Literature DB >> 24679532

The virome in mammalian physiology and disease.

Herbert W Virgin1.   

Abstract

The virome contains the most abundant and fastest mutating genetic elements on Earth. The mammalian virome is constituted of viruses that infect host cells, virus-derived elements in our chromosomes, and viruses that infect the broad array of other types of organisms that inhabit us. Virome interactions with the host cannot be encompassed by a monotheistic view of viruses as pathogens. Instead, the genetic and transcriptional identity of mammals is defined in part by our coevolved virome, a concept with profound implications for understanding health and disease.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24679532      PMCID: PMC3977141          DOI: 10.1016/j.cell.2014.02.032

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  75 in total

1.  The antibody response to bacteriophage phi-X 174 in newborn premature infants.

Authors:  J W UHR; J DANCIS; E C FRANKLIN; M S FINKELSTEIN; E W LEWIS
Journal:  J Clin Invest       Date:  1962-07       Impact factor: 14.808

2.  The fecal viral flora of California sea lions.

Authors:  Linlin Li; Tongling Shan; Chunlin Wang; Colette Côté; John Kolman; David Onions; Frances M D Gulland; Eric Delwart
Journal:  J Virol       Date:  2011-07-27       Impact factor: 5.103

3.  Dual infection with HIV and malaria fuels the spread of both diseases in sub-Saharan Africa.

Authors:  Laith J Abu-Raddad; Padmaja Patnaik; James G Kublin
Journal:  Science       Date:  2006-12-08       Impact factor: 47.728

4.  Tumor-specific bacteriophages induce tumor destruction through activation of tumor-associated macrophages.

Authors:  Fredrik Eriksson; Panagiotis Tsagozis; Kajsa Lundberg; Roham Parsa; Sara M Mangsbo; Mats A A Persson; Robert A Harris; Pavel Pisa
Journal:  J Immunol       Date:  2009-03-01       Impact factor: 5.422

Review 5.  The molecular cell biology of interferon-gamma and its receptor.

Authors:  M A Farrar; R D Schreiber
Journal:  Annu Rev Immunol       Date:  1993       Impact factor: 28.527

6.  Bacteriophage adhering to mucus provide a non-host-derived immunity.

Authors:  Jeremy J Barr; Rita Auro; Mike Furlan; Katrine L Whiteson; Marcella L Erb; Joe Pogliano; Aleksandr Stotland; Roland Wolkowicz; Andrew S Cutting; Kelly S Doran; Peter Salamon; Merry Youle; Forest Rohwer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-20       Impact factor: 11.205

7.  Anti-vaccinia virus effect of M13 bacteriophage DNA.

Authors:  K Mori; T Kubo; Y Kibayashi; T Ohkuma; A Kaji
Journal:  Antiviral Res       Date:  1996-06       Impact factor: 5.970

Review 8.  Kingdom-agnostic metagenomics and the importance of complete characterization of enteric microbial communities.

Authors:  Jason M Norman; Scott A Handley; Herbert W Virgin
Journal:  Gastroenterology       Date:  2014-02-05       Impact factor: 22.682

9.  PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information.

Authors:  Florent Angly; Beltran Rodriguez-Brito; David Bangor; Pat McNairnie; Mya Breitbart; Peter Salamon; Ben Felts; James Nulton; Joseph Mahaffy; Forest Rohwer
Journal:  BMC Bioinformatics       Date:  2005-03-02       Impact factor: 3.169

Review 10.  Bats and their virome: an important source of emerging viruses capable of infecting humans.

Authors:  Ina Smith; Lin-Fa Wang
Journal:  Curr Opin Virol       Date:  2012-12-21       Impact factor: 7.090

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  213 in total

1.  The microbial metabolite desaminotyrosine protects from influenza through type I interferon.

Authors:  Ashley L Steed; George P Christophi; Gerard E Kaiko; Lulu Sun; Victoria M Goodwin; Umang Jain; Ekaterina Esaulova; Maxim N Artyomov; David J Morales; Michael J Holtzman; Adrianus C M Boon; Deborah J Lenschow; Thaddeus S Stappenbeck
Journal:  Science       Date:  2017-08-04       Impact factor: 47.728

Review 2.  The Microbiome, Systemic Immune Function, and Allotransplantation.

Authors:  Anoma Nellore; Jay A Fishman
Journal:  Clin Microbiol Rev       Date:  2016-01       Impact factor: 26.132

3.  A Viral Exposure Signature Defines Early Onset of Hepatocellular Carcinoma.

Authors:  Jinping Liu; Wei Tang; Anuradha Budhu; Marshonna Forgues; Maria O Hernandez; Julián Candia; Yujin Kim; Elise D Bowman; Stefan Ambs; Yongmei Zhao; Bao Tran; Xiaolin Wu; Christopher Koh; Pallavi Surana; T Jake Liang; Maria Guarnera; Dean Mann; Manoj Rajaure; Tim F Greten; Zhanwei Wang; Herbert Yu; Xin Wei Wang
Journal:  Cell       Date:  2020-06-10       Impact factor: 41.582

Review 4.  The Gut Microbiome: Connecting Spatial Organization to Function.

Authors:  Carolina Tropini; Kristen A Earle; Kerwyn Casey Huang; Justin L Sonnenburg
Journal:  Cell Host Microbe       Date:  2017-04-12       Impact factor: 21.023

5.  TLR-7 activation enhances IL-22-mediated colonization resistance against vancomycin-resistant enterococcus.

Authors:  Michael C Abt; Charlie G Buffie; Bože Sušac; Simone Becattini; Rebecca A Carter; Ingrid Leiner; James W Keith; David Artis; Lisa C Osborne; Eric G Pamer
Journal:  Sci Transl Med       Date:  2016-02-24       Impact factor: 17.956

6.  Evaluation of the serum virome in calves persistently infected with Pestivirus A, presenting or not presenting mucosal disease.

Authors:  Matheus N Weber; Samuel P Cibulski; Simone Silveira; Franciele M Siqueira; Ana Cristina S Mósena; Mariana S da Silva; Juliana C Olegário; Ana Paula M Varela; Thaís F Teixeira; Matheus V Bianchi; David Driemeier; Saulo P Pavarini; Fabiana Q Mayer; Paulo M Roehe; Cláudio W Canal
Journal:  Virus Genes       Date:  2018-09-14       Impact factor: 2.332

7.  Accounting for reciprocal host-microbiome interactions in experimental science.

Authors:  Thaddeus S Stappenbeck; Herbert W Virgin
Journal:  Nature       Date:  2016-06-09       Impact factor: 49.962

Review 8.  The virome in host health and disease.

Authors:  Ken Cadwell
Journal:  Immunity       Date:  2015-05-19       Impact factor: 31.745

9.  Type I interferons link viral infection to enhanced epithelial turnover and repair.

Authors:  Lulu Sun; Hiroyuki Miyoshi; Sofia Origanti; Timothy J Nice; Alexandra C Barger; Nicholas A Manieri; Leslie A Fogel; Anthony R French; David Piwnica-Worms; Helen Piwnica-Worms; Herbert W Virgin; Deborah J Lenschow; Thaddeus S Stappenbeck
Journal:  Cell Host Microbe       Date:  2014-12-04       Impact factor: 21.023

10.  Laboratory mice born to wild mice have natural microbiota and model human immune responses.

Authors:  Jasmin Herz; Brian G Vassallo; Stephan P Rosshart; Ashli Hunter; Morgan K Wall; Jonathan H Badger; John A McCulloch; Dimitrios G Anastasakis; Aishe A Sarshad; Irina Leonardi; Nicholas Collins; Joshua A Blatter; Seong-Ji Han; Samira Tamoutounour; Svetlana Potapova; Mark B Foster St Claire; Wuxing Yuan; Shurjo K Sen; Matthew S Dreier; Benedikt Hild; Markus Hafner; David Wang; Iliyan D Iliev; Yasmine Belkaid; Giorgio Trinchieri; Barbara Rehermann
Journal:  Science       Date:  2019-08-01       Impact factor: 47.728

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