Literature DB >> 24731855

Riboswitches in regulation of Rho-dependent transcription termination.

Sergey Proshkin1, Alexander Mironov1, Evgeny Nudler2.   

Abstract

Riboswitches are RNA sensors of small metabolites and ions that regulate gene expression in response to environmental changes. In bacteria, the riboswitch sensor domain usually controls the formation of a strong RNA hairpin that either functions as a potent transcription terminator or sequesters a ribosome-binding site. A recent study demonstrated a novel mechanism by which a riboswitch controls Rho-dependent transcription termination. This riboswitch mechanism is likely a widespread mode of gene regulation that determines whether a protein effector is able to attenuate transcription. This article is part of a Special Issue entitled: Riboswitches.
Copyright © 2014 Elsevier B.V. All rights reserved.

Keywords:  Rho; Riboswitch; Transcription termination

Year:  2014        PMID: 24731855     DOI: 10.1016/j.bbagrm.2014.04.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  LoaP is a broadly conserved antiterminator protein that regulates antibiotic gene clusters in Bacillus amyloliquefaciens.

Authors:  Jonathan R Goodson; Steven Klupt; Chengxi Zhang; Paul Straight; Wade C Winkler
Journal:  Nat Microbiol       Date:  2017-02-13       Impact factor: 17.745

Review 2.  Processive Antitermination.

Authors:  Jonathan R Goodson; Wade C Winkler
Journal:  Microbiol Spectr       Date:  2018-09

3.  Riboswitch-inspired toehold riboregulators for gene regulation in Escherichia coli.

Authors:  Tianhe Wang; Friedrich C Simmel
Journal:  Nucleic Acids Res       Date:  2022-04-21       Impact factor: 19.160

4.  sRNA-Mediated Control of Transcription Termination in E. coli.

Authors:  Nadezda Sedlyarova; Ilya Shamovsky; Binod K Bharati; Vitaly Epshtein; Jiandong Chen; Susan Gottesman; Renée Schroeder; Evgeny Nudler
Journal:  Cell       Date:  2016-09-22       Impact factor: 41.582

5.  Mapping the Complex Transcriptional Landscape of the Phytopathogenic Bacterium Dickeya dadantii.

Authors:  Raphaël Forquet; Xuejiao Jiang; William Nasser; Florence Hommais; Sylvie Reverchon; Sam Meyer
Journal:  mBio       Date:  2022-05-02       Impact factor: 7.786

Review 6.  Regulation of Transcription Termination of Small RNAs and by Small RNAs: Molecular Mechanisms and Biological Functions.

Authors:  Jiandong Chen; Teppei Morita; Susan Gottesman
Journal:  Front Cell Infect Microbiol       Date:  2019-06-12       Impact factor: 5.293

7.  Identification and characterisation of thiamine pyrophosphate (TPP) riboswitch in Elaeis guineensis.

Authors:  Atiqah Subki; Chai Ling Ho; Nur Farhah Nabihan Ismail; Aisamuddin Ardi Zainal Abidin; Zetty Norhana Balia Yusof
Journal:  PLoS One       Date:  2020-07-29       Impact factor: 3.240

8.  Requirements for efficient ligand-gated co-transcriptional switching in designed variants of the B. subtilis pbuE adenine-responsive riboswitch in E. coli.

Authors:  Lea K Drogalis; Robert T Batey
Journal:  PLoS One       Date:  2020-12-01       Impact factor: 3.240

9.  Genome-wide relationship between R-loop formation and antisense transcription in Escherichia coli.

Authors:  Nalini Raghunathan; Rajvardhan M Kapshikar; Jakku K Leela; Jillella Mallikarjun; Philippe Bouloc; Jayaraman Gowrishankar
Journal:  Nucleic Acids Res       Date:  2018-04-20       Impact factor: 16.971

  9 in total

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