Literature DB >> 24684685

A robust, simple, high-throughput technique for time-resolved plant volatile analysis in field experiments.

Mario Kallenbach1, Youngjoo Oh, Elisabeth J Eilers, Daniel Veit, Ian T Baldwin, Meredith C Schuman.   

Abstract

Plant volatiles (PVs) mediate interactions between plants and arthropods, microbes and other plants, and are involved in responses to abiotic stress. PV emissions are therefore influenced by many environmental factors, including herbivore damage, microbial invasion, and cues from neighboring plants, and also light regime, temperature, humidity and nutrient availability. Thus, an understanding of the physiological and ecological functions of PVs must be based on measurements reflecting PV emissions under natural conditions. However, PVs are usually sampled in the artificial environments of laboratories or climate chambers. Sampling of PVs in natural environments is difficult, being limited by the need to transport, maintain and provide power to instruments, or use expensive sorbent devices in replicate. Ideally, PVs should be measured in natural settings with high replication, spatio-temporal resolution and sensitivity, and modest costs. Polydimethylsiloxane (PDMS), a sorbent commonly used for PV sampling, is available as silicone tubing for as little as 0.60 € m(-1) (versus 100-550 € each for standard PDMS sorbent devices). Small pieces of silicone tubing (STs) of various lengths from millimeters to centimeters may be added to any experimental setting and used for headspace sampling, with little manipulation of the organism or headspace. STs have sufficiently fast absorption kinetics and large capacity to sample plant headspaces over a timescale of minutes to hours, and thus can produce biologically meaningful 'snapshots' of PV blends. When combined with thermal desorption coupled to GC-MS (a 40-year-old widely available technology), use of STs yields reproducible, sensitive, spatio-temporally resolved quantitative data from headspace samples taken in natural environments.
© 2014 The Authors The Plant Journal © 2014 John Wiley & Sons Ltd.

Entities:  

Keywords:  Manduca sexta; Nicotiana attenuata; headspace analysis; indirect defense; polydimethylsiloxane; silicone tubing; technical advance

Mesh:

Substances:

Year:  2014        PMID: 24684685      PMCID: PMC4190661          DOI: 10.1111/tpj.12523

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  40 in total

Review 1.  The specificity of herbivore-induced plant volatiles in attracting herbivore enemies.

Authors:  Andrea Clavijo McCormick; Sybille B Unsicker; Jonathan Gershenzon
Journal:  Trends Plant Sci       Date:  2012-04-12       Impact factor: 18.313

2.  Comparison of glass vessels and plastic bags for enclosing living plant parts for headspace analysis.

Authors:  Alex Stewart-Jones; Guy M Poppy
Journal:  J Chem Ecol       Date:  2006-05-12       Impact factor: 2.626

3.  Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst.

Authors:  Jianguo Xia; David S Wishart
Journal:  Nat Protoc       Date:  2011-05-05       Impact factor: 13.491

4.  Biomimetic measurement of allelochemical dynamics in the rhizosphere.

Authors:  Jeffrey D Weidenhamer
Journal:  J Chem Ecol       Date:  2005-02       Impact factor: 2.626

5.  Ecophysiological comparison of direct and indirect defenses in Nicotiana attenuata.

Authors:  R Halitschke; A Keßler; J Kahl; A Lorenz; I T Baldwin
Journal:  Oecologia       Date:  2000-08       Impact factor: 3.225

6.  ISSR and AFLP analysis of the temporal and spatial population structure of the post-fire annual, Nicotiana attenuata, in SW Utah.

Authors:  Rahul A Bahulikar; Dominic Stanculescu; Catherine A Preston; Ian T Baldwin
Journal:  BMC Ecol       Date:  2004-09-06       Impact factor: 2.964

7.  Polymorphism in jasmonate signaling partially accounts for the variety of volatiles produced by Nicotiana attenuata plants in a native population.

Authors:  Meredith C Schuman; Nicolas Heinzel; Emmanuel Gaquerel; Ales Svatos; Ian T Baldwin
Journal:  New Phytol       Date:  2009-06-15       Impact factor: 10.151

8.  Natural history-driven, plant-mediated RNAi-based study reveals CYP6B46's role in a nicotine-mediated antipredator herbivore defense.

Authors:  Pavan Kumar; Sagar S Pandit; Anke Steppuhn; Ian T Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-30       Impact factor: 11.205

9.  MetaboAnalyst: a web server for metabolomic data analysis and interpretation.

Authors:  Jianguo Xia; Nick Psychogios; Nelson Young; David S Wishart
Journal:  Nucleic Acids Res       Date:  2009-05-08       Impact factor: 16.971

10.  Canopy light cues affect emission of constitutive and methyl jasmonate-induced volatile organic compounds in Arabidopsis thaliana.

Authors:  Wouter Kegge; Berhane T Weldegergis; Roxina Soler; Marleen Vergeer-Van Eijk; Marcel Dicke; Laurentius A C J Voesenek; Ronald Pierik
Journal:  New Phytol       Date:  2013-07-12       Impact factor: 10.151

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  25 in total

1.  Using the right tool for the job: the difference between unsupervised and supervised analyses of multivariate ecological data.

Authors:  Eric R Scott; Elizabeth E Crone
Journal:  Oecologia       Date:  2021-02-12       Impact factor: 3.225

2.  Separate Pathways Contribute to the Herbivore-Induced Formation of 2-Phenylethanol in Poplar.

Authors:  Jan Günther; Nathalie D Lackus; Axel Schmidt; Meret Huber; Heike-Jana Stödtler; Michael Reichelt; Jonathan Gershenzon; Tobias G Köllner
Journal:  Plant Physiol       Date:  2019-03-07       Impact factor: 8.340

3.  Branch-Localized Induction Promotes Efficacy of Volatile Defences and Herbivore Predation in Trees.

Authors:  Martin Volf; Alexander Weinhold; Carlo L Seifert; Tereza Holicová; Henriette Uthe; Erika Alander; Ronny Richter; Juha-Pekka Salminen; Christian Wirth; Nicole M van Dam
Journal:  J Chem Ecol       Date:  2020-11-12       Impact factor: 2.626

4.  Application of Silicone Tubing for Robust, Simple, High-throughput, and Time-resolved Analysis of Plant Volatiles in Field Experiments.

Authors:  Mario Kallenbach; Daniel Veit; Elisabeth J Eilers; Meredith C Schuman
Journal:  Bio Protoc       Date:  2015-02-05

5.  Flower-specific jasmonate signaling regulates constitutive floral defenses in wild tobacco.

Authors:  Ran Li; Ming Wang; Yang Wang; Meredith C Schuman; Arne Weinhold; Martin Schäfer; Guillermo H Jiménez-Alemán; Andrea Barthel; Ian T Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

6.  Silencing Nicotiana attenuata LHY and ZTL alters circadian rhythms in flowers.

Authors:  Felipe Yon; Youngsung Joo; Lucas Cortés Llorca; Eva Rothe; Ian T Baldwin; Sang-Gyu Kim
Journal:  New Phytol       Date:  2015-10-06       Impact factor: 10.151

7.  Ectopic terpene synthase expression enhances sesquiterpene emission in Nicotiana attenuata without altering defense or development of transgenic plants or neighbors.

Authors:  Meredith C Schuman; Evan C Palmer-Young; Axel Schmidt; Jonathan Gershenzon; Ian T Baldwin
Journal:  Plant Physiol       Date:  2014-09-03       Impact factor: 8.340

8.  Novel Set-Up for Low-Disturbance Sampling of Volatile and Non-volatile Compounds from Plant Roots.

Authors:  Elisabeth J Eilers; Gerhard Pauls; Matthias C Rillig; Bill S Hansson; Monika Hilker; Andreas Reinecke
Journal:  J Chem Ecol       Date:  2015-03-22       Impact factor: 2.626

9.  How scent and nectar influence floral antagonists and mutualists.

Authors:  Danny Kessler; Mario Kallenbach; Celia Diezel; Eva Rothe; Mark Murdock; Ian T Baldwin
Journal:  Elife       Date:  2015-07-01       Impact factor: 8.140

10.  Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping.

Authors:  Rakesh Santhanam; Van Thi Luu; Arne Weinhold; Jay Goldberg; Youngjoo Oh; Ian T Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-25       Impact factor: 11.205

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