Literature DB >> 24720358

Mutations in exons 10 and 11 of human glucokinase result in conformational variations in the active site of the structure contributing to poor substrate binding - explains hyperglycemia in type 2 diabetic patients.

Nandakumar Yellapu1, Manoj Kumar Mahto, Koteswara Rao Valasani, P V G K Sarma, Bhaskar Matcha.   

Abstract

Mutations in the glucokinase (GK) gene play a critical role in the establishment of type 2 diabetes. In our earlier study, R308K mutation in GK in a clinically proven type 2 diabetic patient showed, structural and functional variations that contributed immensely to the hyperglycemic condition. In the extension of this work, a cohort of 30 patients with established type 2 diabetic condition were chosen and the exons 10 and 11 of GK were PCR-amplified and sequenced. The sequence alignment showed A379S, D400Y, E300A, E395A, E395G, H380N, I348N, L301M, M298I, M381G, M402R, R308K, R394P, R397S, and S398R mutations in 12 different patients. The structural analysis of these mutated GKs, showed a variable number of β-α-β units, hairpins, β-bulges, strands, helices, helix-helix interactions, β-turns, and γ-turns along with the RMSD variations when compared to wild-type GK. Molecular modeling studies revealed that the substrate showed variable binding orientations and could not fit into the active site of these mutated structures; moreover, it was expelled out of the conformations. Therefore, these structural variations in GK due to mutations could be one of the strongest reasons for the hyperglycemic levels in these type 2 diabetic patients.

Entities:  

Keywords:  glucokinase; molecular docking; molecular dynamics; mutations

Mesh:

Substances:

Year:  2014        PMID: 24720358     DOI: 10.1080/07391102.2014.913989

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  2 in total

1.  Conformational transition pathway of R308K mutant glucokinase in the presence of the glucokinase activator YNKGKA4.

Authors:  Nanda Kumar Yellapu; Kalpana Kandlapalli; Ramesh Kandimalla; Pradeepkiran Jangampalli Adi
Journal:  FEBS Open Bio       Date:  2018-07-06       Impact factor: 2.693

2.  Three Novel Mutations I65S, R66S, and G86R Divulge Significant Conformational Variations in the PTB Domain of the IRS1 Gene.

Authors:  Praveen Chakravarthi Veeraragavulu; Nanda Kumar Yellapu; Sireesha Yerrathota; Pradeepkiran Jangampalli Adi; Bhaskar Matcha
Journal:  ACS Omega       Date:  2019-01-29
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.