Literature DB >> 24681720

Single-cell in situ RNA profiling by sequential hybridization.

Eric Lubeck1, Ahmet F Coskun1, Timur Zhiyentayev2, Mubhij Ahmad2, Long Cai2.   

Abstract

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Year:  2014        PMID： 24681720      PMCID： PMC4085791          DOI： 10.1038/nmeth.2892

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  4 in total

1.  In situ sequencing for RNA analysis in preserved tissue and cells.

Authors:  Rongqin Ke; Marco Mignardi; Alexandra Pacureanu; Jessica Svedlund; Johan Botling; Carolina Wählby; Mats Nilsson
Journal:  Nat Methods       Date:  2013-07-14       Impact factor: 28.547

2.  Single-cell systems biology by super-resolution imaging and combinatorial labeling.

Authors:  Eric Lubeck; Long Cai
Journal:  Nat Methods       Date:  2012-06-03       Impact factor: 28.547

3.  Single-chromosome transcriptional profiling reveals chromosomal gene expression regulation.

Authors:  Marshall J Levesque; Arjun Raj
Journal:  Nat Methods       Date:  2013-02-17       Impact factor: 28.547

4.  Visualizing SNVs to quantify allele-specific expression in single cells.

Authors:  Marshall J Levesque; Paul Ginart; Yichen Wei; Arjun Raj
Journal:  Nat Methods       Date:  2013-08-04       Impact factor: 28.547
  4 in total
  255 in total

1.  Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping.

Authors:  Ken Y Chan; Nicholas C Flytzanis; Bin Yang; Jennifer B Treweek; Benjamin E Deverman; Alon Greenbaum; Antti Lignell; Cheng Xiao; Long Cai; Mark S Ladinsky; Pamela J Bjorkman; Charless C Fowlkes; Viviana Gradinaru
Journal:  Nat Protoc       Date:  2015-10-22       Impact factor: 13.491

2.  Single Molecule RNA FISH (smFISH) in Whole-Mount Mouse Embryonic Organs.

Authors:  Shaohe Wang
Journal:  Curr Protoc Cell Biol       Date:  2018-11-05

Review 3.  Extracting structural and functional features of widely distributed biological circuits with single cell resolution via tissue clearing and delivery vectors.

Authors:  Jennifer Brooke Treweek; Viviana Gradinaru
Journal:  Curr Opin Biotechnol       Date:  2016-07-06       Impact factor: 9.740

4.  Constitutive splicing and economies of scale in gene expression.

Authors:  Fangyuan Ding; Michael B Elowitz
Journal:  Nat Struct Mol Biol       Date:  2019-05-27       Impact factor: 15.369

5.  3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing.

Authors:  Huy Q Nguyen; Shyamtanu Chattoraj; David Castillo; Son C Nguyen; Guy Nir; Antonios Lioutas; Elliot A Hershberg; Nuno M C Martins; Paul L Reginato; Mohammed Hannan; Brian J Beliveau; George M Church; Evan R Daugharthy; Marc A Marti-Renom; C-Ting Wu
Journal:  Nat Methods       Date:  2020-07-27       Impact factor: 28.547

6.  DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction.

Authors:  Joshua A Weinstein; Aviv Regev; Feng Zhang
Journal:  Cell       Date:  2019-06-20       Impact factor: 41.582

7.  A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure.

Authors:  Maayan Baron; Adrian Veres; Samuel L Wolock; Aubrey L Faust; Renaud Gaujoux; Amedeo Vetere; Jennifer Hyoje Ryu; Bridget K Wagner; Shai S Shen-Orr; Allon M Klein; Douglas A Melton; Itai Yanai
Journal:  Cell Syst       Date:  2016-09-22       Impact factor: 10.304

8.  Single-cell systems biology: probing the basic unit of information flow.

Authors:  Simona Patange; Michelle Girvan; Daniel R Larson
Journal:  Curr Opin Syst Biol       Date:  2017-12-06

Review 9.  Quantitative imaging of lipid droplets in single cells.

Authors:  Anushka Gupta; Gabriel F Dorlhiac; Aaron M Streets
Journal:  Analyst       Date:  2019-01-28       Impact factor: 4.616

10.  The 4D nucleome project.

Authors:  Job Dekker; Andrew S Belmont; Mitchell Guttman; Victor O Leshyk; John T Lis; Stavros Lomvardas; Leonid A Mirny; Clodagh C O'Shea; Peter J Park; Bing Ren; Joan C Ritland Politz; Jay Shendure; Sheng Zhong
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962
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