Literature DB >> 24676685

Intraclass diversification of immunoglobulin heavy chain genes in the African lungfish.

Tianyi Zhang1, Luca Tacchi, Zhiguo Wei, Yaofeng Zhao, Irene Salinas.   

Abstract

Lungfish (Dipnoi) are the closest living relatives to tetrapods, and they represent the transition from water to land during vertebrate evolution. Lungfish are armed with immunoglobulins (Igs), one of the hallmarks of the adaptive immune system of jawed vertebrates, but only three Ig forms have been characterized in Dipnoi to date. We report here a new diversity of Ig molecules in two African lungfish species (Protopterus dolloi and Protopterus annectens). The African lungfish Igs consist of three IgMs, two IgWs, three IgNs, and an IgQ, where both IgN and IgQ originated evidently from the IgW lineage. Our data also suggest that the IgH genes in the lungfish are organized in a transiting form from clusters (IgH loci in cartilaginous fish) to a translocon configuration (IgH locus in tetrapods). We propose that the intraclass diversification of the two primordial gnathostome Ig classes (IgM and IgW) as well as acquisition of new isotypes (IgN and IgQ) has allowed lungfish to acquire a complex and functionally diverse Ig repertoire to fight a variety of microorganisms. Furthermore, our results support the idea that "tetrapod-specific" Ig classes did not evolve until the vertebrate adaptation to land was completed ~360 million years ago.

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Year:  2014        PMID: 24676685      PMCID: PMC4348116          DOI: 10.1007/s00251-014-0769-2

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  25 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Multiple sequence alignment with the Clustal series of programs.

Authors:  Ramu Chenna; Hideaki Sugawara; Tadashi Koike; Rodrigo Lopez; Toby J Gibson; Desmond G Higgins; Julie D Thompson
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 3.  Comparative analyses of immunoglobulin genes: surprises and portents.

Authors:  Martin F Flajnik
Journal:  Nat Rev Immunol       Date:  2002-09       Impact factor: 53.106

4.  Lineage-restricted retention of a primitive immunoglobulin heavy chain isotype within the Dipnoi reveals an evolutionary paradox.

Authors:  Tatsuya Ota; Jonathan P Rast; Gary W Litman; Chris T Amemiya
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-26       Impact factor: 11.205

5.  Unprecedented multiplicity of Ig transmembrane and secretory mRNA forms in the cartilaginous fish.

Authors:  Lynn L Rumfelt; Marilyn Diaz; Rebecca L Lohr; Evonne Mochon; Martin F Flajnik
Journal:  J Immunol       Date:  2004-07-15       Impact factor: 5.422

6.  IgH loci of American alligator and saltwater crocodile shed light on IgA evolution.

Authors:  Susana Magadán-Mompó; Christian Sánchez-Espinel; Francisco Gambón-Deza
Journal:  Immunogenetics       Date:  2013-04-05       Impact factor: 2.846

7.  Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates.

Authors:  Henner Brinkmann; Byrappa Venkatesh; Sydney Brenner; Axel Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-22       Impact factor: 11.205

8.  MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences.

Authors:  James J Campanella; Ledion Bitincka; John Smalley
Journal:  BMC Bioinformatics       Date:  2003-07-10       Impact factor: 3.169

9.  The African coelacanth genome provides insights into tetrapod evolution.

Authors:  Chris T Amemiya; Jessica Alföldi; Alison P Lee; Shaohua Fan; Hervé Philippe; Iain Maccallum; Ingo Braasch; Tereza Manousaki; Igor Schneider; Nicolas Rohner; Chris Organ; Domitille Chalopin; Jeramiah J Smith; Mark Robinson; Rosemary A Dorrington; Marco Gerdol; Bronwen Aken; Maria Assunta Biscotti; Marco Barucca; Denis Baurain; Aaron M Berlin; Gregory L Blatch; Francesco Buonocore; Thorsten Burmester; Michael S Campbell; Adriana Canapa; John P Cannon; Alan Christoffels; Gianluca De Moro; Adrienne L Edkins; Lin Fan; Anna Maria Fausto; Nathalie Feiner; Mariko Forconi; Junaid Gamieldien; Sante Gnerre; Andreas Gnirke; Jared V Goldstone; Wilfried Haerty; Mark E Hahn; Uljana Hesse; Steve Hoffmann; Jeremy Johnson; Sibel I Karchner; Shigehiro Kuraku; Marcia Lara; Joshua Z Levin; Gary W Litman; Evan Mauceli; Tsutomu Miyake; M Gail Mueller; David R Nelson; Anne Nitsche; Ettore Olmo; Tatsuya Ota; Alberto Pallavicini; Sumir Panji; Barbara Picone; Chris P Ponting; Sonja J Prohaska; Dariusz Przybylski; Nil Ratan Saha; Vydianathan Ravi; Filipe J Ribeiro; Tatjana Sauka-Spengler; Giuseppe Scapigliati; Stephen M J Searle; Ted Sharpe; Oleg Simakov; Peter F Stadler; John J Stegeman; Kenta Sumiyama; Diana Tabbaa; Hakim Tafer; Jason Turner-Maier; Peter van Heusden; Simon White; Louise Williams; Mark Yandell; Henner Brinkmann; Jean-Nicolas Volff; Clifford J Tabin; Neil Shubin; Manfred Schartl; David B Jaffe; John H Postlethwait; Byrappa Venkatesh; Federica Di Palma; Eric S Lander; Axel Meyer; Kerstin Lindblad-Toh
Journal:  Nature       Date:  2013-04-18       Impact factor: 49.962

10.  Discovery of J chain in African lungfish (Protopterus dolloi, Sarcopterygii) using high throughput transcriptome sequencing: implications in mucosal immunity.

Authors:  Luca Tacchi; Erin Larragoite; Irene Salinas
Journal:  PLoS One       Date:  2013-08-14       Impact factor: 3.240

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  5 in total

1.  African Lungfish Reveal the Evolutionary Origins of Organized Mucosal Lymphoid Tissue in Vertebrates.

Authors:  Luca Tacchi; Erin T Larragoite; Pilar Muñoz; Chris T Amemiya; Irene Salinas
Journal:  Curr Biol       Date:  2015-09-03       Impact factor: 10.834

Review 2.  The immunoglobulins of cold-blooded vertebrates.

Authors:  Rita Pettinello; Helen Dooley
Journal:  Biomolecules       Date:  2014-11-24

Review 3.  Fish Immunoglobulins.

Authors:  Sara Mashoof; Michael F Criscitiello
Journal:  Biology (Basel)       Date:  2016-11-21

4.  Effects of Experimental Terrestrialization on the Skin Mucus Proteome of African Lungfish (Protopterus dolloi).

Authors:  Ryan D Heimroth; Elisa Casadei; Irene Salinas
Journal:  Front Immunol       Date:  2018-06-04       Impact factor: 7.561

Review 5.  A Comparison of the Innate and Adaptive Immune Systems in Cartilaginous Fish, Ray-Finned Fish, and Lobe-Finned Fish.

Authors:  Nicole C Smith; Matthew L Rise; Sherri L Christian
Journal:  Front Immunol       Date:  2019-10-10       Impact factor: 7.561

  5 in total

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