Literature DB >> 24706820

Fungal prion HET-s as a model for structural complexity and self-propagation in prions.

William Wan1, Gerald Stubbs.   

Abstract

The highly ordered and reproducible structure of the fungal prion HET-s makes it an excellent model system for studying the inherent properties of prions, self-propagating infectious proteins that have been implicated in a number of fatal diseases. In particular, the HET-s prion-forming domain readily folds into a relatively complex two-rung β-solenoid amyloid. The faithful self-propagation of this fold involves a diverse array of inter- and intramolecular structural features. These features include a long flexible loop connecting the two rungs, buried polar residues, salt bridges, and asparagine ladders. We have used site-directed mutagenesis and X-ray fiber diffraction to probe the relative importance of these features for the formation of β-solenoid structure, as well as the cumulative effects of multiple mutations. Using fibrillization kinetics and chemical stability assays, we have determined the biophysical effects of our mutations on the assembly and stability of the prion-forming domain. We have found that a diversity of structural features provides a level of redundancy that allows robust folding and stability even in the face of significant sequence alterations and suboptimal environmental conditions. Our findings provide fundamental insights into the structural interactions necessary for self-propagation. Propagation of prion structure seems to require an obligatory level of complexity that may not be reproducible in short peptide models.

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Year:  2014        PMID: 24706820      PMCID: PMC3986130          DOI: 10.1073/pnas.1322933111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Amyloid aggregates of the HET-s prion protein are infectious.

Authors:  Marie-Lise Maddelein; Suzana Dos Reis; Stéphane Duvezin-Caubet; Bénédicte Coulary-Salin; Sven J Saupe
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

2.  The common architecture of cross-beta amyloid.

Authors:  Thomas R Jahn; O Sumner Makin; Kyle L Morris; Karen E Marshall; Pei Tian; Pawel Sikorski; Louise C Serpell
Journal:  J Mol Biol       Date:  2009-09-23       Impact factor: 5.469

3.  Natural and synthetic prion structure from X-ray fiber diffraction.

Authors:  Holger Wille; Wen Bian; Michele McDonald; Amy Kendall; David W Colby; Lillian Bloch; Julian Ollesch; Alexander L Borovinskiy; Fred E Cohen; Stanley B Prusiner; Gerald Stubbs
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-28       Impact factor: 11.205

4.  Monte Carlo simulation of parameter confidence intervals for non-linear regression analysis of biological data using Microsoft Excel.

Authors:  Ronald J W Lambert; Ioannis Mytilinaios; Luke Maitland; Angus M Brown
Journal:  Comput Methods Programs Biomed       Date:  2011-07-18       Impact factor: 5.428

5.  X-ray diffraction studies on amyloid filaments.

Authors:  E D Eanes; G G Glenner
Journal:  J Histochem Cytochem       Date:  1968-11       Impact factor: 2.479

6.  Scrapie prions aggregate to form amyloid-like birefringent rods.

Authors:  S B Prusiner; M P McKinley; K A Bowman; D C Bolton; P E Bendheim; D F Groth; G G Glenner
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

Review 7.  Curli biogenesis and function.

Authors:  Michelle M Barnhart; Matthew R Chapman
Journal:  Annu Rev Microbiol       Date:  2006       Impact factor: 15.500

8.  Correlation of structural elements and infectivity of the HET-s prion.

Authors:  Christiane Ritter; Marie-Lise Maddelein; Ansgar B Siemer; Thorsten Lührs; Matthias Ernst; Beat H Meier; Sven J Saupe; Roland Riek
Journal:  Nature       Date:  2005-06-09       Impact factor: 49.962

9.  Amyloid fibers are water-filled nanotubes.

Authors:  M F Perutz; J T Finch; J Berriman; A Lesk
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

10.  Functional amyloids as natural storage of peptide hormones in pituitary secretory granules.

Authors:  Samir K Maji; Marilyn H Perrin; Michael R Sawaya; Sebastian Jessberger; Krishna Vadodaria; Robert A Rissman; Praful S Singru; K Peter R Nilsson; Rozalyn Simon; David Schubert; David Eisenberg; Jean Rivier; Paul Sawchenko; Wylie Vale; Roland Riek
Journal:  Science       Date:  2009-06-18       Impact factor: 47.728

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  16 in total

Review 1.  The HET-S/s Prion Motif in the Control of Programmed Cell Death.

Authors:  Roland Riek; Sven J Saupe
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-09-01       Impact factor: 10.005

2.  Structural and molecular basis of cross-seeding barriers in amyloids.

Authors:  Asen Daskalov; Denis Martinez; Virginie Coustou; Nadia El Mammeri; Mélanie Berbon; Loren B Andreas; Benjamin Bardiaux; Jan Stanek; Abdelmajid Noubhani; Brice Kauffmann; Joseph S Wall; Guido Pintacuda; Sven J Saupe; Birgit Habenstein; Antoine Loquet
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

3.  Amyloid cores in prion domains: Key regulators for prion conformational conversion.

Authors:  María Rosario Fernández; Cristina Batlle; Marcos Gil-García; Salvador Ventura
Journal:  Prion       Date:  2017-01-02       Impact factor: 3.931

4.  On the evolutionary trajectories of signal-transducing amyloids in fungi and beyond.

Authors:  Asen Daskalov
Journal:  Prion       Date:  2016-09-02       Impact factor: 3.931

5.  Protein folding, misfolding and aggregation: The importance of two-electron stabilizing interactions.

Authors:  Andrzej Stanisław Cieplak
Journal:  PLoS One       Date:  2017-09-18       Impact factor: 3.240

6.  A 31-residue peptide induces aggregation of tau's microtubule-binding region in cells.

Authors:  Jan Stöhr; Haifan Wu; Mimi Nick; Yibing Wu; Manasi Bhate; Carlo Condello; Noah Johnson; Jeffrey Rodgers; Thomas Lemmin; Srabasti Acharya; Julia Becker; Kathleen Robinson; Mark J S Kelly; Feng Gai; Gerald Stubbs; Stanley B Prusiner; William F DeGrado
Journal:  Nat Chem       Date:  2017-04-03       Impact factor: 24.427

7.  Toward a Soluble Model System for the Amyloid State.

Authors:  Nicole C Thomas; Gail J Bartlett; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2017-11-08       Impact factor: 15.419

8.  Truncated forms of the prion protein PrP demonstrate the need for complexity in prion structure.

Authors:  William Wan; Jan Stöhr; Amy Kendall; Gerald Stubbs
Journal:  Prion       Date:  2015-09-01       Impact factor: 3.931

Review 9.  A glass menagerie of low complexity sequences.

Authors:  Randal Halfmann
Journal:  Curr Opin Struct Biol       Date:  2016-05-31       Impact factor: 6.809

10.  Theme and variations: evolutionary diversification of the HET-s functional amyloid motif.

Authors:  Asen Daskalov; Witold Dyrka; Sven J Saupe
Journal:  Sci Rep       Date:  2015-07-29       Impact factor: 4.379

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