Literature DB >> 24678238

High-Dimensional Longitudinal Genomic Data: An analysis used for monitoring viral infections.

Lawrence Carin, Alfred Hero, Joseph Lucas, David Dunson, Minhua Chen, Ricardo Heñao, Arnau Tibau-Puig, Aimee Zaas, Christopher W Woods, Geoffrey S Ginsburg.   

Abstract

Entities:  

Year:  2012        PMID： 24678238      PMCID： PMC3964679          DOI： 10.1109/MSP.2011.943009

Source DB:  PubMed          Journal:  IEEE Signal Process Mag        ISSN： 1053-5888            Impact factor:   12.551


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  23 in total

1.  Learning the parts of objects by non-negative matrix factorization.

Authors:  D D Lee; H S Seung
Journal:  Nature       Date:  1999-10-21       Impact factor: 49.962

2.  Continuous representations of time-series gene expression data.

Authors:  Ziv Bar-Joseph; Georg K Gerber; David K Gifford; Tommi S Jaakkola; Itamar Simon
Journal:  J Comput Biol       Date:  2003       Impact factor: 1.479

Review 3.  Analyzing time series gene expression data.

Authors:  Ziv Bar-Joseph
Journal:  Bioinformatics       Date:  2004-05-06       Impact factor: 6.937

4.  Comparison of pathogenesis and host immune responses to Candida glabrata and Candida albicans in systemically infected immunocompetent mice.

Authors:  J Brieland; D Essig; C Jackson; D Frank; D Loebenberg; F Menzel; B Arnold; B DiDomenico; R Hare
Journal:  Infect Immun       Date:  2001-08       Impact factor: 3.441

Review 5.  Signaling pathways downstream of pattern-recognition receptors and their cross talk.

Authors:  Myeong Sup Lee; Young-Joon Kim
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

6.  Group SCAD regression analysis for microarray time course gene expression data.

Authors:  Lifeng Wang; Guang Chen; Hongzhe Li
Journal:  Bioinformatics       Date:  2007-04-26       Impact factor: 6.937

7.  Mixtures of regression models for time course gene expression data: evaluation of initialization and random effects.

Authors:  Theresa Scharl; Bettinan Grü; Friedrich Leisch
Journal:  Bioinformatics       Date:  2009-12-29       Impact factor: 6.937

8.  Ineffectiveness of intranasal zinc gluconate for prevention of experimental rhinovirus colds.

Authors:  R B Turner
Journal:  Clin Infect Dis       Date:  2001-10-25       Impact factor: 9.079

9.  Predicting Viral Infection From High-Dimensional Biomarker Trajectories.

Authors:  Minhua Chen; Aimee Zaas; Christopher Woods; Geoffrey S Ginsburg; Joseph Lucas; David Dunson; Lawrence Carin
Journal:  J Am Stat Assoc       Date:  2011-01-01       Impact factor: 5.033

10.  Temporal dynamics of host molecular responses differentiate symptomatic and asymptomatic influenza a infection.

Authors:  Yongsheng Huang; Aimee K Zaas; Arvind Rao; Nicolas Dobigeon; Peter J Woolf; Timothy Veldman; N Christine Øien; Micah T McClain; Jay B Varkey; Bradley Nicholson; Lawrence Carin; Stephen Kingsmore; Christopher W Woods; Geoffrey S Ginsburg; Alfred O Hero
Journal:  PLoS Genet       Date:  2011-08-25       Impact factor: 5.917
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  4 in total

1.  Balancing precision versus cohort transcriptomic analysis of acute and recovery phase of viral bronchiolitis.

Authors:  Ruchir Gupta; Mara L Leimanis; Marie Adams; André S Bachmann; Katie L Uhl; Caleb P Bupp; Nicholas L Hartog; Eric J Kort; Rosemary Olivero; Sarah S Comstock; Dominic J Sanfilippo; Sophia Y Lunt; Jeremy W Prokop; Surender Rajasekaran
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2021-04-14       Impact factor: 6.011

2.  Consensus Clustering of temporal profiles for the identification of metabolic markers of pre-diabetes in childhood (EarlyBird 73).

Authors:  Mario Lauria; Maria Persico; Nikola Dordevic; Ornella Cominetti; Alice Matone; Joanne Hosking; Alison Jeffery; Jonathan Pinkney; Laeticia Da Silva; Corrado Priami; Ivan Montoliu; François-Pierre Martin
Journal:  Sci Rep       Date:  2018-01-23       Impact factor: 4.379

Review 3.  Longitudinal omics modeling and integration in clinical metabonomics research: challenges in childhood metabolic health research.

Authors:  Peter Sperisen; Ornella Cominetti; François-Pierre J Martin
Journal:  Front Mol Biosci       Date:  2015-08-05

4.  A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection.

Authors:  Slim Fourati; Aarthi Talla; Mehrad Mahmoudian; Joshua G Burkhart; Riku Klén; Ricardo Henao; Thomas Yu; Zafer Aydın; Ka Yee Yeung; Mehmet Eren Ahsen; Reem Almugbel; Samad Jahandideh; Xiao Liang; Torbjörn E M Nordling; Motoki Shiga; Ana Stanescu; Robert Vogel; Gaurav Pandey; Christopher Chiu; Micah T McClain; Christopher W Woods; Geoffrey S Ginsburg; Laura L Elo; Ephraim L Tsalik; Lara M Mangravite; Solveig K Sieberts
Journal:  Nat Commun       Date:  2018-10-24       Impact factor: 14.919
  4 in total

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