Literature DB >> 24706714

Recommended minimal standards for description of new taxa of the genera Bifidobacterium, Lactobacillus and related genera.

Paola Mattarelli1, Wilhelm Holzapfel2, Charles M A P Franz3, Akihito Endo4, Giovanna E Felis5, Walter Hammes6, Bruno Pot7, Leon Dicks8, Franco Dellaglio5.   

Abstract

Minimal standards for the description of new cultivable strains that represent novel genera and species belonging to the genera Bifidobacterium, Lactobacillus and related genera are proposed in accordance with Recommendation 30b of the Bacteriological Code (1990 Revision): the description of novel species should be based on phenotypic, genotypic and ecological characteristics to ensure a rich polyphasic characterization. Concerning genotypic characterization, in addition to DNA G+C content (mol%) data, the description should be based on DNA-DNA hybridization (DDH), 16S rRNA gene sequence similarities and at least two housekeeping gene (e.g. hsp60 and recA) sequence similarities. DDH might not be needed if the 16S rRNA gene sequence similarity to the closest known species is lower than 97 %. This proposal has been endorsed by members of the Subcommittee on the Taxonomy of Bifidobacterium, Lactobacillus and related organisms of the International Committee on the Systematics of Prokaryotes.

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Year:  2014        PMID: 24706714     DOI: 10.1099/ijs.0.060046-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  15 in total

1.  Glutamine synthetase type I (glnAI) represents a rewarding molecular marker in the classification of bifidobacteria and related genera.

Authors:  Jiří Killer; Chahrazed Mekadim; Věra Bunešová; Jakub Mrázek; Zuzana Hroncová; Eva Vlková
Journal:  Folia Microbiol (Praha)       Date:  2019-05-08       Impact factor: 2.099

2.  Aciduric Strains of Lactobacillus reuteri and Lactobacillus rhamnosus, Isolated from Human Feces, Have Strong Adhesion and Aggregation Properties.

Authors:  Kyle B Klopper; Shelly M Deane; Leon M T Dicks
Journal:  Probiotics Antimicrob Proteins       Date:  2018-03       Impact factor: 4.609

3.  Comparative Genomics of the Genus Lactobacillus Reveals Robust Phylogroups That Provide the Basis for Reclassification.

Authors:  Elisa Salvetti; Hugh M B Harris; Giovanna E Felis; Paul W O'Toole
Journal:  Appl Environ Microbiol       Date:  2018-08-17       Impact factor: 4.792

4.  Development of Bacterial Therapeutics against the Bovine Respiratory Pathogen Mannheimia haemolytica.

Authors:  Samat Amat; Edouard Timsit; Danica Baines; Jay Yanke; Trevor W Alexander
Journal:  Appl Environ Microbiol       Date:  2019-10-16       Impact factor: 4.792

Review 5.  Biodiversity of Intestinal Lactic Acid Bacteria in the Healthy Population.

Authors:  Marika Mikelsaar; Epp Sepp; Jelena Štšepetova; Epp Songisepp; Reet Mändar
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

6.  Challenging the anthropocentric emphasis on phenotypic testing in prokaryotic species descriptions: rip it up and start again.

Authors:  Iain C Sutcliffe
Journal:  Front Genet       Date:  2015-06-17       Impact factor: 4.599

7.  The domestication of the probiotic bacterium Lactobacillus acidophilus.

Authors:  Matthew J Bull; Keith A Jolley; James E Bray; Maarten Aerts; Peter Vandamme; Martin C J Maiden; Julian R Marchesi; Eshwar Mahenthiralingam
Journal:  Sci Rep       Date:  2014-11-26       Impact factor: 4.379

8.  DFAST and DAGA: web-based integrated genome annotation tools and resources.

Authors:  Yasuhiro Tanizawa; Takatomo Fujisawa; Eli Kaminuma; Yasukazu Nakamura; Masanori Arita
Journal:  Biosci Microbiota Food Health       Date:  2016-07-14

9.  Gene encoding the CTP synthetase as an appropriate molecular tool for identification and phylogenetic study of the family Bifidobacteriaceae.

Authors:  Jiří Killer; Chahrazed Mekadim; Radko Pechar; Věra Bunešová; Jakub Mrázek; Eva Vlková
Journal:  Microbiologyopen       Date:  2018-01-22       Impact factor: 3.139

10.  Phylogenomic Analyses and Comparative Studies on Genomes of the Bifidobacteriales: Identification of Molecular Signatures Specific for the Order Bifidobacteriales and Its Different Subclades.

Authors:  Grace Zhang; Beile Gao; Mobolaji Adeolu; Bijendra Khadka; Radhey S Gupta
Journal:  Front Microbiol       Date:  2016-06-27       Impact factor: 5.640

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