Literature DB >> 24731338

High resolution melting (HRM) analysis of DNA--its role and potential in food analysis.

Barbara Druml1, Margit Cichna-Markl2.   

Abstract

DNA based methods play an increasing role in food safety control and food adulteration detection. Recent papers show that high resolution melting (HRM) analysis is an interesting approach. It involves amplification of the target of interest in the presence of a saturation dye by the polymerase chain reaction (PCR) and subsequent melting of the amplicons by gradually increasing the temperature. Since the melting profile depends on the GC content, length, sequence and strand complementarity of the product, HRM analysis is highly suitable for the detection of single-base variants and small insertions or deletions. The review gives an introduction into HRM analysis, covers important aspects in the development of an HRM analysis method and describes how HRM data are analysed and interpreted. Then we discuss the potential of HRM analysis based methods in food analysis, i.e. for the identification of closely related species and cultivars and the identification of pathogenic microorganisms.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Keywords:  Adulteration; Food; Genetically modified organisms (GMO); High resolution melting (HRM); Pathogenic microorganisms; Species identification

Mesh:

Substances:

Year:  2014        PMID: 24731338     DOI: 10.1016/j.foodchem.2014.02.111

Source DB:  PubMed          Journal:  Food Chem        ISSN: 0308-8146            Impact factor:   7.514


  26 in total

1.  Application of high-resolution melting analysis for differentiation of spoilage yeasts.

Authors:  Mine Erdem; Zülal Kesmen; Esra Özbekar; Bülent Çetin; Hasan Yetim
Journal:  J Microbiol       Date:  2016-08-31       Impact factor: 3.422

2.  Screening of the BRCA1 gene in Brazilian patients with breast and/or ovarian cancer via high-resolution melting reaction analysis.

Authors:  Eneida Santos de Oliveira; Bárbara Luisa Soares; Sara Lemos; Reginaldo Cruz Alves Rosa; Angélica Nogueira Rodrigues; Leandro Augusto Barbosa; Débora de Oliveira Lopes; Luciana Lara dos Santos
Journal:  Fam Cancer       Date:  2016-04       Impact factor: 2.375

3.  An integrated system for identifying the hidden assassins in traditional medicines containing aristolochic acids.

Authors:  Lan Wu; Wei Sun; Bo Wang; Haiyu Zhao; Yaoli Li; Shaoqing Cai; Li Xiang; Yingjie Zhu; Hui Yao; Jingyuan Song; Yung-Chi Cheng; Shilin Chen
Journal:  Sci Rep       Date:  2015-08-13       Impact factor: 4.379

4.  Mutation scanning in a single and a stacked genetically modified (GM) event by real-time PCR and high resolution melting (HRM) analysis.

Authors:  Sina-Elisabeth Ben Ali; Zita Erika Madi; Rupert Hochegger; David Quist; Bernhard Prewein; Alexander G Haslberger; Christian Brandes
Journal:  Int J Mol Sci       Date:  2014-10-31       Impact factor: 5.923

5.  Molecular Identification of Broomrape Species from a Single Seed by High Resolution Melting Analysis.

Authors:  Mathieu Rolland; Aurélie Dupuy; Aude Pelleray; Philippe Delavault
Journal:  Front Plant Sci       Date:  2016-12-12       Impact factor: 5.753

6.  High Resolution Melting (HRM) for High-Throughput Genotyping-Limitations and Caveats in Practical Case Studies.

Authors:  Marcin Słomka; Marta Sobalska-Kwapis; Monika Wachulec; Grzegorz Bartosz; Dominik Strapagiel
Journal:  Int J Mol Sci       Date:  2017-11-03       Impact factor: 5.923

7.  Identification and quantification of virulence factors of enterotoxigenic Escherichia coli by high-resolution melting curve quantitative PCR.

Authors:  Weilan Wang; Ruurd T Zijlstra; Michael G Gänzle
Journal:  BMC Microbiol       Date:  2017-05-15       Impact factor: 3.605

8.  Improved protocol for rapid identification of certain spa types using high resolution melting curve analysis.

Authors:  Benjamin Mayerhofer; Anna Stöger; Ariane T Pietzka; Haizpea Lasa Fernandez; Bernhard Prewein; Sieglinde Sorschag; Renate Kunert; Franz Allerberger; Werner Ruppitsch
Journal:  PLoS One       Date:  2015-03-13       Impact factor: 3.240

9.  High-resolution melting of 12S rRNA and cytochrome b DNA sequences for discrimination of species within distinct European animal families.

Authors:  Jana Naue; Tobias Hansmann; Ulrike Schmidt
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

10.  Alternative SNP detection platforms, HRM and biosensors, for varietal identification in Vitis vinifera L. using F3H and LDOX genes.

Authors:  Sónia Gomes; Cláudia Castro; Sara Barrias; Leonor Pereira; Pedro Jorge; José R Fernandes; Paula Martins-Lopes
Journal:  Sci Rep       Date:  2018-04-11       Impact factor: 4.379

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