Literature DB >> 24698983

Dipolar Assisted Assignment Protocol (DAAP) for MAS solid-state NMR of rotationally aligned membrane proteins in phospholipid bilayers.

Bibhuti B Das1, Hua Zhang1, Stanley J Opella2.   

Abstract

A method for making resonance assignments in magic angle spinning solid-state NMR spectra of membrane proteins that utilizes the range of heteronuclear dipolar coupling frequencies in combination with conventional chemical shift based assignment methods is demonstrated. The Dipolar Assisted Assignment Protocol (DAAP) takes advantage of the rotational alignment of the membrane proteins in liquid crystalline phospholipid bilayers. Improved resolution is obtained by combining the magnetically inequivalent heteronuclear dipolar frequencies with isotropic chemical shift frequencies. Spectra with both dipolar and chemical shift frequency axes assist with resonance assignments. DAAP can be readily extended to three- and four-dimensional experiments and to include both backbone and side chain sites in proteins.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  MAS; Membrane protein; Solid state NMR; Vpu

Mesh:

Substances:

Year:  2014        PMID: 24698983      PMCID: PMC4043445          DOI: 10.1016/j.jmr.2014.02.018

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  29 in total

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6.  A comparison of NCO and NCA transfer methods for biological solid-state NMR spectroscopy.

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9.  Dipolar waves as NMR maps of protein structure.

Authors:  Michael F Mesleh; Gianluigi Veglia; Tara M DeSilva; Francesca M Marassi; Stanley J Opella
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Authors:  Sang Ho Park; Anna A De Angelis; Alexander A Nevzorov; Chin H Wu; Stanley J Opella
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  4 in total

1.  Multiple acquisition/multiple observation separated local field/chemical shift correlation solid-state magic angle spinning NMR spectroscopy.

Authors:  Bibhuti B Das; Stanley J Opella
Journal:  J Magn Reson       Date:  2014-06-28       Impact factor: 2.229

Review 2.  Membrane protein structure from rotational diffusion.

Authors:  Bibhuti B Das; Sang Ho Park; Stanley J Opella
Journal:  Biochim Biophys Acta       Date:  2014-04-18

3.  Structural determination of virus protein U from HIV-1 by NMR in membrane environments.

Authors:  Hua Zhang; Eugene C Lin; Bibhuti B Das; Ye Tian; Stanley J Opella
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4.  Efficient and stable reconstitution of the ABC transporter BmrA for solid-state NMR studies.

Authors:  Britta Kunert; Carole Gardiennet; Denis Lacabanne; Daniel Calles-Garcia; Pierre Falson; Jean-Michel Jault; Beat H Meier; François Penin; Anja Böckmann
Journal:  Front Mol Biosci       Date:  2014-06-12
  4 in total

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