Literature DB >> 24662221

Genomic insights into tuberculosis.

James E Galagan1.   

Abstract

Prevalent since pre-history, human tuberculosis - caused by the pathogen Mycobacterium tuberculosis - remains a major source of death worldwide. Moreover, increasing drug resistance poses the threat of disease resurgence. However, the expanding application of genomic techniques is providing new avenues for combating this old foe. Whole-genome sequencing, comparative genomics and systems biology are generating new insights into the origins and ongoing evolution of M. tuberculosis, as well as the molecular basis for its pathogenicity. These have important implications for our perspective of the disease, development of new drugs and vaccines, and treatment of patients using existing therapeutics.

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Year:  2014        PMID: 24662221     DOI: 10.1038/nrg3664

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  173 in total

Review 1.  Lateral gene transfer and the origins of prokaryotic groups.

Authors:  Yan Boucher; Christophe J Douady; R Thane Papke; David A Walsh; Mary Ellen R Boudreau; Camilla L Nesbø; Rebecca J Case; W Ford Doolittle
Journal:  Annu Rev Genet       Date:  2003       Impact factor: 16.830

2.  Does M. tuberculosis genomic diversity explain disease diversity?

Authors:  Mireilla Coscolla; Sebastien Gagneux
Journal:  Drug Discov Today Dis Mech       Date:  2010

3.  The history of tuberculosis as a global epidemic.

Authors:  J H Bates; W W Stead
Journal:  Med Clin North Am       Date:  1993-11       Impact factor: 5.456

4.  Identification of variable regions in the genomes of tubercle bacilli using bacterial artificial chromosome arrays.

Authors:  S V Gordon; R Brosch; A Billault; T Garnier; K Eiglmeier; S T Cole
Journal:  Mol Microbiol       Date:  1999-05       Impact factor: 3.501

5.  Massive gene duplication event among clinical isolates of the Mycobacterium tuberculosis W/Beijing family.

Authors:  Pilar Domenech; Gaëlle S Kolly; Lizbel Leon-Solis; Ashley Fallow; Michael B Reed
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

6.  Tuberculosis drug resistance: a global threat.

Authors:  Jean B Nachega; Richard E Chaisson
Journal:  Clin Infect Dis       Date:  2003-01-15       Impact factor: 9.079

Review 7.  Microbial persistence and the road to drug resistance.

Authors:  Nadia R Cohen; Michael A Lobritz; James J Collins
Journal:  Cell Host Microbe       Date:  2013-06-12       Impact factor: 21.023

8.  Novel Mycobacterium tuberculosis complex pathogen, M. mungi.

Authors:  Kathleen A Alexander; Pete N Laver; Anita L Michel; Mark Williams; Paul D van Helden; Robin M Warren; Nicolaas C Gey van Pittius
Journal:  Emerg Infect Dis       Date:  2010-08       Impact factor: 6.883

9.  Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis.

Authors:  M Cristina Gutierrez; Sylvain Brisse; Roland Brosch; Michel Fabre; Bahia Omaïs; Magali Marmiesse; Philip Supply; Veronique Vincent
Journal:  PLoS Pathog       Date:  2005-08-19       Impact factor: 6.823

10.  Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans.

Authors:  Iñaki Comas; Mireia Coscolla; Tao Luo; Sonia Borrell; Kathryn E Holt; Midori Kato-Maeda; Julian Parkhill; Bijaya Malla; Stefan Berg; Guy Thwaites; Dorothy Yeboah-Manu; Graham Bothamley; Jian Mei; Lanhai Wei; Stephen Bentley; Simon R Harris; Stefan Niemann; Roland Diel; Abraham Aseffa; Qian Gao; Douglas Young; Sebastien Gagneux
Journal:  Nat Genet       Date:  2013-09-01       Impact factor: 38.330

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  75 in total

1.  Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Authors:  Lizbeth Sayavedra; Manuel Kleiner; Ruby Ponnudurai; Silke Wetzel; Eric Pelletier; Valerie Barbe; Nori Satoh; Eiichi Shoguchi; Dennis Fink; Corinna Breusing; Thorsten Bh Reusch; Philip Rosenstiel; Markus B Schilhabel; Dörte Becher; Thomas Schweder; Stephanie Markert; Nicole Dubilier; Jillian M Petersen
Journal:  Elife       Date:  2015-09-15       Impact factor: 8.140

Review 2.  From Evolutionary Advantage to Disease Agents: Forensic Reevaluation of Host-Microbe Interactions and Pathogenicity.

Authors:  Jessica I Rivera-Pérez; Alfredo A González; Gary A Toranzos
Journal:  Microbiol Spectr       Date:  2017-01

3.  Direct DNA Extraction from Mycobacterium tuberculosis Frozen Stocks as a Reculture-Independent Approach to Whole-Genome Sequencing.

Authors:  K Bjorn-Mortensen; J Zallet; T Lillebaek; A B Andersen; S Niemann; E M Rasmussen; T A Kohl
Journal:  J Clin Microbiol       Date:  2015-05-27       Impact factor: 5.948

4.  Isolation and characterization of nontuberculous mycobacteria from patients with pulmonary tuberculosis in Ghana.

Authors:  Isaac Darko Otchere; Adwoa Asante-Poku; Stephen Osei-Wusu; Samuel Yaw Aboagye; Dorothy Yeboah-Manu
Journal:  Int J Mycobacteriol       Date:  2017 Jan-Mar

Review 5.  A microbiological revolution meets an ancient disease: improving the management of tuberculosis with genomics.

Authors:  Marta Wlodarska; James C Johnston; Jennifer L Gardy; Patrick Tang
Journal:  Clin Microbiol Rev       Date:  2015-04       Impact factor: 26.132

Review 6.  Importance of differential identification of Mycobacterium tuberculosis strains for understanding differences in their prevalence, treatment efficacy, and vaccine development.

Authors:  Hansong Chae; Sung Jae Shin
Journal:  J Microbiol       Date:  2018-05-02       Impact factor: 3.422

7.  The emergence of latent infection in the early evolution of Mycobacterium tuberculosis.

Authors:  Rebecca H Chisholm; Mark M Tanaka
Journal:  Proc Biol Sci       Date:  2016-05-25       Impact factor: 5.349

8.  Controlled fire use in early humans might have triggered the evolutionary emergence of tuberculosis.

Authors:  Rebecca H Chisholm; James M Trauer; Darren Curnoe; Mark M Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-25       Impact factor: 11.205

9.  Geographic Differences in the Contribution of ubiA Mutations to High-Level Ethambutol Resistance in Mycobacterium tuberculosis.

Authors:  Subramanya Lingaraju; Leen Rigouts; Aditi Gupta; Jongseok Lee; Alaine Nyaruhirira Umubyeyi; Amy L Davidow; Susan German; EunJin Cho; Ji-Im Lee; Sang-Nae Cho; Cheon Tae Kim; David Alland; Hassan Safi
Journal:  Antimicrob Agents Chemother       Date:  2016-06-20       Impact factor: 5.191

10.  Characterization of promoter of the tuberculosis-resistant gene intracellular pathogen resistance 1.

Authors:  Yongyan Wu; Fayang Liu; Yan Zhang; Yongsheng Wang; Zekun Guo; Yong Zhang
Journal:  Immunol Res       Date:  2016-02       Impact factor: 2.829

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