Literature DB >> 24727776

E. coli network upgrade.

Ulrich Stelzl1.   

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Year:  2014        PMID： 24727776     DOI： 10.1038/nbt.2848

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  12 in total

1.  Proteome organization in a genome-reduced bacterium.

Authors:  Sebastian Kühner; Vera van Noort; Matthew J Betts; Alejandra Leo-Macias; Claire Batisse; Michaela Rode; Takuji Yamada; Tobias Maier; Samuel Bader; Pedro Beltran-Alvarez; Daniel Castaño-Diez; Wei-Hua Chen; Damien Devos; Marc Güell; Tomas Norambuena; Ines Racke; Vladimir Rybin; Alexander Schmidt; Eva Yus; Ruedi Aebersold; Richard Herrmann; Bettina Böttcher; Achilleas S Frangakis; Robert B Russell; Luis Serrano; Peer Bork; Anne-Claude Gavin
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

2.  A Y2H-seq approach defines the human protein methyltransferase interactome.

Authors:  Mareike Weimann; Arndt Grossmann; Jonathan Woodsmith; Ziya Özkan; Petra Birth; David Meierhofer; Nouhad Benlasfer; Taras Valovka; Bernd Timmermann; Erich E Wanker; Sascha Sauer; Ulrich Stelzl
Journal:  Nat Methods       Date:  2013-03-03       Impact factor: 28.547

3.  Interactome3D: adding structural details to protein networks.

Authors:  Roberto Mosca; Arnaud Céol; Patrick Aloy
Journal:  Nat Methods       Date:  2012-12-16       Impact factor: 28.547

4.  The protein-protein interaction map of Helicobacter pylori.

Authors:  J C Rain; L Selig; H De Reuse; V Battaglia; C Reverdy; S Simon; G Lenzen; F Petel; J Wojcik; V Schächter; Y Chemama; A Labigne; P Legrain
Journal:  Nature       Date:  2001-01-11       Impact factor: 49.962

5.  A census of human soluble protein complexes.

Authors:  Pierre C Havugimana; G Traver Hart; Tamás Nepusz; Haixuan Yang; Andrei L Turinsky; Zhihua Li; Peggy I Wang; Daniel R Boutz; Vincent Fong; Sadhna Phanse; Mohan Babu; Stephanie A Craig; Pingzhao Hu; Cuihong Wan; James Vlasblom; Vaqaar-un-Nisa Dar; Alexandr Bezginov; Gregory W Clark; Gabriel C Wu; Shoshana J Wodak; Elisabeth R M Tillier; Alberto Paccanaro; Edward M Marcotte; Andrew Emili
Journal:  Cell       Date:  2012-08-31       Impact factor: 41.582

6.  Large-scale identification of protein-protein interaction of Escherichia coli K-12.

Authors:  Mohammad Arifuzzaman; Maki Maeda; Aya Itoh; Kensaku Nishikata; Chiharu Takita; Rintaro Saito; Takeshi Ara; Kenji Nakahigashi; Hsuan-Cheng Huang; Aki Hirai; Kohei Tsuzuki; Seira Nakamura; Mohammad Altaf-Ul-Amin; Taku Oshima; Tomoya Baba; Natsuko Yamamoto; Tomoyo Kawamura; Tomoko Ioka-Nakamichi; Masanari Kitagawa; Masaru Tomita; Shigehiko Kanaya; Chieko Wada; Hirotada Mori
Journal:  Genome Res       Date:  2006-04-10       Impact factor: 9.043

7.  RsfA (YbeB) proteins are conserved ribosomal silencing factors.

Authors:  Roman Häuser; Markus Pech; Jaroslaw Kijek; Hiroshi Yamamoto; Björn Titz; Florian Naeve; Andrey Tovchigrechko; Kaori Yamamoto; Witold Szaflarski; Nono Takeuchi; Thorsten Stellberger; Markus E Diefenbacher; Knud H Nierhaus; Peter Uetz
Journal:  PLoS Genet       Date:  2012-07-19       Impact factor: 5.917

8.  The binary protein-protein interaction landscape of Escherichia coli.

Authors:  Patricia Sikorski; Ashwani Kumar; Roberto Mosca; Seesandra V Rajagopala; James Vlasblom; Roland Arnold; Jonathan Franca-Koh; Suman B Pakala; Sadhna Phanse; Arnaud Ceol; Roman Häuser; Gabriella Siszler; Stefan Wuchty; Andrew Emili; Mohan Babu; Patrick Aloy; Rembert Pieper; Peter Uetz
Journal:  Nat Biotechnol       Date:  2014-02-23       Impact factor: 54.908

9.  An empirical framework for binary interactome mapping.

Authors:  Kavitha Venkatesan; Jean-François Rual; Alexei Vazquez; Ulrich Stelzl; Irma Lemmens; Tomoko Hirozane-Kishikawa; Tong Hao; Martina Zenkner; Xiaofeng Xin; Kwang-Il Goh; Muhammed A Yildirim; Nicolas Simonis; Kathrin Heinzmann; Fana Gebreab; Julie M Sahalie; Sebiha Cevik; Christophe Simon; Anne-Sophie de Smet; Elizabeth Dann; Alex Smolyar; Arunachalam Vinayagam; Haiyuan Yu; David Szeto; Heather Borick; Amélie Dricot; Niels Klitgord; Ryan R Murray; Chenwei Lin; Maciej Lalowski; Jan Timm; Kirstin Rau; Charles Boone; Pascal Braun; Michael E Cusick; Frederick P Roth; David E Hill; Jan Tavernier; Erich E Wanker; Albert-László Barabási; Marc Vidal
Journal:  Nat Methods       Date:  2008-12-07       Impact factor: 28.547

10.  A proteome-wide protein interaction map for Campylobacter jejuni.

Authors:  Jodi R Parrish; Jingkai Yu; Guozhen Liu; Julie A Hines; Jason E Chan; Bernie A Mangiola; Huamei Zhang; Svetlana Pacifico; Farshad Fotouhi; Victor J DiRita; Trey Ideker; Phillip Andrews; Russell L Finley
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583
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  2 in total

1.  Multiple protein-protein interactions converging on the Prp38 protein during activation of the human spliceosome.

Authors:  Tonio Schütze; Alexander K C Ulrich; Luise Apelt; Cindy L Will; Natascha Bartlick; Martin Seeger; Gert Weber; Reinhard Lührmann; Ulrich Stelzl; Markus C Wahl
Journal:  RNA       Date:  2015-12-16       Impact factor: 4.942

2.  A Protein Complex Map of Trypanosoma brucei.

Authors:  Vahid H Gazestani; Najmeh Nikpour; Vaibhav Mehta; Hamed S Najafabadi; Houtan Moshiri; Armando Jardim; Reza Salavati
Journal:  PLoS Negl Trop Dis       Date:  2016-03-18
  2 in total

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