Literature DB >> 24695639

Posttranscriptional regulation of oral bacterial adaptive responses.

Justin Merritt1, Zhiyun Chen1, Nan Liu1, Jens Kreth1.   

Abstract

Within the past 10 years, it has become increasingly evident that posttranscriptional regulation is among the most important mechanisms used by bacteria to modulate gene expression in response to environmental perturbations. Posttranscriptional mechanisms provide a much faster response and lower energy burden compared to most transcription regulatory pathways and they have the unique advantage that they can override existing transcriptional responses once the environment changes. Because of this, virulence factor gene expression is particularly suited for posttranscriptional control, and not surprisingly, an abundance of recent evidence indicates that posttranscriptional regulators are the predominant virulence regulators of human pathogens. Typically, this involves global riboregulators that primarily serve as modulators of virulence gene translation initiation and/or mRNA stability. Surprisingly little has been reported about posttranscriptional regulatory pathways in oral bacteria, but recent results suggest that oral species are equally dependent upon posttranscriptional control of their adaptive genetic responses. In this report, we discuss the major themes in RNA-based regulation of gene expression and review the available literature related to the most commonly studied oral bacterial species.

Entities:  

Keywords:  Environmental Adaptation; Gene Regulation; Oral Microbiology, Streptococcus; Posttranscriptional Regulation; RNase E; RNase J1; RNase J2; RNase Y; Ribonucleases; Small RNA, RNA Processing

Year:  2014        PMID: 24695639      PMCID: PMC3969799          DOI: 10.1007/s40496-013-0005-4

Source DB:  PubMed          Journal:  Curr Oral Health Rep


  79 in total

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Authors:  Erik Holmqvist; Johan Reimegård; Maaike Sterk; Nina Grantcharova; Ute Römling; Eduard Gerhart Heinrich Wagner
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

2.  Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.

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Journal:  Nature       Date:  2005-10-20       Impact factor: 49.962

3.  Small RNA binding to 5' mRNA coding region inhibits translational initiation.

Authors:  Marie Bouvier; Cynthia M Sharma; Franziska Mika; Knud H Nierhaus; Jörg Vogel
Journal:  Mol Cell       Date:  2008-12-26       Impact factor: 17.970

4.  Multiple roles of RNase Y in Streptococcus pyogenes mRNA processing and degradation.

Authors:  Zhiyun Chen; Andreas Itzek; Horst Malke; Joseph J Ferretti; Jens Kreth
Journal:  J Bacteriol       Date:  2013-03-29       Impact factor: 3.490

5.  Identification and expression of small non-coding RNA, L10-Leader, in different growth phases of Streptococcus mutans.

Authors:  Li Xia; Wei Xia; Shaohua Li; Wuju Li; Jiaojiao Liu; Hongmei Ding; Jie Li; Hui Li; Ying Chen; Xueting Su; Wei Wang; Li Sun; Chenglong Wang; Ningsheng Shao; Bingfeng Chu
Journal:  Nucleic Acid Ther       Date:  2012-04-02       Impact factor: 5.486

6.  Silkworm pathogenic bacteria infection model for identification of novel virulence genes.

Authors:  Chikara Kaito; Kenji Kurokawa; Yasuhiko Matsumoto; Yutaka Terao; Shigetada Kawabata; Shigeyuki Hamada; Kazuhisa Sekimizu
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

7.  AphA and LuxR/HapR reciprocally control quorum sensing in vibrios.

Authors:  Steven T Rutherford; Julia C van Kessel; Yi Shao; Bonnie L Bassler
Journal:  Genes Dev       Date:  2011-02-15       Impact factor: 11.361

8.  The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae.

Authors:  Derrick H Lenz; Kenny C Mok; Brendan N Lilley; Rahul V Kulkarni; Ned S Wingreen; Bonnie L Bassler
Journal:  Cell       Date:  2004-07-09       Impact factor: 41.582

9.  Novel iron-regulated and Fur-regulated small regulatory RNAs in Aggregatibacter actinomycetemcomitans.

Authors:  J J Amarasinghe; T D Connell; F A Scannapieco; E M Haase
Journal:  Mol Oral Microbiol       Date:  2012-04-05       Impact factor: 3.563

Review 10.  The social fabric of the RNA degradosome.

Authors:  Katarzyna J Bandyra; Marie Bouvier; Agamemnon J Carpousis; Ben F Luisi
Journal:  Biochim Biophys Acta       Date:  2013-02-28
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  6 in total

1.  Post-transcriptional regulation by distal Shine-Dalgarno sequences in the grpE-dnaK intergenic region of Streptococcus mutans.

Authors:  Sara R Palmer; Robert A Burne
Journal:  Mol Microbiol       Date:  2015-09-04       Impact factor: 3.501

2.  RNases J1 and J2 are critical pleiotropic regulators in Streptococcus mutans.

Authors:  Xi Chen; Nan Liu; Sharukh Khajotia; Fengxia Qi; Justin Merritt
Journal:  Microbiology       Date:  2015-01-29       Impact factor: 2.777

3.  A newly identified duplex RNA unwinding activity of archaeal RNase J depends on processive exoribonucleolysis coupled steric occlusion by its structural archaeal loops.

Authors:  Jie Li; Yanjie Hou; Xien Gu; Lei Yue; Lu Guo; Defeng Li; Xiuzhu Dong
Journal:  RNA Biol       Date:  2020-06-18       Impact factor: 4.652

4.  RNA regulators of host immunity and pathogen adaptive responses in the oral cavity.

Authors:  Jens Kreth; Nan Liu; Zhiyun Chen; Justin Merritt
Journal:  Microbes Infect       Date:  2015-03-17       Impact factor: 2.700

5.  Genome-Wide Identification of Novel sRNAs in Streptococcus mutans.

Authors:  Madeline C Krieger; Justin Merritt; Rahul Raghavan
Journal:  J Bacteriol       Date:  2022-03-14       Impact factor: 3.476

Review 6.  Genome-wide analyses of small non-coding RNAs in streptococci.

Authors:  Nadja Patenge; Roberto Pappesch; Afsaneh Khani; Bernd Kreikemeyer
Journal:  Front Genet       Date:  2015-05-20       Impact factor: 4.599

  6 in total

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