Literature DB >> 24676863

Global analysis of the ground-state wrapping conformation of a charged polymer on an oppositely charged nano-sphere.

Hoda Boroudjerdi1, Ali Naji, A Naji, R Netz.   

Abstract

We investigate the wrapping conformations of a single, strongly adsorbed polymer chain on an oppositely charged nano-sphere by employing a reduced (dimensionless) representation of a primitive chain-sphere model. This enables us to determine the global behavior of the chain conformation in a wide range of values for the system parameters including the chain contour length, its linear charge density and persistence length as well as the nano-sphere charge and radius, and also the salt concentration in the bathing solution. The structural behavior of a charged chain-sphere complex can be described in terms of a few distinct conformational symmetry classes separated by continuous or discontinuous transition lines which are determined by means of appropriately defined (order) parameters. Our results can be applied to a wide class of strongly coupled polymer-sphere complexes including, for instance, complexes that comprise a mechanically flexible or semiflexible polymer chain or an extremely short or long chain and, as a special case, include the biologically relevant example of DNA-histone complexes.

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Year:  2014        PMID: 24676863     DOI: 10.1140/epje/i2014-14021-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  47 in total

1.  Counterion release and electrostatic adsorption

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Journal:  Phys Rev Lett       Date:  2000-05-22       Impact factor: 9.161

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Authors:  L J Libertini; E W Small
Journal:  Nucleic Acids Res       Date:  1987-08-25       Impact factor: 16.971

4.  An absolute method for the determination of the persistence length of native DNA from electron micrographs.

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Journal:  Biopolymers       Date:  1979-06       Impact factor: 2.505

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Journal:  Nature       Date:  1993-03-11       Impact factor: 49.962

6.  Nucleosome core particle stability and conformational change. Effect of temperature, particle and NaCl concentrations, and crosslinking of histone H3 sulfhydryl groups.

Authors:  J Ausio; D Seger; H Eisenberg
Journal:  J Mol Biol       Date:  1984-06-15       Impact factor: 5.469

7.  Salt-modulated structure of polyelectrolyte-macroion complex fibers.

Authors:  Hoda Boroudjerdi; Ali Naji; Roland R Netz
Journal:  Eur Phys J E Soft Matter       Date:  2011-07-28       Impact factor: 1.890

8.  Structure and dynamics of DNA-dendrimer complexation: role of counterions, water, and base pair sequence.

Authors:  Prabal K Maiti; Biman Bagchi
Journal:  Nano Lett       Date:  2006-11       Impact factor: 11.189

9.  Wrapping transition and wrapping-mediated interactions for discrete binding along an elastic filament: an exact solution.

Authors:  David S Dean; Thomas C Hammant; Ronald R Horgan; Ali Naji; Rudolf Podgornik
Journal:  J Chem Phys       Date:  2012-10-14       Impact factor: 3.488

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Authors:  G Russev; L Vassilev; R Tsanev
Journal:  Mol Biol Rep       Date:  1980-03-31       Impact factor: 2.316

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  1 in total

1.  Critical adsorption of multiple polyelectrolytes onto a nanosphere: splitting the adsorption-desorption transition boundary.

Authors:  Daniel L Z Caetano; Sidney J de Carvalho; Ralf Metzler; Andrey G Cherstvy
Journal:  J R Soc Interface       Date:  2020-06-24       Impact factor: 4.118

  1 in total

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