Literature DB >> 24675291

Metabolic efficiency underpins performance trade-offs in growth of Arabidopsis thaliana.

Sabrina Kleessen1, Roosa Laitinen2, Corina M Fusari3, Carla Antonio4, Ronan Sulpice5, Alisdair R Fernie6, Mark Stitt7, Zoran Nikoloski1.   

Abstract

Growth often involves a trade-off between the performance of contending tasks; metabolic plasticity can play an important role. Here we grow 97 Arabidopsis thaliana accessions in three conditions with a differing supply of carbon and nitrogen and identify a trade-off between two tasks required for rosette growth: increasing the physical size and increasing the protein concentration. We employ the Pareto performance frontier concept to rank accessions based on their multitask performance; only a few accessions achieve a good trade-off under all three growth conditions. We determine metabolic efficiency in each accession and condition by using metabolite levels and activities of enzymes involved in growth and protein synthesis. We demonstrate that accessions with high metabolic efficiency lie closer to the performance frontier and show increased metabolic plasticity. We illustrate how public domain data can be used to search for additional contending tasks, which may underlie the sub-optimality in some accessions.

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Year:  2014        PMID: 24675291     DOI: 10.1038/ncomms4537

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  12 in total

1.  Integrative Approaches to Enhance Understanding of Plant Metabolic Pathway Structure and Regulation.

Authors:  Takayuki Tohge; Federico Scossa; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2015-09-14       Impact factor: 8.340

2.  Heterotic patterns of primary and secondary metabolites in the oilseed crop Brassica juncea.

Authors:  Prabodh K Bajpai; Michael Reichelt; Rehna Augustine; Jonathan Gershenzon; Naveen C Bisht
Journal:  Heredity (Edinb)       Date:  2019-03-25       Impact factor: 3.821

3.  Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems.

Authors:  Simon C Groen; Zoé Joly-Lopez; Adrian E Platts; Mignon Natividad; Zoë Fresquez; William M Mauck; Marinell R Quintana; Carlo Leo U Cabral; Rolando O Torres; Rahul Satija; Michael D Purugganan; Amelia Henry
Journal:  Plant Cell       Date:  2022-02-03       Impact factor: 11.277

4.  Unraveling the Light-Specific Metabolic and Regulatory Signatures of Rice through Combined in Silico Modeling and Multiomics Analysis.

Authors:  Meiyappan Lakshmanan; Sun-Hyung Lim; Bijayalaxmi Mohanty; Jae Kwang Kim; Sun-Hwa Ha; Dong-Yup Lee
Journal:  Plant Physiol       Date:  2015-10-09       Impact factor: 8.340

Review 5.  Should I fight or should I grow now? The role of cytokinins in plant growth and immunity and in the growth-defence trade-off.

Authors:  Tessa Albrecht; Cristiana T Argueso
Journal:  Ann Bot       Date:  2017-03-01       Impact factor: 4.357

6.  Metabolic prediction of important agronomic traits in hybrid rice (Oryza sativa L.).

Authors:  Zhiwu Dan; Jun Hu; Wei Zhou; Guoxin Yao; Renshan Zhu; Yingguo Zhu; Wenchao Huang
Journal:  Sci Rep       Date:  2016-02-24       Impact factor: 4.379

7.  Cattle infection response network and its functional modules.

Authors:  Hamid Beiki; Abbas Pakdel; Ardeshir Nejati Javaremi; Ali Masoudi-Nejad; James M Reecy
Journal:  BMC Immunol       Date:  2018-01-05       Impact factor: 3.615

8.  Making life difficult for Clostridium difficile: augmenting the pathogen's metabolic model with transcriptomic and codon usage data for better therapeutic target characterization.

Authors:  Sara Saheb Kashaf; Claudio Angione; Pietro Lió
Journal:  BMC Syst Biol       Date:  2017-02-16

9.  Gene co-expression network analysis reveals pathways associated with graft healing by asymmetric profiling in tomato.

Authors:  Lulu Xie; Chunjuan Dong; Qingmao Shang
Journal:  BMC Plant Biol       Date:  2019-08-24       Impact factor: 4.215

Review 10.  Genome-wide association studies: assessing trait characteristics in model and crop plants.

Authors:  Saleh Alseekh; Dimitrina Kostova; Mustafa Bulut; Alisdair R Fernie
Journal:  Cell Mol Life Sci       Date:  2021-07-01       Impact factor: 9.261

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