Literature DB >> 24730783

Quantifying the effects of neglecting many-body interactions in coarse-grained models of complex fluids.

Douglas J Ashton1, Nigel B Wilding1.   

Abstract

We describe a general simulation scheme for assessing the thermodynamic consequences of neglecting many-body effects in coarse-grained models of complex fluids. The method exploits the fact that the asymptote of a simple-to-measure structural function provides direct estimates of virial coefficients. Comparing the virial coefficients of an atomistically detailed system with those of a coarse-grained version described by pair potentials, permits the role of many-body effects to be quantified. The approach is applied to two models: (i) a size-asymmetrical colloid-polymer mixture, and (ii) a solution of star polymers. In the latter case, coarse-graining to an effective fluid described by pair potentials is found to neglect important aspects of the true behavior.

Entities:  

Year:  2014        PMID: 24730783     DOI: 10.1103/PhysRevE.89.031301

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Simulating the entropic collapse of coarse-grained chromosomes.

Authors:  Tyler N Shendruk; Martin Bertrand; Hendrick W de Haan; James L Harden; Gary W Slater
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

2.  Quantifying Protein-Protein Interactions in Molecular Simulations.

Authors:  Alfredo Jost Lopez; Patrick K Quoika; Max Linke; Gerhard Hummer; Jürgen Köfinger
Journal:  J Phys Chem B       Date:  2020-06-02       Impact factor: 2.991

  2 in total

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