Literature DB >> 24657834

Genetic resources for quantitative trait analysis: novelty and efficiency in design from an Arabidopsis perspective.

Cris L Wijnen1, Joost J B Keurentjes2.   

Abstract

The use of genetic resources for the analysis of quantitative traits finds its roots in crop breeding but has seen a rejuvenation in Arabidopsis thaliana thanks to specific tools and genomic approaches. Although widely used in numerous crop and natural species, many approaches were first developed in this reference plant. We will discuss the scientific background and historical use of mapping populations in Arabidopsis and highlight the technological innovations that drove the development of novel strategies. We will especially lay emphasis on the methodologies used to generate the diverse population types and designate possible applications. Finally we highlight some of the most recent developments in generating genetic mapping resources and suggest specific usage for these novel tools and concepts.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24657834     DOI: 10.1016/j.pbi.2014.02.011

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  6 in total

1.  Epigenetic variation contributes to environmental adaptation of Arabidopsis thaliana.

Authors:  Rik Kooke; Joost J B Keurentjes
Journal:  Plant Signal Behav       Date:  2015

2.  Marker-based estimation of heritability in immortal populations.

Authors:  Willem Kruijer; Martin P Boer; Marcos Malosetti; Pádraic J Flood; Bas Engel; Rik Kooke; Joost J B Keurentjes; Fred A van Eeuwijk
Journal:  Genetics       Date:  2014-12-19       Impact factor: 4.562

3.  Ectopic lignification in the flax lignified bast fiber1 mutant stem is associated with tissue-specific modifications in gene expression and cell wall composition.

Authors:  Maxime Chantreau; Antoine Portelette; Rebecca Dauwe; Shingo Kiyoto; David Crônier; Kris Morreel; Sandrine Arribat; Godfrey Neutelings; Malika Chabi; Wout Boerjan; Arata Yoshinaga; François Mesnard; Sebastien Grec; Brigitte Chabbert; Simon Hawkins
Journal:  Plant Cell       Date:  2014-11-07       Impact factor: 11.277

Review 4.  Converging phenomics and genomics to study natural variation in plant photosynthetic efficiency.

Authors:  Roel F H M van Bezouw; Joost J B Keurentjes; Jeremy Harbinson; Mark G M Aarts
Journal:  Plant J       Date:  2019-01       Impact factor: 6.417

5.  Genetic architecture of plant stress resistance: multi-trait genome-wide association mapping.

Authors:  Manus P M Thoen; Nelson H Davila Olivas; Karen J Kloth; Silvia Coolen; Ping-Ping Huang; Mark G M Aarts; Johanna A Bac-Molenaar; Jaap Bakker; Harro J Bouwmeester; Colette Broekgaarden; Johan Bucher; Jacqueline Busscher-Lange; Xi Cheng; Emilie F Fradin; Maarten A Jongsma; Magdalena M Julkowska; Joost J B Keurentjes; Wilco Ligterink; Corné M J Pieterse; Carolien Ruyter-Spira; Geert Smant; Christa Testerink; Björn Usadel; Joop J A van Loon; Johan A van Pelt; Casper C van Schaik; Saskia C M van Wees; Richard G F Visser; Roeland Voorrips; Ben Vosman; Dick Vreugdenhil; Sonja Warmerdam; Gerrie L Wiegers; Joost van Heerwaarden; Willem Kruijer; Fred A van Eeuwijk; Marcel Dicke
Journal:  New Phytol       Date:  2016-10-04       Impact factor: 10.151

6.  A Genetic Dissection of Natural Variation for Stomatal Abundance Traits in Arabidopsis.

Authors:  Dolores Delgado; Eduardo Sánchez-Bermejo; Alberto de Marcos; Cristina Martín-Jimenez; Carmen Fenoll; Carlos Alonso-Blanco; Montaña Mena
Journal:  Front Plant Sci       Date:  2019-11-11       Impact factor: 5.753

  6 in total

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