Literature DB >> 24727133

A method for 3D-reconstruction of a muscle thick filament using the tilt series images of a single filament electron tomogram.

G Márquez1, A Pinto2, L Alamo3, B Baumann4, F Ye5, H Winkler6, K Taylor7, R Padrón8.   

Abstract

Myosin interacting-heads (MIH) motifs are visualized in 3D-reconstructions of thick filaments from striated muscle. These reconstructions are calculated by averaging methods using images from electron micrographs of grids prepared using numerous filament preparations. Here we propose an alternative method to calculate the 3D-reconstruction of a single thick filament using only a tilt series images recorded by electron tomography. Relaxed thick filaments, prepared from tarantula leg muscle homogenates, were negatively stained. Single-axis tilt series of single isolated thick filaments were obtained with the electron microscope at a low electron dose, and recorded on a CCD camera by electron tomography. An IHRSR 3D-recontruction was calculated from the tilt series images of a single thick filament. The reconstruction was enhanced by including in the search stage dual tilt image segments while only single tilt along the filament axis is usually used, as well as applying a band pass filter just before the back projection. The reconstruction from a single filament has a 40 Å resolution and clearly shows the presence of MIH motifs. In contrast, the electron tomogram 3D-reconstruction of the same thick filament - calculated without any image averaging and/or imposition of helical symmetry - only reveals MIH motifs infrequently. This is - to our knowledge - the first application of the IHRSR method to calculate a 3D reconstruction from tilt series images. This single filament IHRSR reconstruction method (SF-IHRSR) should provide a new tool to assess structural differences between well-ordered thick (or thin) filaments in a grid by recording separately their electron tomograms.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  3D-reconstruction; Electron microscopy; Electron tomography; Muscle thick filament; Myosin interacting-heads (MIH) motif; Negative staining

Mesh:

Substances:

Year:  2014        PMID: 24727133      PMCID: PMC4102135          DOI: 10.1016/j.jsb.2014.04.003

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  31 in total

1.  Three-dimensional image reconstruction of dephosphorylated smooth muscle heavy meromyosin reveals asymmetry in the interaction between myosin heads and placement of subfragment 2.

Authors:  T Wendt; D Taylor; K M Trybus; K Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-03       Impact factor: 11.205

2.  Purification of native myosin filaments from muscle.

Authors:  C Hidalgo; R Padrón; R Horowitz; F Q Zhao; R Craig
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

3.  Issues of resolution and polymorphism in single-particle reconstruction.

Authors:  Shixin Yang; Xiong Yu; Vitold E Galkin; Edward H Egelman
Journal:  J Struct Biol       Date:  2003 Oct-Nov       Impact factor: 2.867

4.  Capturing time-resolved changes in molecular structure by negative staining.

Authors:  Fa-Qing Zhao; Roger Craig
Journal:  J Struct Biol       Date:  2003-01       Impact factor: 2.867

5.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

6.  Different head environments in tarantula thick filaments support a cooperative activation process.

Authors:  Guidenn Sulbarán; Antonio Biasutto; Lorenzo Alamo; Claire Riggs; Antonio Pinto; Franklin Méndez; Roger Craig; Raúl Padrón
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

Review 7.  The mechanism of muscular contraction.

Authors:  H E Huxley
Journal:  Science       Date:  1969-06-20       Impact factor: 47.728

8.  The low-angle x-ray diagram of vertebrate striated muscle and its behaviour during contraction and rigor.

Authors:  H E Huxley; W Brown
Journal:  J Mol Biol       Date:  1967-12-14       Impact factor: 5.469

9.  Refined model of the 10S conformation of smooth muscle myosin by cryo-electron microscopy 3D image reconstruction.

Authors:  Jun Liu; Thomas Wendt; Dianne Taylor; Kenneth Taylor
Journal:  J Mol Biol       Date:  2003-06-20       Impact factor: 5.469

10.  Visualization of head-head interactions in the inhibited state of smooth muscle myosin.

Authors:  T Wendt; D Taylor; T Messier; K M Trybus; K A Taylor
Journal:  J Cell Biol       Date:  1999-12-27       Impact factor: 10.539

View more
  1 in total

Review 1.  Lessons from a tarantula: new insights into muscle thick filament and myosin interacting-heads motif structure and function.

Authors:  Lorenzo Alamo; Natalia Koubassova; Antonio Pinto; Richard Gillilan; Andrey Tsaturyan; Raúl Padrón
Journal:  Biophys Rev       Date:  2017-09-04
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.