Literature DB >> 24678680

Progress and potential: training in genomic pathology.

Richard L Haspel1, Randall J Olsen, Anna Berry, Charles E Hill, John D Pfeifer, Iris Schrijver, Karen L Kaul.   

Abstract

CONTEXT: Genomic medicine is revolutionizing patient care. Physicians in areas as diverse as oncology, obstetrics, and infectious disease have begun using next-generation sequencing assays as standard diagnostic tools.
OBJECTIVE: To review the role of pathologists in genomic testing as well as current educational programs and future training needs in genomic pathology. DATA SOURCES: Published literature as well as personal experience based on committee membership and genomic pathology curricular design.
CONCLUSIONS: Pathologists, as the directors of the clinical laboratories, must be prepared to integrate genomic testing into their practice. The pathology community has made significant progress in genomics-related education. A continued coordinated and proactive effort will ensure a future vital role for pathologists in the evolving health care system and also the best possible patient care.

Entities:  

Mesh:

Year:  2014        PMID: 24678680      PMCID: PMC4151162          DOI: 10.5858/arpa.2013-0359-SA

Source DB:  PubMed          Journal:  Arch Pathol Lab Med        ISSN: 0003-9985            Impact factor:   5.534


  45 in total

1.  Performance comparison of benchtop high-throughput sequencing platforms.

Authors:  Nicholas J Loman; Raju V Misra; Timothy J Dallman; Chrystala Constantinidou; Saheer E Gharbia; John Wain; Mark J Pallen
Journal:  Nat Biotechnol       Date:  2012-05       Impact factor: 54.908

Review 2.  Next-generation DNA sequencing methods.

Authors:  Elaine R Mardis
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

3.  Rapidly progressive, fatal, inhalation anthrax-like infection in a human: case report, pathogen genome sequencing, pathology, and coordinated response.

Authors:  Angela M Wright; Stephen B Beres; Erin N Consamus; S Wesley Long; Anthony R Flores; Roberto Barrios; G Stefan Richter; So-Young Oh; Gabriella Garufi; Hannah Maier; Ashley L Drews; Kathryn E Stockbauer; Patricia Cernoch; Olaf Schneewind; Randall J Olsen; James M Musser
Journal:  Arch Pathol Lab Med       Date:  2011-08-09       Impact factor: 5.534

4.  A genomic day in the life of a clinical microbiology laboratory.

Authors:  S Wesley Long; Dawn Williams; Chandni Valson; Concepcion C Cantu; Patricia Cernoch; James M Musser; Randall J Olsen
Journal:  J Clin Microbiol       Date:  2013-01-23       Impact factor: 5.948

5.  Utility of prognostic genomic tests in breast cancer practice: The IMPAKT 2012 Working Group Consensus Statement.

Authors:  H A Azim; S Michiels; F Zagouri; S Delaloge; M Filipits; M Namer; P Neven; W F Symmans; A Thompson; F André; S Loi; C Swanton
Journal:  Ann Oncol       Date:  2013-01-20       Impact factor: 32.976

6.  Use of whole-genome sequencing to diagnose a cryptic fusion oncogene.

Authors:  John S Welch; Peter Westervelt; Li Ding; David E Larson; Jeffery M Klco; Shashikant Kulkarni; John Wallis; Ken Chen; Jacqueline E Payton; Robert S Fulton; Joelle Veizer; Heather Schmidt; Tammi L Vickery; Sharon Heath; Mark A Watson; Michael H Tomasson; Daniel C Link; Timothy A Graubert; John F DiPersio; Elaine R Mardis; Timothy J Ley; Richard K Wilson
Journal:  JAMA       Date:  2011-04-20       Impact factor: 56.272

7.  The current status of medical genetics instruction in US and Canadian medical schools.

Authors:  Virginia Carol Thurston; Paula Sue Wales; Mary Alice Bell; Laura Torbeck; James Joseph Brokaw
Journal:  Acad Med       Date:  2007-05       Impact factor: 6.893

8.  Genetics education in medical school: a qualitative study exploring educational experiences and needs.

Authors:  Deanna E Telner; June C Carroll; Yves Talbot
Journal:  Med Teach       Date:  2008       Impact factor: 3.650

Review 9.  Pharmacogenomics in clinical practice and drug development.

Authors:  Andrew R Harper; Eric J Topol
Journal:  Nat Biotechnol       Date:  2012-11-08       Impact factor: 54.908

10.  De novo mutations in ATP1A3 cause alternating hemiplegia of childhood.

Authors:  Erin L Heinzen; Kathryn J Swoboda; Yuki Hitomi; Fiorella Gurrieri; Sophie Nicole; Boukje de Vries; F Danilo Tiziano; Bertrand Fontaine; Nicole M Walley; Sinéad Heavin; Eleni Panagiotakaki; Stefania Fiori; Emanuela Abiusi; Lorena Di Pietro; Matthew T Sweney; Tara M Newcomb; Louis Viollet; Chad Huff; Lynn B Jorde; Sandra P Reyna; Kelley J Murphy; Kevin V Shianna; Curtis E Gumbs; Latasha Little; Kenneth Silver; Louis J Ptáček; Joost Haan; Michel D Ferrari; Ann M Bye; Geoffrey K Herkes; Charlotte M Whitelaw; David Webb; Bryan J Lynch; Peter Uldall; Mary D King; Ingrid E Scheffer; Giovanni Neri; Alexis Arzimanoglou; Arn M J M van den Maagdenberg; Sanjay M Sisodiya; Mohamad A Mikati; David B Goldstein
Journal:  Nat Genet       Date:  2012-07-29       Impact factor: 38.330

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  4 in total

1.  Teaching Genomic Pathology: Translating Team-Based Learning to a Virtual Environment Using Computer-Based Simulation.

Authors:  Richard L Haspel; Asma M Ali; Grace C Huang; Matt H Smith; James B Atkinson; Devon S Chabot-Richards; Robin M Elliott; Karen L Kaul; Suzanne Z Powell; Arundhati Rao; Henry M Rinder; Chad M Vanderbilt; Rebecca Wilcox
Journal:  Arch Pathol Lab Med       Date:  2018-11-30       Impact factor: 5.534

Review 2.  Pharmacogenomics in cardiology--genetics and drug response: 10 years of progress.

Authors:  Larisa H Cavallari; Kristin Weitzel
Journal:  Future Cardiol       Date:  2015-05

3.  Experience with targeted next generation sequencing for the care of lung cancer: insights into promises and limitations of genomic oncology in day-to-day practice.

Authors:  Deepa Rangachari; Paul A VanderLaan; Xiuning Le; Erik Folch; Michael S Kent; Sidharta P Gangadharan; Adnan Majid; Richard L Haspel; Loren J Joseph; Mark S Huberman; Daniel B Costa
Journal:  Cancer Treat Commun       Date:  2015

4.  A Balanced Look at the Implications of Genomic (and Other "Omics") Testing for Disease Diagnosis and Clinical Care.

Authors:  Scott D Boyd; Stephen J Galli; Iris Schrijver; James L Zehnder; Euan A Ashley; Jason D Merker
Journal:  Genes (Basel)       Date:  2014-09-01       Impact factor: 4.096

  4 in total

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