| Literature DB >> 24740266 |
Els Willems1, Tjing-Tjing Hu2, Laura Soler Vasco3, Johan Buyse1, Eddy Decuypere1, Lutgarde Arckens2, Nadia Everaert4.
Abstract
Different animal models have been used to study the effects of prenatal protein undernutrition and the mechanisms by which these occur. In mammals, the maternal diet is manipulated, exerting both direct nutritional and indirect hormonal effects. Chicken embryos develop independent from the hen in the egg. Therefore, in the chicken, the direct effects of protein deficiency by albumen removal early during incubation can be examined. Prenatal protein undernutrition was established in layer-type eggs by the partial replacement of albumen by saline at embryonic day 1 (albumen-deprived group), compared to a mock-treated sham and a non-treated control group. At hatch, survival of the albumen-deprived group was lower compared to the control and sham group due to increased early mortality by the manipulation. No treatment differences in yolk-free body weight or yolk weight could be detected. The water content of the yolk was reduced, whereas the water content of the carcass was increased in the albumen-deprived group, compared to the control group, indicating less uptake of nutrients from the yolk. At embryonic day 16, 20 and at hatch, plasma triiodothyronine (T3), corticosterone, lactate or glucose concentrations and hepatic glycogen content were not affected by treatment. At embryonic day 20, the plasma thyroxine (T4) concentrations of the albumen-deprived embryos was reduced compared to the control group, indicating a decreased metabolic rate. Screening for differential protein expression in the liver at hatch using two-dimensional difference gel electrophoresis revealed not only changed abundance of proteins important for amino acid metabolism, but also of enzymes related to energy and glucose metabolism. Interestingly, GLUT1, a glucose transporter, and PCK2 and FBP1, two out of three regulatory enzymes of the gluconeogenesis were dysregulated. No parallel differences in gene expressions causing the differences in protein abundance could be detected pointing to post-transcriptional or post-translational regulation of the observed differences.Entities:
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Year: 2014 PMID: 24740266 PMCID: PMC3989345 DOI: 10.1371/journal.pone.0094902
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
List of primers used for quantification of the genes of interest and reference genes.
| Gene | Accession number | 5′-primer-3′ | Tm (°C) | Size (bp) | Efficiency (%) | |
| PCK2 | NM_205470 | F |
| 61.7 | 62 | 102.7 |
| R |
| 60.7 | ||||
| PCK1 | NM_205471 | F |
| 59.5 | 91 | 105.1 |
| R |
| 59.1 | ||||
| FBP1 | NM_001278048 | F |
| 59.8 | 56 | 95.6 |
| R |
| 59.8 | ||||
| HIBADH | NM_001006362 | F |
| 60.0 | 84 | 99.4 |
| R |
| 59.9 | ||||
| ACTB | NM_205518 | F |
| 61.5 | 75 | 103.3 |
| R |
| 60.9 | ||||
| PPID | XM_426283 | F |
| 60.0 | 93 | 101.8 |
| R |
| 58.4 |
For every gene the NCBI accession number, the sequences and the theoretical melting temperature (Tm, °C) of the forward (F) and reverse primer (R), the size of the amplified fragment (bp) and the efficiency of amplification (%) are provided.
Survival percentage (%), early, mid and late mortality (%) and infertility (%) of the eggs of the control, sham and albumen-deprived group.
| Item (%) | control | sham | albumen-deprived | P-value |
| Survival | 87.7a | 69.3b | 38.1c | <0.001 |
| Early mortality | 7.0a | 25.4b | 55.7c | <0.001 |
| Mid mortality | 0.0 | 0.0 | 0.5 | NS |
| Late mortality | 5.3 | 5.3 | 5.7 | NS |
| Infertility | 2.6 | 4.2 | 2.3 | NS |
Number of fertile eggs in control (n = 144), sham (n = 144) and albumen-deprived group (n = 240).
Within a row, treatment means with different superscript are significantly different (P<0.001). P-values of effect of treatment are added in a separate column.
Survival (%) = (number of hatched chicks/number of fertile eggs)*100
Mortality (%) = (number of dead eggs/number of fertile eggs)*100
Infertility (%) = (number of infertile eggs/total number of set eggs) *100
Yolk-free body weight (YFWB) (g), relative YFBW to egg weight at embryonic day 1 (ED1) (%), absolute (g) and relative residual yolk to egg weight at ED1 (%) at ED 16, 20 and at hatch of the control, sham, and albumen-deprived group (n = 15 per group per age).
| control | sham | albumen-deprived | P-value treatment | P-value age | P-value interaction | ||||
| Mean | SEM | Mean | SEM | Mean | SEM | ||||
| YFBW weight (g) | 28.7 | 1.3 | 29.0 | 1.3 | 28.5 | 1.4 | NS | <0.001 | NS |
| Relative YFBW weight (%) | 48.3 | 2.2 | 47.6 | 2.2 | 47.0 | 2.2 | NS | <0.001 | NS |
| Residual yolk weight (g) | 9.0 | 0.5 | 9.1 | 0.5 | 8.8 | 0.5 | NS | <0.001 | NS |
| Relative residual yolk weight (%) | 14.9 | 0.7 | 14.7 | 0.7 | 14.8 | 0.8 | NS | <0.001 | NS |
| Water content residual yolk (%) | 52.4a | 0.5 | 51.8ab | 0.4 | 50.8b | 0.4 | 0.016 | NS | NS |
Within a row, treatment means with different superscript are significantly different (P<0.05). P-values of effect of treatment, age and interaction are added in separate columns. Data are shown as mean ± SEM.
Figure 1Plasma thyroid hormones.
T3 (A) and T4 (B) concentrations (ng/mL) of the control, sham and the albumen-deprived chicks at embryonic day (ED) 16, ED 20 and at hatch (n = 15). Data are shown as mean ± SEM.a–b Treatment means differ per timepoint (P<0.05).
Figure 2Glycogen in the liver.
Hepatic glycogen content (ng) of the control, sham and the albumen-deprived chicks at embryonic day (ED) 16, ED 20 and at hatch (n = 12). Data are shown as mean ± SEM.
Figure 3Hepatic proteome of the newly-hatched chick.
Visualization of the total number of spots in the hepatic proteome of the newly-hatched chick on a Cy2 image (pooled sample) of an analytic two-dimensional gel electrophoresis (2-D DIGE) gel.
Identification with LC-MS/MS of the proteins present in the 4 upregulated and 4 downregulated spots in the liver of albumen-deprived chicks at hatch compared to either the control chicks or the sham chicks or both (n = 6).
| Gene | Full name | Spot | Uniprot ID | pI | Mass(kDa) | Mascot Score | Queries | Coverage(%) | Location | control | sham | albumen-deprived | P-value |
|
| |||||||||||||
| HSPA9 | Stress-70 protein, mitochondrial precursor | 407 | Q5ZM98 | 6.09 | 73,2 | 188 | 5 | 10 | Mt | 1.00±0.09b | 1.10±0.07ab | 1.44±0.12a | 0.010 |
| ALB | Serum albumin | P19121 | 5.51 | 69,9 | 145 | 16 | 26 | Pl | |||||
| HSPA2 | Heat shock 70 kDa protein | P08106 | 5.52 | 69,8 | 137 | 4 | 9 | Cs | |||||
| ALB | Serum albumin | 439 | P19121 | 5.51 | 69,9 | 88 | 12 | Pl | 1.00±0.11b | 1.04±0.07ab | 1.38±0.14a | 0.035 | |
| PCK2 | Phosphoenolpyruvate carboxykinase2 | 232 | P21642 | 7.56 | 71,1 | 364 | 10 | 16 | Mt | 1.00±0.05b | 1.12±0.04ab | 1.28±0.09a | 0.021 |
| LMNA | Lamin-A | P13648 | 6.50 | 73,2 | 113 | 2 | 3 | Mt, Nu | |||||
| ENO1 | Alpha-enolase§ | P51913 | 6.17 | 47,3 | 112 | 3 | 10 | Cp | |||||
| TUFM | Elongation factor Tu | P84172 | 8.98 | 38,3 | 52 | 1 | 3 | Mt | |||||
| MDH1 | Malate dehydrogenase 1 | Q5ZME2 | 6.92 | 36,5 | 36 | 1 | 3 | Cp | |||||
| ACO2 | Aconitate hydratase§ | 274 | Q8AYI3 | 8.04 | 85,8 | 261 | 6 | 9 | Mt | 1.00±0.03b | 1.01±0.02b | 1.12±0.04a | 0.010 |
| DLD | Dihydrolipoyl dehydrogenase§ | Q5ZM32 | 8.19 | 54.0 | 138 | 6 | 14 | Mt | |||||
| GLUD1 | Glutamate dehydrogenase 1 | P00368 | 8.48 | 55,7 | 65 | 4 | 12 | Mt | |||||
| ALB | Serum albumin§ | P19121 | 5.51 | 69,9 | 69 | 1 | 3 | Pl | |||||
| PCK2 | Phosphoenolpyruvate carboxykinase | P21642 | 7.56 | 71,1 | 59 | 1 | 2 | Mt | |||||
| CTH | Cystathionine gamma-lyase§ | E1BYF1 | 6.85 | 43,9 | 51 | 1 | 3 | Cp | |||||
| GLUT1 | Solute carrier family 2, facilitated glucose transporter member 1 | P46896 | 8.82 | 54,1 | 42 | 2 | 1 | Cm | |||||
| SMAD3 | Mothers against decapentaplegic homolog 3 | P84023 | 6.70 | 48,3 | 37 | 1 | 3 | Cp, Nu | |||||
| LDHB | L-lactate dehydrogenase B chain | P00337 | 7.07 | 36,3 | 36 | 1 | 3 | Cp | |||||
|
| |||||||||||||
| RPLP0 | 60S acidic ribosomal protein P0§ | 1033 | P47826 | 5.71 | 34,3 | 42 | 1 | 3 | Rb | 1.00±0.07ab | 1.04±0.09a | 0.78±0.07b | 0.050 |
| FBP1 | Fructose-1,6-bisphosphatase 1§ | 1045 | Q9I8D4 | 5.22 | 18,2 | 81 | 3 | 7 | Cp | 1.00±0.10a | 0.89±0.08ab | 0.63±0.12b | 0.036 |
| HIBADH | 3-hydroxyisobutyrate dehydrogenase § | 1126 | Q5ZLI9 | 8.60 | 35,3 | 421 | 10 | 16 | Mt | 1.00±0.10a | 0.99±0.06a | 0.58±0.14b | 0.011 |
| TST | Thiosulfate sulfurtransferase | 1135 | P25324 | 6.56 | 32,3 | 92 | 7 | 15 | Mt | 1.00±0.20a | 1.16±0.16a | 0.42±0.16b | 0.007 |
The spot number (Spot), Uniprot accession number (Uniprot ID), theoretical iso-electric point (pI), theoretical molecular weight (Mass), Mascot score, number of matched peptides (Queries) and sequence coverage (Coverage) are shown. The cellular localization (Location) is also indicated: Cm = cell membrane, Cp = cytoplasm, Cs = cell surface, Mt = mitochondria, Nu = nucleus, Pl = plasma and Rb = Ribosome. The mean fluorescence (Cy3 or Cy5) of the different spots normalized according to the fluorescence signal of the pooled sample (Cy2) ± SEM are shown in the table for the control, sham and albumen-deprived chicks. a–b Within a row, treatment means with different superscript are significantly different (P<0.05). P-values of effect of treatment are added in a separate column. Most of the identified spots contained just one protein, but several enclosed multiple proteins. On the other hand, some proteins were present in more than one spot. Porcine trypsine was added for fragmentation before LC-MS/MS and this was consequently identified in the samples but this was omitted for clarity. §Homologous protein was identified in different species, but results are always displayed for the chicken (Gallus gallus).
Identification of relevant canonical pathways affected by albumen removal by grouping of the differential expressed proteins through the use of Ingenuity Pathway Analysis (IPA).
| Molecules | B-H P-value | Ratio | |
| Ingenuity canonical pathways | |||
| TCA cycle II | ACO2, DLD, MDH1 | 3.55E-04 | 3/41 |
| Gluconeogenesis I | ENO1, FBP1, MDH1 | 3.55E-04 | 3/48 |
| Glucocorticoid receptor signaling | PCK2, SMAD3, HSPA9, HSPA2 | 2.57E-03 | 4/299 |
| Valine Degradation I | HIBADH, DLD | 8.13E-03 | 2/35 |
| Glycolysis I | ENO1, FBP1 | 8.51E-03 | 2/41 |
| Superpathway of Methionine Degradation | DLD, CTH | 1.82E-02 | 2/64 |
| TR/RXR Activation | ENO1, GLUT1 | 2.88E-02 | 2/109 |
| FXR/RXR Activation | PCK2, FBP1 | 2.88E-02 | 2/110 |
| L-cysteine degradation II | CTH | 2.88E-02 | 1/5 |
| Glutamate Biosynthesis/Degradation X | GLUD1 | 2.95E-02 | 1/7 |
| Pyruvate Fermentation to Lactate | LDHB | 2.95E-02 | 1/9 |
IPA-analysis (www.ingenuity.com) was used to identify key biological pathways comprising the differentially identified proteins after prenatal protein undernutrition by albumen removal in chicken. The significance of the canonical pathways was tested by the stringent Benjamini-Hochberg (B-H) multiple testing correction method. The ratio indicates the number of differential proteins in a given pathway divided by the total number of molecules that make up that pathway. The following proteins, annotated with their gene names, are included in the canonical pathways. Abbreviations: ACO2 (Aconitate hydratase); CTH (Cystathionine gamma-lyase); DLD (Dihydrolipoyl dehydrogenase); ENO1 (Alpha-enolase); FBP1 (Fructose-1,6-bisphosphatase 1); GLUD1 (Glutamate dehydrogenase 1); GLUT1 (Solute carrier family 2, facilitated glucose transporter member 1); HIBADH (3-hydroxyisobutyrate dehydrogenase); HSPA2 (Heat shock 70 kDa protein); HSPA9 (Stress-70 protein, mitochondrial precursor); LDHB (L-lactate dehydrogenase B chain); MDH1 (Malate dehydrogenase); PCK2 (Phosphoenolpyruvate carboxykinase); SMAD3 (Mothers against decapentaplegic homolog 3).
Gene expression of PCK1, PCK2, HIBADH and FBP1 normalized to the geometric average of expression of ACTB and PPID of the control, sham and the albumen-deprived chicks (n = 8) in the liver of newly-hatched chicks.
| control | sham | albumen-deprived | P-valuetreatment | ||||
| Mean | SEM | Mean | SEM | Mean | SEM | ||
| HIBADH | 1.00 | 0.10 | 0.95 | 0.06 | 0.87 | 0.05 | NS |
| PCK1 | 1.00 | 0.50 | 0.79 | 0.26 | 1.08 | 0.44 | NS |
| PCK2 | 1.00 | 0.05 | 0.96 | 0.08 | 0.94 | 0.07 | NS |
| FBP1 | 1.00 | 0.04 | 0.97 | 0.06 | 0.85 | 0.04 | 0.094 |
Data are shown as mean ± SEM.