| Literature DB >> 24660812 |
Qi-Yin Chen1, Yanxia Liu, Weijing Cai, Hendrik Luesch.
Abstract
Apratoxins are cytotoxic natural products originally isolated from marine cyanobacteria that act by preventing cotranslational translocation early in the secretory pathway to downregulate receptor levels and inhibit growth factor secretion, leading to potent antiproliferative activity. Through rational design and total synthesis of an apratoxin A/E hybrid, apratoxin S4 (1a), we have previously improved the antitumor activity and tolerability in vivo. Compound 1a and newly designed analogues apratoxins S7-S9 (1b-d), with various degrees of methylation at C34 (1b,c) or epimeric configuration at C30 (1d), were efficiently synthesized utilizing improved procedures. Optimizations have been applied to the synthesis of key intermediate aldehyde 7 and further include the application of Leighton's silanes and modifications of Kelly's methods to induce thiazoline ring formation in other crucial steps of the apratoxin synthesis. Apratoxin S9 (1d) exhibited increased activity with subnanomolar potency. Apratoxin S8 (1c) lacks the propensity to be deactivated by dehydration and showed efficacy in a human HCT116 xenograft mouse model.Entities:
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Year: 2014 PMID: 24660812 PMCID: PMC3993931 DOI: 10.1021/jm4019965
Source DB: PubMed Journal: J Med Chem ISSN: 0022-2623 Impact factor: 7.446
Figure 1Natural apratoxins A and E and synthetic apratoxin S4.
Scheme 1Retrosynthetic Analysis of 1a and Analogues 1b–d
Scheme 2Synthesis of Aldehyde 7
Scheme 3Synthesis of 4a–c
Scheme 4Synthesis of 5a and 5b
Scheme 5Synthesis of 3a–d and Further 2a–d
Screening of Coupling Reagents for Preparation of 3a, 3c, and 3d (% Yield)
| entry | EDCI (%) | HATU (%) | BOP (%) | BEP (%) | PyAOP (%) |
|---|---|---|---|---|---|
| 1 ( | 63 | 50 | 80 | 87 | |
| 2 ( | 20 | 47 | 89 | ||
| 3 ( | 62 | 91 |
Coupling reagent was not tried.
1H NMR is complex.
Exploring the Conditions of Thiazoline Formation of 33c from 3c
| entry | reagents | solvent | temp (°C) | time (h) | yield (%) |
|---|---|---|---|---|---|
| 1 | Ph3PO/Tf2O | CH2Cl2 | 0 | 0.5 | trace |
| 2 | Ph3PO/Tf2O | CH2Cl2 | 0 | 24 | trace |
| 3 | Ph3PO/Tf2O | CH2Cl2 | 25 | 24 | trace |
| 4 | Ph3PO/Tf2O | (ClCH2)2 | 60 | 6 | trace |
| 5 | Ph3PO/Tf2O | (ClCH2)2 | 60 | 15 | 29 |
| 6 | TiCl4 | CH2Cl2 | 25 | 5 | 34 |
| 7 | TiCl4 | CH2Cl2 | 25–40 | 24–40 | 30 |
| 8 | TiCl4 | (ClCH2)2 | 60 | 2.5 | 72 |
Reactions were carried out using Ph3P=O (8 equiv) and Tf2O (4 equiv) for entries 1–5. TiCl4 (5 equiv) for entries 6–8 (10 mg scale reactions) or 2.5–3.0 equiv TiCl4 used for >30 mg scale reactions).
This reaction first was carried out at 25 °C for 24 h, when large amounts of starting material were still found by TLC and MS, and then this reaction was heated under reflux for another 16 h.
Reactions were monitored by MS, the bands of starting material and product on TLC were very close.
Products were isolated using preparative TLC plates.
Scheme 6Synthesis of Targets 1a–d
Screening of Coupling Reagents for Reaction of 2b and 6 to Form 36b
| entry | coupling reagent | yield of | yield of | ratio |
|---|---|---|---|---|
| 1 | HATU | 10 | 5 | 1:1 |
| 2 | PyAOP | 35 | 20 | 3:1 |
| 3 | DEPBT | 72 | 13 | 20:1 |
Summary of Yields of Final Products 1a–d
| apratoxin S4 ( | apratoxin S7 ( | apratoxin S8 ( | apratoxin S9 ( | |
|---|---|---|---|---|
| yield | 60.0 | 25.0 | 70.0 | 45.0 |
| total yield | 5.0 | 1.2 | 3.0 | 2.4 |
Yield over 3 steps.
Based on the reaction sequence: pivalaldehyde → 7 → 4 → 3 → 2 → 1.
Previous yield[2a] was 52%.
Previous yield[2a] was 0.8%.
Activities of Synthetic Apratoxins on HCT116 Cell Viability and VEGF-A Secretion
| apratoxin | IC50 (nM) | IC50 (nM) |
|---|---|---|
| S4 ( | 1.43 | 0.32 |
| S7 ( | 1.25 | 0.30 |
| S8 ( | 1.99 | 0.47 |
| S9 ( | 0.69 | 0.12 |
Determined after 48 h (n = 4).
Determined after 12 h (n = 3).
Figure 2SAR for synthetic apratoxins by immunoblot analysis for RTK (MET) levels.
Figure 3In vitro stability of apratoxins under various conditions. Apratoxins were incubated as indicated and extracted with ethyl acetate, subjected to LC-MS and monitored by using compound-specific MRM mode with harmine as internal standard. (A) Stability in aqueous solution, pH 7.40. (B) Stability in aqueous solution, pH 4.88. (C) Stability in mouse serum. (D) Cellular stability upon exposure to HCT116 protein lysate (0.7 mg/mL).
Microsomal Stability Studiesa
| apratoxin S4 ( | apratoxin S7 ( | apratoxin
S8 ( | apratoxin S9 ( | |||||
|---|---|---|---|---|---|---|---|---|
| time (min) | microsomes only | microsomes + NADPH | microsomes only | microsomes + NADPH | microsomes only | microsomes + NADPH | microsomes only | microsomes + NADPH |
| 0 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 |
| 3 | 87.05 ± 1.63 | 39.55 ± 1.06 | 66.60 ± 12.30 | 54.95 ± 4.74 | 74.10 ± 9.62 | 37.20 ± 1.27 | 83.10 ± 0.42 | 51.40 ± 8.06 |
| 5 | 70.80 ± 23.48 | 32.20 ± 16.12 | 60.50 ± 2.26 | 18.70 ± 1.41 | 77.45 ± 3.18 | 17.30 ± 2.55 | 71.40 ± 1.27 | 17.80 ± 0.28 |
| 15 | 87.20 ± 2.83 | 10.07 ± 1.46 | 76.55 ± 9.55 | 52.40 ± 2.40 | 63.45 ± 3.61 | 8.28 ± 2.86 | 45.25 ± 5.30 | 3.55 ± 0.25 |
| 30 | 73.85 ± 15.49 | 9.58 ± 1.03 | 54.80 ± 1.56 | 6.10 ± 1.96 | 74.75 ± 8.70 | 4.83 ± 1.05 | 56.05 ± 1.06 | 3.73 ± 0.25 |
| 60 | 87.10 ± 1.41 | 10.00 ± 0.71 | 54.50 ± 0.00 | 5.41 ± 1.09 | 81.25 ± 1.91 | 3.55 ± 0.91 | 48.45 ± 0.92 | 6.06 ± 2.40 |
| 120 | 55.25 ± 12.09 | 6.02 ± 2.11 | 53.85 ± 9.40 | 4.30 ± 0.82 | 70.05 ± 0.78 | 5.01 ± 0.23 | 56.25 ± 0.21 | 5.63 ± 0.18 |
Assays were done in triplicate. Values are expressed as % remaining. Mean values are shown ± SD.
Figure 4Dose-dependent in vivo activity of 1c using a HCT116 xenograft mouse model. (A) Subcutaneous tumor-bearing mice were injected daily ip with 1c (n = 7) or vehicle (n = 6), and tumor volumes were monitored over time to assess efficacy. Error bars indicate SEM (B) At the end of the efficacy study, tumors were analyzed by immunoblot analysis for levels of an RTK.