Literature DB >> 24680775

Mitogenomic circumscription of a novel percomorph fish clade mainly comprising "Syngnathoidei" (Teleostei).

Ha Yeun Song1, Kohji Mabuchi2, Takashi P Satoh3, Jon A Moore4, Yusuke Yamanoue5, Masaki Miya6, Mutsumi Nishida7.   

Abstract

Percomorpha, comprising about 60% of modern teleost fishes, has been described as the "(unresolved) bush at the top" of the tree, with its intrarelationships still being ambiguous owing to huge diversity (>15,000 species). Recent molecular phylogenetic studies based on extensive taxon and character sampling, however, have revealed a number of unexpected clades of Percomorpha, and one of which is composed of Syngnathoidei (seahorses, pipefishes, and their relatives) plus several groups distributed across three different orders. To circumscribe the clade more definitely, we sampled several candidate taxa with reference to the previous studies and newly determined whole mitochondrial genome (mitogenome) sequences for 16 percomorph species across syngnathoids, dactylopterids, and their putatively closely-related fishes (Mullidae, Callionymoidei, Malacanthidae). Unambiguously aligned sequences (13,872 bp) from those 16 species plus 78 percomorphs and two outgroups (total 96 species) were subjected to partitioned Bayesian and maximum likelihood analyses. The resulting trees revealed a highly supported clade comprising seven families in Syngnathoidei (Gasterosteiformes), Dactylopteridae (Scorpaeniformes), Mullidae in Percoidei and two families in Callionymoidei (Perciformes). We herein proposed to call this clade "Syngnathiformes" following the latest nuclear DNA studies with some revisions on the included families.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Callionymoidei; Dactylopteridae; Mullidae; Percomorpha; Seahorses; Syngnathiformes

Mesh:

Substances:

Year:  2014        PMID: 24680775     DOI: 10.1016/j.gene.2014.03.040

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  6 in total

1.  Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae).

Authors:  Sang-Yun Han; Jin-Koo Kim; Yoshiaki Kai; Hiroshi Senou
Journal:  Zookeys       Date:  2017-10-31       Impact factor: 1.546

2.  Phylogenetic classification of bony fishes.

Authors:  Ricardo Betancur-R; Edward O Wiley; Gloria Arratia; Arturo Acero; Nicolas Bailly; Masaki Miya; Guillaume Lecointre; Guillermo Ortí
Journal:  BMC Evol Biol       Date:  2017-07-06       Impact factor: 3.260

3.  Characterization of the complete mitochondrial genome of Dactylopterus volitans (Syngnathiformes, Dactylopteridae).

Authors:  Ha Yeun Song; Young Ji Choi; Seonmi Jo; Bora Kim; Seung-Hyun Jung; Jong Su Yoo; Dae-Sung Lee
Journal:  Mitochondrial DNA B Resour       Date:  2019-12-23       Impact factor: 0.658

4.  Next-generation sequencing yields the first complete mitochondrial genome of the ruby dragonet Synchiropus sycorax (Syngnathiformes, Callionymidae).

Authors:  Cuili Wang; Shanshan Zhou
Journal:  Mitochondrial DNA B Resour       Date:  2019-12-18       Impact factor: 0.658

5.  A highly contiguous nuclear genome assembly of the mandarinfish Synchiropus splendidus (Syngnathiformes: Callionymidae).

Authors:  Martin Stervander; William A Cresko
Journal:  G3 (Bethesda)       Date:  2021-12-08       Impact factor: 3.154

6.  Phylogenomic analysis of Syngnathidae reveals novel relationships, origins of endemic diversity and variable diversification rates.

Authors:  Josefin Stiller; Graham Short; Healy Hamilton; Norah Saarman; Sarah Longo; Peter Wainwright; Greg W Rouse; W Brian Simison
Journal:  BMC Biol       Date:  2022-03-27       Impact factor: 7.431

  6 in total

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