Literature DB >> 24713703

Staphylococcal SplB serine protease utilizes a novel molecular mechanism of activation.

Katarzyna Pustelny1, Michal Zdzalik2, Natalia Stach2, Justyna Stec-Niemczyk3, Przemyslaw Cichon2, Anna Czarna4, Grzegorz Popowicz5, Pawel Mak6, Marcin Drag7, Guy S Salvesen8, Benedykt Wladyka6, Jan Potempa9, Adam Dubin3, Grzegorz Dubin10.   

Abstract

Staphylococcal SplB protease belongs to the chymotrypsin family. Chymotrypsin zymogen is activated by proteolytic processing at the N terminus, resulting in significant structural rearrangement at the active site. Here, we demonstrate that the molecular mechanism of SplB protease activation differs significantly and we characterize the novel mechanism in detail. Using peptide and protein substrates we show that the native signal peptide, or any N-terminal extension, has an inhibitory effect on SplB. Only precise N-terminal processing releases the full proteolytic activity of the wild type analogously to chymotrypsin. However, comparison of the crystal structures of mature SplB and a zymogen mimic show no rearrangement at the active site whatsoever. Instead, only the formation of a unique hydrogen bond network, distant form the active site, by the new N-terminal glutamic acid of mature SplB is observed. The importance of this network and influence of particular hydrogen bond interactions at the N terminus on the catalytic process is demonstrated by evaluating the kinetics of a series of mutants. The results allow us to propose a consistent model where changes in the overall protein dynamics rather than structural rearrangement of the active site are involved in the activation process.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Crystal Structure; Enzyme Inactivation; Protease; Serine Protease; Signal Peptide; Staphylococcus aureus; Zymogen Activation

Mesh:

Substances:

Year:  2014        PMID: 24713703      PMCID: PMC4140910          DOI: 10.1074/jbc.M113.507616

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  29 in total

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Review 2.  The role of pro regions in protein folding.

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3.  Bovine chymotrypsinogen A X-ray crystal structure analysis and refinement of a new crystal form at 1.8 A resolution.

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Journal:  J Mol Biol       Date:  1985-10-05       Impact factor: 5.469

4.  Role of metalloprotease in activation of the precursor of staphylococcal protease.

Authors:  G R Drapeau
Journal:  J Bacteriol       Date:  1978-11       Impact factor: 3.490

5.  Propeptide of carboxypeptidase Y provides a chaperone-like function as well as inhibition of the enzymatic activity.

Authors:  J R Winther; P Sørensen
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-15       Impact factor: 11.205

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Review 7.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 9.  Regulation of bacterial protease activity.

Authors:  Benedykt Władyka; Katarzyna Pustelny
Journal:  Cell Mol Biol Lett       Date:  2008-04-10       Impact factor: 5.787

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  8 in total

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