Literature DB >> 24740794

Solution NMR studies reveal no global flexibility in the catalytic domain of CDC25B.

George Lund1, Tomasz Cierpicki.   

Abstract

The CDC25B phosphatase is a critical regulator of the cell cycle and has been validated as an important therapeutic target in cancer. Previous studies using molecular dynamics simulations have concluded that the catalytic domain of CDC25B may experience a significant degree of dynamics or be partially disordered in solution, a finding that has a pronounced impact on the structure-based development of CDC25B inhibitors. We have probed the backbone dynamics of the CDC25B catalytic domain in solution using NMR relaxation experiments and found that the core of the protein is relatively rigid and does not experience any large-scale dynamics over a broad range of time scales. Furthermore, based on residual dipolar coupling measurements we have concluded that the conformation in solution is very similar to that observed in the crystal form. Importantly, these findings rationalize the application of the CDC25B crystal structure in structure-based drug development.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  CDC25B; NMR dynamics; RDC; model-free analysis; protein dynamics; protein structure

Mesh:

Substances:

Year:  2014        PMID: 24740794      PMCID: PMC4201642          DOI: 10.1002/prot.24581

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  23 in total

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  2 in total

1.  Identification of the quinolinedione inhibitor binding site in Cdc25 phosphatase B through docking and molecular dynamics simulations.

Authors:  Yushu Ge; Marc van der Kamp; Maturos Malaisree; Dan Liu; Yi Liu; Adrian J Mulholland
Journal:  J Comput Aided Mol Des       Date:  2017-10-09       Impact factor: 3.686

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Journal:  ACS Chem Biol       Date:  2014-12-01       Impact factor: 5.100

  2 in total

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