Literature DB >> 24704506

Large-scale identification and analysis of suppressive drug interactions.

Murat Cokol1, Zohar B Weinstein2, Kaan Yilancioglu2, Murat Tasan3, Allison Doak4, Dilay Cansever2, Beste Mutlu2, Siyang Li3, Raul Rodriguez-Esteban5, Murodzhon Akhmedov6, Aysegul Guvenek6, Melike Cokol6, Selim Cetiner6, Guri Giaever7, Ivan Iossifov8, Corey Nislow7, Brian Shoichet4, Frederick P Roth9.   

Abstract

One drug may suppress the effects of another. Although knowledge of drug suppression is vital to avoid efficacy-reducing drug interactions or discover countermeasures for chemical toxins, drug-drug suppression relationships have not been systematically mapped. Here, we analyze the growth response of Saccharomyces cerevisiae to anti-fungal compound ("drug") pairs. Among 440 ordered drug pairs, we identified 94 suppressive drug interactions. Using only pairs not selected on the basis of their suppression behavior, we provide an estimate of the prevalence of suppressive interactions between anti-fungal compounds as 17%. Analysis of the drug suppression network suggested that Bromopyruvate is a frequently suppressive drug and Staurosporine is a frequently suppressed drug. We investigated potential explanations for suppressive drug interactions, including chemogenomic analysis, coaggregation, and pH effects, allowing us to explain the interaction tendencies of Bromopyruvate.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24704506      PMCID: PMC4281482          DOI: 10.1016/j.chembiol.2014.02.012

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  52 in total

1.  Chemical probes of Escherichia coli uncovered through chemical-chemical interaction profiling with compounds of known biological activity.

Authors:  Maya A Farha; Eric D Brown
Journal:  Chem Biol       Date:  2010-08-27

2.  The chemical genomic portrait of yeast: uncovering a phenotype for all genes.

Authors:  Maureen E Hillenmeyer; Eula Fung; Jan Wildenhain; Sarah E Pierce; Shawn Hoon; William Lee; Michael Proctor; Robert P St Onge; Mike Tyers; Daphne Koller; Russ B Altman; Ronald W Davis; Corey Nislow; Guri Giaever
Journal:  Science       Date:  2008-04-18       Impact factor: 47.728

3.  Characterization of staurosporine-sensitive mutants of Saccharomyces cerevisiae: vacuolar functions affect staurosporine sensitivity.

Authors:  S Yoshida; Y Anraku
Journal:  Mol Gen Genet       Date:  2000-06

4.  Mechanisms of action of the antimycotic imidazoles.

Authors:  I J Sud; D S Feingold
Journal:  J Invest Dermatol       Date:  1981-06       Impact factor: 8.551

5.  Purification and characterization of a methionine aminopeptidase from Saccharomyces cerevisiae.

Authors:  Y H Chang; U Teichert; J A Smith
Journal:  J Biol Chem       Date:  1990-11-15       Impact factor: 5.157

Review 6.  3-bromopyruvate: a new targeted antiglycolytic agent and a promise for cancer therapy.

Authors:  S Ganapathy-Kanniappan; M Vali; R Kunjithapatham; M Buijs; L H Syed; P P Rao; S Ota; B K Kwak; R Loffroy; J F Geschwind
Journal:  Curr Pharm Biotechnol       Date:  2010-08       Impact factor: 2.837

7.  Identification of yeast DNA topoisomerase II mutants resistant to the antitumor drug doxorubicin: implications for the mechanisms of doxorubicin action and cytotoxicity.

Authors:  S Patel; A U Sprung; B A Keller; V J Heaton; L M Fisher
Journal:  Mol Pharmacol       Date:  1997-10       Impact factor: 4.436

8.  A small molecule suppressor of FK506 that targets the mitochondria and modulates ionic balance in Saccharomyces cerevisiae.

Authors:  Rebecca A Butcher; Stuart L Schreiber
Journal:  Chem Biol       Date:  2003-06

9.  Genome-wide analysis of intracellular pH reveals quantitative control of cell division rate by pH(c) in Saccharomyces cerevisiae.

Authors:  Rick Orij; Malene L Urbanus; Franco J Vizeacoumar; Guri Giaever; Charles Boone; Corey Nislow; Stanley Brul; Gertien J Smits
Journal:  Genome Biol       Date:  2012-09-10       Impact factor: 13.583

10.  Systematic exploration of synergistic drug pairs.

Authors:  Murat Cokol; Hon Nian Chua; Murat Tasan; Beste Mutlu; Zohar B Weinstein; Yo Suzuki; Mehmet E Nergiz; Michael Costanzo; Anastasia Baryshnikova; Guri Giaever; Corey Nislow; Chad L Myers; Brenda J Andrews; Charles Boone; Frederick P Roth
Journal:  Mol Syst Biol       Date:  2011-11-08       Impact factor: 11.429

View more
  16 in total

Review 1.  Multidrug evolutionary strategies to reverse antibiotic resistance.

Authors:  Michael Baym; Laura K Stone; Roy Kishony
Journal:  Science       Date:  2016-01-01       Impact factor: 47.728

2.  Pairwise antibiotic interactions in Escherichia coli: triclosan, rifampicin and aztreonam with nine other classes of antibiotics.

Authors:  Caroline Nguyen; Alice Zhou; Ayesha Khan; Jeffrey H Miller; Pamela Yeh
Journal:  J Antibiot (Tokyo)       Date:  2016-03-09       Impact factor: 2.649

3.  A Systematic Screen Reveals a Diverse Collection of Medications That Induce Antifungal Resistance in Candida Species.

Authors:  Arielle Butts; Parker Reitler; Andrew T Nishimoto; Christian DeJarnette; Leanna R Estredge; Tracy L Peters; Michael P Veve; P David Rogers; Glen E Palmer
Journal:  Antimicrob Agents Chemother       Date:  2019-04-25       Impact factor: 5.191

Review 4.  Suppressive drug combinations and their potential to combat antibiotic resistance.

Authors:  Nina Singh; Pamela J Yeh
Journal:  J Antibiot (Tokyo)       Date:  2017-09-06       Impact factor: 2.649

5.  Species-specific activity of antibacterial drug combinations.

Authors:  Ana Rita Brochado; Anja Telzerow; Jacob Bobonis; Manuel Banzhaf; André Mateus; Joel Selkrig; Emily Huth; Stefan Bassler; Jordi Zamarreño Beas; Matylda Zietek; Natalie Ng; Sunniva Foerster; Benjamin Ezraty; Béatrice Py; Frédéric Barras; Mikhail M Savitski; Peer Bork; Stephan Göttig; Athanasios Typas
Journal:  Nature       Date:  2018-07-04       Impact factor: 49.962

6.  Antagonism screen for inhibitors of bacterial cell wall biogenesis uncovers an inhibitor of undecaprenyl diphosphate synthase.

Authors:  Maya A Farha; Tomasz L Czarny; Cullen L Myers; Liam J Worrall; Shawn French; Deborah G Conrady; Yang Wang; Eric Oldfield; Natalie C J Strynadka; Eric D Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

7.  Commonly Used Oncology Drugs Decrease Antifungal Effectiveness against Candida and Aspergillus Species.

Authors:  Arielle Butts; Parker Reitler; Wenbo Ge; Jarrod R Fortwendel; Glen E Palmer
Journal:  Antimicrob Agents Chemother       Date:  2018-06-26       Impact factor: 5.191

8.  When more is less: Emergent suppressive interactions in three-drug combinations.

Authors:  Casey Beppler; Elif Tekin; Cynthia White; Zhiyuan Mao; Jeffrey H Miller; Robert Damoiseaux; Van M Savage; Pamela J Yeh
Journal:  BMC Microbiol       Date:  2017-05-06       Impact factor: 3.605

9.  Quantitative bioassay to identify antimicrobial drugs through drug interaction fingerprint analysis.

Authors:  Zohar B Weinstein; Muhammad H Zaman
Journal:  Sci Rep       Date:  2017-02-16       Impact factor: 4.379

10.  A general pharmacodynamic interaction model identifies perpetrators and victims in drug interactions.

Authors:  Sebastian G Wicha; Chunli Chen; Oskar Clewe; Ulrika S H Simonsson
Journal:  Nat Commun       Date:  2017-12-14       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.