Literature DB >> 24735678

Increasing phytoremediation efficiency and reliability using novel omics approaches.

Terrence H Bell1, Simon Joly1, Frédéric E Pitre1, Etienne Yergeau2.   

Abstract

Phytoremediation is a cost-effective green alternative to traditional soil remediation technologies, but has experienced varied success in practice. The recent omics revolution has led to leaps in our understanding of soil microbial communities and plant metabolism, and some of the conditions that promote predictable activity in contaminated soils and heterogeneous environments. Combinations of omics tools and new bioinformatics approaches will allow us to understand integrated activity patterns between plants and microbes, and determine how this metaorganism can be modified to maximize growth, appropriate assembly of microbial communities, and, ultimately, phytoremediation activity. Here we provide an overview of how new omics-mediated discoveries can potentially be translated into an effective and reliable environmental technology.
Copyright © 2014 Etienne Yergeau. Published by Elsevier Ltd.. All rights reserved.

Keywords:  bioremediation; metagenomics; metaorganism; metatranscriptomics; next-generation sequencing; phytoremediation

Mesh:

Substances:

Year:  2014        PMID: 24735678     DOI: 10.1016/j.tibtech.2014.02.008

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  25 in total

1.  Analysis of a large dataset of mycorrhiza inoculation field trials on potato shows highly significant increases in yield.

Authors:  Mohamed Hijri
Journal:  Mycorrhiza       Date:  2015-09-24       Impact factor: 3.387

2.  Comparative Transcriptomic Approaches Exploring Contamination Stress Tolerance in Salix sp. Reveal the Importance for a Metaorganismal de Novo Assembly Approach for Nonmodel Plants.

Authors:  Nicholas J B Brereton; Emmanuel Gonzalez; Julie Marleau; Werther Guidi Nissim; Michel Labrecque; Simon Joly; Frederic E Pitre
Journal:  Plant Physiol       Date:  2016-05       Impact factor: 8.340

3.  Phytoremediation of cadmium-contaminated wetland soil with Typha latifolia L. and the underlying mechanisms involved in the heavy-metal uptake and removal.

Authors:  Yan Yang; Qianyong Shen
Journal:  Environ Sci Pollut Res Int       Date:  2019-12-16       Impact factor: 4.223

4.  Core Concept: Phytoremediation advances in the lab but lags in the field.

Authors:  Carolyn Beans
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-18       Impact factor: 11.205

5.  Soil contamination alters the willow root and rhizosphere metatranscriptome and the root-rhizosphere interactome.

Authors:  Etienne Yergeau; Julien Tremblay; Simon Joly; Michel Labrecque; Christine Maynard; Frederic E Pitre; Marc St-Arnaud; Charles W Greer
Journal:  ISME J       Date:  2018-01-12       Impact factor: 10.302

6.  Soil Characteristics Constrain the Response of Microbial Communities and Associated Hydrocarbon Degradation Genes during Phytoremediation.

Authors:  Sara Correa-García; Karelle Rheault; Julien Tremblay; Armand Séguin; Etienne Yergeau
Journal:  Appl Environ Microbiol       Date:  2021-01-04       Impact factor: 4.792

7.  Culture-Dependent and -Independent Methods Capture Different Microbial Community Fractions in Hydrocarbon-Contaminated Soils.

Authors:  Franck O P Stefani; Terrence H Bell; Charlotte Marchand; Ivan E de la Providencia; Abdel El Yassimi; Marc St-Arnaud; Mohamed Hijri
Journal:  PLoS One       Date:  2015-06-08       Impact factor: 3.240

Review 8.  Harnessing phytomicrobiome signaling for rhizosphere microbiome engineering.

Authors:  Liliana Quiza; Marc St-Arnaud; Etienne Yergeau
Journal:  Front Plant Sci       Date:  2015-07-14       Impact factor: 5.753

Review 9.  Inter-organismal signaling and management of the phytomicrobiome.

Authors:  Donald L Smith; Dana Praslickova; Gayathri Ilangumaran
Journal:  Front Plant Sci       Date:  2015-09-14       Impact factor: 5.753

10.  Transplanting Soil Microbiomes Leads to Lasting Effects on Willow Growth, but not on the Rhizosphere Microbiome.

Authors:  Etienne Yergeau; Terrence H Bell; Julie Champagne; Christine Maynard; Stacie Tardif; Julien Tremblay; Charles W Greer
Journal:  Front Microbiol       Date:  2015-12-21       Impact factor: 5.640

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