to three nights, with a total sampling effort of 300 live-traps/night. From September 2008 to September 2009, field survey was carried out bimonthly during five consecutive nights. During this period, we set up six grids with 30 live-traps per grid and 12 transects of pitfall-traps. Live-traps were arranged in a 0.6 ha grids (60 × 100 m each) with 24 trap stations spaced every 20 meters. Each trap station received one Sherman of different size, randomly set (small, 25 × 7.5 × 9.5 cm; medium, 30 × 7.5 × 9.5 cm; large, 37.5 × 10 × 12 cm; H.B. Sherman Trap®, Inc., Tallahassee, Florida, USA). We also set randomly a Tomahawk-like trap (45 × 16 × 16 cm; Rosaminas Serviço Engenharia e Comércio Ltda. Piraúba, Minas Gerais, Brazil) at six trapping stations. Overall, we had 6300 live-trap/night. The 12 transects of pitfall-traps were pairwise 30 meters apart, from November 2008 to September 2009. Each transect received four plastic buckets (60L, 40 cm top diameter, 35 cm bottom diameter, and 56 cm depth) buried with the rim at ground level, spaced every 10 meters each. The buckets on each line were connected with a 0.5 PageBreakmeters tall plastic drift fence that extended an additional 10 meters at each end, totaling 50 meters of fence. In total, we used 48 buckets, resulting in 1,440 pitfall-traps/night. Different sizes and models of traps were used to optimize the sampling, aiming to reduce the selectivity based on body size and/or habits of the animals. Attractive baits (mashed bananas, peanut butter, bacon and corn meal) were placed in both kinds of traps. All traps were checked daily, preferably on the first hours in the morning. Trapping and handling were carried out under ICMBio licence (number 14428-2) of Instituto Chico Mendes de Conservação da Biodiversidade. Animals were euthanized according to the protocol of the “Animal experimentation ethics” (Carpenter et al. 1996) and under permission of Instituto Butantan Ethics Committee (242/05). The skins, skulls and partial skeletons were deposited in the Museu de Zoologia da Universidade de São Paulo (MZUSP) (still without MZUSP number), Museu Nacional da Universidade Federal do Rio de Janeiro (MN) and Coleção de Mamíferos da Universidade Federal do Espírito Santo (UFES) (Table 1).
Table 1.

A list of cytogenetically studied small mammals from Santa Virgínia, Parque Estadual da Serra do Mar, state of São Paulo, Brazil. N: number of individuals analyzed. Specimens voucher/Museum Field number: ROD and MARS - Laboratório de Ecologia e Evolução Instituto Butantan, Brazil; MN - Museu Nacional, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil; UFES - Coleção de Mamíferos da Universidade Federal do Espírito Santo, Brazil. 2n: diploid number, and FNa: number of autosomes arms. Morphologies: A=acrocentric; M=metacentric; SM=submetacentric; ST=subtelocentric. Grey cells correspond to species-specific karyotypes.

ORDER Family Tribe SpeciesNSpecimens voucher/ museum field numberDistribution2nFNaAutosome pairsaSex chromosomesVariable cytogenetic characteristicsKaryotype referenceFigure No.
ORDER RODENTIA Family Cricetidae Tribe Akodontini Akodon montensis3♀6♂ROD 3*, 6*, 11*, 28*, 29* UFES 2235-2237, 2239From Rio de Janeiro to Rio Grande do Sul and Minas Gerais, Brazil 1, 224, 24 (+ 1B)429 large to medium M/SM; 1 A; 1 small MX: medium A Y: small AX chromosome polymorphism (enlarged short arm), 1 SM B-chromosomeKasahara and Yonenaga-Yassuda (1982)3a
Blarinomys breviceps1♀UFES 2263Endemic of Atlantic Forest, Brazil1, 229 (+2B)5011 medium M/SM 1 A Heteromorphic pair:1 M + 2 AX: large AHeteromorphic pair, 2 M B-chromosomesVentura et al. (2012)See Ventura et al. (2012)
Brucepattersonius soricinus1♀, 1♂MN 78955, 78956Southeastern Brazil, exclusively in Atlantic Forest1, 2, 3525224 medium to small A; 1 small SMX: large ST Y: small A-Bonvicino et al. (1998)3b–d
Thaptomys nigrita2♂ROD 2*, 4*South Bahia to the north of Rio Grande do Sul, Brazil1, 2525224 medium to small A; 1 small SMX: large A Y: small SM-Kasahara and Yonenaga-Yassuda (1984)5a
Tribe Oryzomyini Drymoreomys albimaculatus1♀, 1♂UFES 2271, 2272Endemic of Atlantic Forest, Brazil 4626229 medium to small A; 1 small MX: large SM Y large SM, smaller than the X-Suárez-Villota et al. (2013)See Suárez-Villota et al. (2013)
Euryoryzomys russatus1♀, 7♂ROD 5*, 12*, 30* UFES 2242- 2244, 2265-2266Coastal region of Brazil from Bahia to Rio Grande do Sul1, 2808635 A decreasing in size; 4 small MX: large SM Y: small A or small STSex chromosomes polymorphismsAndrades-Miranda et al. (2000)5b
Nectomys squamipes1♀UFES 2270Eastern Brazil 256 (+2B)5626 A decreasing in size; 1 small MX: large SM2 small SM B-chromosomesSilva and Yonenaga-Yassuda (1998)4a
Oligoryzomys nigripes4♀, 4♂ROD 34*, UFES 2274-2280From South Bahia to Rio Grande do Sul, Brazil1, 26280–8211 M/SM decreasing in size; 19 A decreasing in sizeX: large SM or large M Y: medium M or medium SMPericentric inversions in pair 3, sex chromosomes polymorphismsParesque et al. (2007)4b
Sooretamys angouya1♀, 4♂UFES 2262, 2282-2285From Espírito Santo to Santa Catarina, Brazil2586026 A decreasing in size; 2 small MX: large A Y: medium A-Andrades-Miranda et al. (2000)5c
Tribe Phyllotini Calomys tener1♂UFES 2264Widespread in the state of São Paulo, Brazil1, 2666631 medium to small A; 1 MX: large SM Y: medium A-Mattevi et al. (2005)6a
Tribe Thomasomyini Rhipidomys itoan1♀UFES 2281PESM5, 6445017 A decreasing in size; 1 medium SM; 3 small MX: large SM-Pinheiro and Geise (2008); Costa et al. (2011)4c
Incertae sedis Juliomys pictipes3♂UFES 2267-2269Minas Gerais to Rio Grande do Sul, Brazil1, 2363417 A decreasing in sizeX: medium A Y: small A-Bonvicino and Otazu (1999)6b–c
Family Echimyidae Trinomys iheringi2♀, 1♂ROD 7*, 10*, UFES 2286West of Rio de Janeiro, São Paulo to north of Paraná, Brazil2, 760+1B, 60+4B11629 M or SM decreasing in sizeX: large SM Y: small SM1 or 4 dot-like B-chromosomes; Secondary constriction on pair 7Yonenaga-Yassuda et al. (1985)4d
ORDER DIDELPHIMORPHIA Family Didelphidae Marmosops incanus2♀, 1♂MARS 1*, 5*, 6*Eastern Brazil814246 SM decreasing in sizeX: small SM Y: small A-Carvalho et al. (2002)7a
Micoureus paraguayanus1♀, 1♂MARS 3*, 4*Atlantic Forest; Eastern Brazil, until Rio Grande do Sul state814204 M or SM 2 AX: medium A Y: medium A, smaller than X-Pereira et al. (2008)7b
Monodelphis scalops1♂MN 78961Espírito Santo, Rio de Janeiro and São Paulo, Brazil818304 SM 3 ST 1 AX: small ST Y: minute A-Present study2
Philander frenatus1♀, 1♂UFES 2287-2288From Bahia to Santa Catarina, Brazil8222010 AX: medium A Y: small APereira et al. (2008)7c

Geographic distribution according to: 1. Musser and Carleton (2005); 2. Bonvicino et al. (2008); 3. Bonvicino et al. (1998); 4. Percequillo et al. (2011); 5. De Vivo et al. (2011); 6. Pinheiro and Geise (2008); 7. Woods and Kilpatrick (2005); 8. Gardner (2005).

*Specimens voucher deposited in Museu de Zoologia da Universidade de São Paulo (MZUSP) without catalog number yet. ª Autosomal morphologies do not include Bs.

A list of cytogenetically studied small mammals from Santa Virgínia, Parque Estadual da Serra do Mar, state of São Paulo, Brazil. N: number of individuals analyzed. Specimens voucher/Museum Field number: ROD and MARS - Laboratório de Ecologia e Evolução Instituto Butantan, Brazil; MN - Museu Nacional, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil; UFES - Coleção de Mamíferos da Universidade Federal do Espírito Santo, Brazil. 2n: diploid number, and FNa: number of autosomes arms. Morphologies: A=acrocentric; M=metacentric; SM=submetacentric; ST=subtelocentric. Grey cells correspond to species-specific karyotypes. Geographic distribution according to: 1. Musser and Carleton (2005); 2. Bonvicino et al. (2008); 3. Bonvicino et al. (1998); 4. Percequillo et al. (2011); 5. De Vivo et al. (2011); 6. Pinheiro and Geise (2008); 7. Woods and Kilpatrick (2005); 8. Gardner (2005). *Specimens voucher deposited in Museu de Zoologia da Universidade de São Paulo (MZUSP) without catalog number yet. ª Autosomal morphologies do not include Bs. The nomenclature used in this work follows Gardner (2005), Musser and Carleton (2005), Weksler et al. (2006) and Percequillo et al. (2011). External morphologic traits of marsupials were compared with voucher specimens preserved at MZUSP.

Chromosome preparation

Metaphases were obtained from bone marrow and spleen after in vivo injection of a 0.1% colchicine solution (1mL/100g of weight). Cells were suspended in 0.075M KCl solution for 20 minutes at 37°C and fixed in three washes of methanol: acetic acid (3:1). GTG and CBG-banding were performed according to Seabright (1971) and Sumner (1972), respectively. At least 20 metaphases per individual were analyzed to define the diploid number (2n) and fundamental number of autosome arms (FNa). Chromosomes were measured using the program ImageJ version 1.46 (Rasband 2011) to establish the fundamental number, according to Levan et al. (1964). Karyotypes were set up according to the literature, when available. Specimen identification was carried out through a comparison of our data with previous cytogenetic information, external morphological characteristics, and geographic distribution (see Table 1 references).

Results

A total of 706 small mammal specimens were captured (600 rodents and 106 marsupials) and 54 specimens were selected for chromosome preparations (46 rodents and 8 marsupials, Table 1). On the whole, 13 species of rodents belonging to two families were cytogenetically analyzed (Table 1): Thomas, 1913; (Winge, 1887)PageBreak; Hershkovitz, 1998; (Lichtenstein, 1829); Percequillo, Weksler & Costa, 2011; (Wagner, 1848); (Brants, 1827); (Olfers, 1818); (Fischer, 1814); (Winge, 1887); Costa, Geise, Pereira and Costa, 2011; (Osgood, 1933) of family Cricetidae, and (Thomas, 1911) of family Echimyidae. Four marsupial species (Didelphimorphia) were karyotyped: (Lund, 1840); (Tate, 1931); (Thomas, 1888) and (Olfers, 1818) (Table 1).

First cytogenetic information for

Eight individuals were collected, although only one male had been cytogenetically studied. Morphological data and geographic distribution comparisons allow us to identify all as . The morphological traits of these individuals are similar to voucher specimens of preserved at MZUSP under catalogue numbers 1528, 30702, 30712 and 30757. This species has also been reported in São Paulo state, Brazil (Gardner 2005), agreeing to our collecting site (Fig. 1). Here we present, for the first time, the karyotype of . The karyotype of a male showed 2n=18, FNa=30. Pair 1 is a large submetacentric, pair 2 is a medium metacentric, pairs 3, 4 and 6 are medium subtelocentric, pair 5 is a medium acrocentric and pairs 7 and 8 are medium submetacentric. X chromosome is a small subtelocentric, and the Y is a minute acrocentric (Fig. 2). The short arm of pairs 4 and 6 are difficult to see depending on the condensation of the chromosome and so it was necessary to analyze and measure more than 30 metaphases to define their morphology.
Figure 2.

Conventional stained karyotype of (2n=18, FNa=30, male). Bar = 10µm.

Conventional stained karyotype of (2n=18, FNa=30, male). Bar = 10µm.

New records for PESM

Cytogenetic data helped us to report for first time the presence of , and in PESM. Cytogenetic information of these species are shown in Fig. 3, Table 1. Briefly, showed 2n=24, 25 (24+1B), FNa=42 and one individual showed a heteromorphic X chromosome with an enlarged short arm. We also detected one small supernumerary submetacentric (B) in three out of nine individuals analyzed (Fig. 3a).
Figure 3.

Karyotypes of the new records for PESM. a Conventional stained karyotype of (2n=24+1B, FNa=42, male) b Conventional stained karyotype of (2n=52, FNa=52, female). Inset: sex chromosomes of a male c CBG-banding pattern of (2n=52, FNa=52, female) d GTG-banding pattern of (2n=52, FNa=52, female). Bar = 10µm.

Karyotypes of the new records for PESM. a Conventional stained karyotype of (2n=24+1B, FNa=42, male) b Conventional stained karyotype of (2n=52, FNa=52, female). Inset: sex chromosomes of a male c CBG-banding pattern of (2n=52, FNa=52, female) d GTG-banding pattern of (2n=52, FNa=52, female). Bar = 10µm. had 2n=52, FNa=52 (Fig. 3b) and this is the first time that banding-pattern is presented in this species. The CBG-banding pattern in the female specimen showed rather pronounced amount of pericentromeric heterochromatin in all chromosomes (Fig. 3c). GTG-banding allowed the identification of all autosomic pairs and X chromosomes (Fig. 3d).

Chromosomal variability and species-specific karyotypes

The remaining species studied in this work have already been recorded in PESM and their karyotypes are in accordance to the literature. Karyotype information of all species analyzed and the chromosomal variability found in this work is shown in Table 1 and Figs 4–7.
Figure 4.

CBG-banding pattern of (2n=56 + 2B, FNa=56, female) b Conventional stained karyotype of (2n=62, FNa=80, male). Inset: different forms of pair 3: heteromorphic (3H) and homomorphic metacentric (3M) c Conventional stained karyotype of (2n=44, FNa=50, female) d Conventional stained karyotype of (2n=60+4Bs, FNa=116, female). Inset: sex chromosomes of a male. Bar = 10µm.

Figure 5.

Conventional stained karyotypes: a (2n=52, FNa=52, male) b (2n=80, FNa=86, male) c (2n=58, FNa=60, male). Bar = 10µm.

Figure 6.

a Conventional stained karyotype of (2n=66, FNa=66, male). Inset: Sex chromosomes CBG-banded b Conventional stained karyotype of (2n=36, FNa=36, male) c GTG-banding pattern of (2n=36, FNa=36, male). Bar = 10µm.

Figure 7.

a CBG-banding pattern of (2n=14, FNa=24, male) b Conventional stained karyotype of (2n=14, FNa=20, male) c Conventional stained karyotype of (2n=22, FNa=20, male). Bar = 10µm.

CBG-banding pattern of (2n=56 + 2B, FNa=56, female) b Conventional stained karyotype of (2n=62, FNa=80, male). Inset: different forms of pair 3: heteromorphic (3H) and homomorphic metacentric (3M) c Conventional stained karyotype of (2n=44, FNa=50, female) d Conventional stained karyotype of (2n=60+4Bs, FNa=116, female). Inset: sex chromosomes of a male. Bar = 10µm. Conventional stained karyotypes: a (2n=52, FNa=52, male) b (2n=80, FNa=86, male) c (2n=58, FNa=60, male). Bar = 10µm. a Conventional stained karyotype of (2n=66, FNa=66, male). Inset: Sex chromosomes CBG-banded b Conventional stained karyotype of (2n=36, FNa=36, male) c GTG-banding pattern of (2n=36, FNa=36, male). Bar = 10µm. a CBG-banding pattern of (2n=14, FNa=24, male) b Conventional stained karyotype of (2n=14, FNa=20, male) c Conventional stained karyotype of (2n=22, FNa=20, male). Bar = 10µm. Seven out of the 13 rodent species showed species-specific karyotypes: , , , , , PageBreakPageBreakPageBreakPageBreak and (grey cells in Table 1). The identification of the remaining species (, , , , , and ) required additional morphological and molecular investigation and geographic distribution information (Table 1). Marsupials presented conserved diploid numbers of 14, 18 and 22 and were identified here by external morphological comparisons.

Discussion

Importance of cytogenetic study for Neotropical rodents

We proved the cytogenetic analyses as a taxonomic tool, since 7 out of 13 rodent species present species-specific karyotypes (53.8%). Besides, we identified 94% of all species, when cytogenetic data were combined with information of external morphology and geographical distribution (Table 1). Cryptic species are relatively common in some Neotropical rodent groups and cytogenetic information was indispensable for identifying such species. For instance, is morphologically indistinguishable from (Winge, 1887) and both species occur in sympatry in the Atlantic Forest (Christoff et al. 2000). In addition, the occurrence of previously recorded in Santa Virgínia/PESM (Instituto Florestal 2006) was doubtful till this study, as we proved the occurrence of by karyotypic analysis. Another cryptic species case occurs in the genus . sp. (2n=50) and (2n=52) are morphologically identical, so the karyotypes are the diagnostic information to distinguish both species (Ventura et al. 2004, 2010). By contrast, and present very similar karyotypes (2n=52, FNa=52) however their identification can be safely done at the level of genera by external morphological characters. An accurate observation on the karyotypes of and showed that the pair 1 of is the largest of the chromosome set (Fig. 5a) meanwhile has the pair 1 similar in size to the others of the set (Figs 3b–d). We also noticed differences regarding sex chromosome morphologies of both species (Table 1). This feature could be a diagnostic tool to differentiate each karyotype, but additional cytogenetic studies (including comparative and molecular cytogenetic data) are needed to support these first observations. presents a peculiar karyotype and it could not be considered species-specific due to the great variability in 2n and FNa (Geise et al. 2008, Ventura et al. 2012). Moreover, Ventura et al. (2012) suggested the existence of more species for the monotypic genus in Atlantic Forest since molecular phylogenetic analyses showed two geographically distinct lineages. does not have species-specific karyotype also. Musser, Carleton, Brothers and Gardner, 1998, and (Thomas, 1884) share PageBreakthe same 2n=80, NFa=86 (Bonvicino and Geise 2006). However, when cytogenetic information is combined with morphologic and geographic distribution data, can be confirmed. Concerning , it is not possible to affirm that this species possess species-specific karyotype with classical cytogenetic data because, when compared to (Desmarest 1819), both karyotypes are identical (Yonenaga-Yassuda et al. 1987). Nevertheless, the association of cytogenetic, geographic distribution and external morphological characters allows the recognition of as occurring at PESM (Bonvicino et al. 2008). was considered for years as a carrier of two basic distinct karyotypes: 2n=56 (1 to 3Bs) and 2n=52 (1 to 3Bs), and only after crossings in laboratory, Bonvicino et al. (1996) noticed that two different species could be diagnosed - (2n=56) and (Pelzeln, 1883), (2n=52). The karyotype of presented here (2n=44, FNa=50 Fig. 4c) is the same one as described by Zanchin et al. (1992) and Silva and Yonenaga-Yassuda (1999). Pinheiro and Geise (2008) also found an identical karyotype for a species referred as sp., trapped in Picinguaba (PESM), and De Vivo et al. (2011) PageBreakPageBreakreported an undescribed species of that occurs at the Parque Estadual da Serra do Mar. Recently, two new species from Atlantic Forest were described: Costa, Geise, Pereira and Costa, 2011 and ; and the latter presented 2n=44, FNa=48, 49, 50 (Costa et al. 2011). Santa Virgínia is embedded in the geographical distribution described for this species and molecular analyzes confirmed that this sample belongs to species. Nevertheless, we do not consider this karyotype species-specific. Finally, cytogenetic analysis was useful in identifying as two species – and (Günther, 1876) - occur in Atlantic Forest. Despite the regular chromosome set of (not considering B chromosomes) is identical to the one described for the species (2n=60, FNa=116) by Pessoa et al. (2005), the presence of at least one B and the morphology of Y chromosome in represent good characters to diagnose the species.

Chromosome variations

Mammals have remarkable diversity in species karyotypes, and rodents exhibit noteworthy variability of diploid chromosome number (O’Brien et al. 2006, Romanenko et al. 2012). For instance, in this work, diploid numbers of rodents ranged from 24 in to 80 in . The chromosome variation observed here is due to the presence of supernumerary chromosomes (B chromosomes), sex chromosome heteromorphism and/or polymorphism, as well as autosomal polymorphisms. This chromosome variability does not cause a problem in characterizing the species, except in the case of , in which the presence of at least one B chromosome is sufficient to confirm its identity. Structural rearrangements may explain much of the observed karyotype diversity in rodents. In this regard, Robertsonian fusions/fissions (whole-arm translocations) and pericentric inversions, have long been considered the predominant rearrangements in natural populations of rodents (Patton and Sherwood 1983). Nevertheless, studies with more refined techniques such as fluorescent in situ hybridization and chromosome painting demonstrate that tandem fusions, reciprocal translocations, and paracentric inversions are much more common than previously thought (Hass et al. 2008, Ventura et al. 2009, Romanenko et al. 2012). Our data showed two species with pericentric inversion rearrangements, and . showed variation in autosomal pair 3 (Fig. 4b) but this rearrangement had also been reported in pairs 2, 4 and 8, which places this species as one of the most polymorphic within Neotropical rodents (Paresque et al. 2007). The genus frequently shows 2n=44, except for the 2n=50 reported by Silva and Yonenaga-Yassuda (1999) from Amazonas, in contrast with differences in the FNa (Zanchin et al. 1992, Costa et al. 2011). The variation of FNa, which represents the commonest chromosome change observed for the genus, may be a consequence of pericentric inversion events. Karyotype diversity is also enhanced in mammals due to the presence of B chromosomes. B chromosomes are extra elements found in the karyotypes of many eukaryotic species. Their functions and molecular composition remain obscure but, apparently in mammals, these chromosomes neither promote phenotypic alterations nor affect fitness of individuals (Jones and Rees 1982, Trifonov et al. 2010). B chromosomes are known in nine Brazilian rodent species (Silva and Yonenaga-Yassuda 2004, Ventura et al. 2012)PageBreak. Herein, we found B chromosomes in four out of 13 species of rodents (30,76%, i.e. almost a third of the total): , , and . Silva and Yonenaga-Yassuda (2004) found B chromosomes in (referred at that time as ), however, in our sample, B chromosomes were not observed for this species (Fig. 5c). Sex chromosome heteromorphisms/polymorphisms were found in and , and the variation is due to addition/deletion of constitutive heterochromatin, as described by Kasahara and Yonenaga-Yassuda (1982) and Paresque et al. (2007), respectively.

Marsupials

Cytogenetic data exposed three diploid numbers for the family Didelphidae: 2n=14, 18 and 22 (Reig et al. 1977, Carvalho et al. 2002). As the karyotypes of American marsupials are conserved, cytogenetic analyses cannot be considered as a diagnostic tool to identify species. However, differences in banding patterns could help in the characterization of some taxa, for instance, (Svartman 2009). In the present paper we report for the first time the karyotype of which is similar to the one described for Pine, 1975 and (Erxleben, 1777) by Carvalho et al. (2002), except for the morphology of the sex chromosomes (Fig. 2). Besides, karyotype differs from (Thomas, 1899) (2n=18, FNa=32) (Pereira et al. 2008) due to the presence of one acrocentric pair (#5) instead of a biarmed pair (Fig. 2).

Final considerations

Our species list is an evidence of the limited knowledge of small mammals in PESM since the karyotype of is reported for the first time and and are new records for the park. According to De Vivo et al. (2011), it is important to increase samples in areas of dense humid forest since these areas are poorly surveyed. The number of species collected during the period of 14 months in Santa Virgínia should be considered highly representative, and this effort brought to light new findings. This includes the specimen of herein mentioned which was added to a larger sample with animals collected from different localities of Brazil and the diploid numbers ranged from 28 to 52 (Ventura et al. 2012), as well as which was studied by Suárez-Villota et al. (2013). The improvements to the list of mammals of PESM could be attributed to different methods of capture (live and pitfall traps) to enhance the success of trapping in different habitats. The multidisciplinary approach employed is also evidently important in some PageBreakcases as presented above. Additionally, data on diversity and geographical distribution of species are essential to reach conservation strategies, and the significance of Santa Virgínia / PESM in the preservation of the Neotropical fauna becomes more clear.
  17 in total

1.  Biodiversity hotspots for conservation priorities.

Authors:  N Myers; R A Mittermeier; C G Mittermeier; G A da Fonseca; J Kent
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

2.  Autosomal and sex chromosomal polymorphisms with multiple rearrangements and a new karyotype in the genus Rhipidomys (Sigmodontinae, Rodentia).

Authors:  M J Silva; Y Yonenaga-Yassuda
Journal:  Hereditas       Date:  1999       Impact factor: 3.271

Review 3.  Chromosomal evolution in Rodentia.

Authors:  S A Romanenko; P L Perelman; V A Trifonov; A S Graphodatsky
Journal:  Heredity (Edinb)       Date:  2011-11-16       Impact factor: 3.821

4.  [Supernumerary chromosomes, segmental duplications, and evolution].

Authors:  V A Trifonov; P V Dement'eva; V R Beklemisheva; D V Iudkin; N V Vorob'eva; A S Grafodatskiĭ
Journal:  Genetika       Date:  2010-09

5.  Stability predicts genetic diversity in the Brazilian Atlantic forest hotspot.

Authors:  Ana Carolina Carnaval; Michael J Hickerson; Célio F B Haddad; Miguel T Rodrigues; Craig Moritz
Journal:  Science       Date:  2009-02-06       Impact factor: 47.728

6.  Global mammal distributions, biodiversity hotspots, and conservation.

Authors:  Gerardo Ceballos; Paul R Ehrlich
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

7.  Chromosome homologies of the highly rearranged karyotypes of four Akodon species (Rodentia, Cricetidae) resolved by reciprocal chromosome painting: the evolution of the lowest diploid number in rodents.

Authors:  Karen Ventura; Patricia C M O'Brien; Yatiyo Yonenaga-Yassuda; Malcolm A Ferguson-Smith
Journal:  Chromosome Res       Date:  2009-11-20       Impact factor: 5.239

8.  First cytogenetic information for Drymoreomys albimaculatus (Rodentia, Cricetidae), a recently described genus from Brazilian Atlantic Forest.

Authors:  Elkin Y Suárez-Villota; Camilla B Di-Nizo; Carolina L Neves; Maria José de Jesus Silva
Journal:  Zookeys       Date:  2013-05-21       Impact factor: 1.546

9.  Thaptomys Thomas 1915 (Rodentia, Sigmodontinae, Akodontini) with karyotypes 2n = 50, FN = 48, and 2n = 52, FN = 52: Two monophyletic lineages recovered by molecular phylogeny.

Authors:  Karen Ventura; Maria José de Jesus Silva; Yatiyo Yonenaga-Yassuda
Journal:  Genet Mol Biol       Date:  2010-06-01       Impact factor: 1.771

10.  American marsupials chromosomes: Why study them?

Authors:  Marta Svartman
Journal:  Genet Mol Biol       Date:  2009-12-01       Impact factor: 1.771

View more
  4 in total

Review 1.  Advances in cytogenetics of Brazilian rodents: cytotaxonomy, chromosome evolution and new karyotypic data.

Authors:  Camilla Bruno Di-Nizo; Karina Rodrigues da Silva Banci; Yukie Sato-Kuwabara; Maria José de J Silva
Journal:  Comp Cytogenet       Date:  2017-12-21       Impact factor: 1.800

2.  Chromosomal variation in Argentine populations of Akodon montensis Thomas, 1913 (Rodentia, Cricetidae, Sigmodontinae).

Authors:  Matías Maximiliano Malleret; Carolina Alicia Labaroni; Gabriela Verónica García; Juan Martín Ferro; Dardo Andrea Martí; Cecilia Lanzone
Journal:  Comp Cytogenet       Date:  2016-02-02       Impact factor: 1.800

3.  Trophic Niche Differentiation in Rodents and Marsupials Revealed by Stable Isotopes.

Authors:  Mauro Galetti; Raisa Reis Rodarte; Carolina Lima Neves; Marcelo Moreira; Raul Costa-Pereira
Journal:  PLoS One       Date:  2016-04-06       Impact factor: 3.240

4.  Karyotypes of Brazilian non-volant small mammals (Didelphidae and Rodentia): An online tool for accessing the chromosomal diversity.

Authors:  Roberta Paresque; Jocilene da Silva Rodrigues; Kelli Beltrame Righetti
Journal:  Genet Mol Biol       Date:  2018-06-28       Impact factor: 1.771

  4 in total

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