Literature DB >> 24657090

CdiA from Enterobacter cloacae delivers a toxic ribosomal RNase into target bacteria.

Christina M Beck1, Robert P Morse2, David A Cunningham1, Angelina Iniguez2, David A Low3, Celia W Goulding4, Christopher S Hayes5.   

Abstract

Contact-dependent growth inhibition (CDI) is one mechanism of inter-bacterial competition. CDI(+) cells export large CdiA effector proteins, which carry a variety of C-terminal toxin domains (CdiA-CT). CdiA-CT toxins are specifically neutralized by cognate CdiI immunity proteins to protect toxin-producing cells from autoinhibition. Here, we use structure determination to elucidate the activity of a CDI toxin from Enterobacter cloacae (ECL). The structure of CdiA-CT(ECL) resembles the C-terminal nuclease domain of colicin E3, which cleaves 16S ribosomal RNA to disrupt protein synthesis. In accord with this structural homology, we show that CdiA-CT(ECL) uses the same nuclease activity to inhibit bacterial growth. Surprisingly, although colicin E3 and CdiA(ECL) carry equivalent toxin domains, the corresponding immunity proteins are unrelated in sequence, structure, and toxin-binding site. Together, these findings reveal unexpected diversity among 16S rRNases and suggest that these nucleases are robust and versatile payloads for a variety of toxin-delivery platforms.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24657090      PMCID: PMC4016183          DOI: 10.1016/j.str.2014.02.012

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  46 in total

1.  Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics.

Authors:  Dapeng Zhang; Robson F de Souza; Vivek Anantharaman; Lakshminarayan M Iyer; L Aravind
Journal:  Biol Direct       Date:  2012-06-25       Impact factor: 4.540

2.  Contact-dependent inhibition of growth in Escherichia coli.

Authors:  Stephanie K Aoki; Rupinderjit Pamma; Aaron D Hernday; Jessica E Bickham; Bruce A Braaten; David A Low
Journal:  Science       Date:  2005-08-19       Impact factor: 47.728

3.  Positive selection and recombination: major molecular mechanisms in colicin diversification.

Authors:  Y Tan; M A Riley
Journal:  Trends Ecol Evol       Date:  1997-08       Impact factor: 17.712

4.  Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems.

Authors:  Robert P Morse; Kiel C Nikolakakis; Julia L E Willett; Elias Gerrick; David A Low; Christopher S Hayes; Celia W Goulding
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-10       Impact factor: 11.205

5.  Temporal changes in the frequency of colicinogeny in Escherichia coli from house mice.

Authors:  David M Gordon; Margaret A Riley; Theodora Pinou
Journal:  Microbiology (Reading)       Date:  1998-08       Impact factor: 2.777

6.  Proline residues at the C terminus of nascent chains induce SsrA tagging during translation termination.

Authors:  Christopher S Hayes; Baundauna Bose; Robert T Sauer
Journal:  J Biol Chem       Date:  2002-07-08       Impact factor: 5.157

7.  HecA, a member of a class of adhesins produced by diverse pathogenic bacteria, contributes to the attachment, aggregation, epidermal cell killing, and virulence phenotypes of Erwinia chrysanthemi EC16 on Nicotiana clevelandii seedlings.

Authors:  Clemencia M Rojas; Jong Hyun Ham; Wen-Ling Deng; Jeff J Doyle; Alan Collmer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

8.  Cloning, nucleotide sequencing, and analysis of the AcrAB-TolC efflux pump of Enterobacter cloacae and determination of its involvement in antibiotic resistance in a clinical isolate.

Authors:  Astrid Pérez; Delia Canle; Cristina Latasa; Margarita Poza; Alejandro Beceiro; María del Mar Tomás; Ana Fernández; Susana Mallo; Sonia Pérez; Francisca Molina; Rosa Villanueva; Iñigo Lasa; Germán Bou
Journal:  Antimicrob Agents Chemother       Date:  2007-07-16       Impact factor: 5.191

9.  Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes.

Authors:  Lorna E Lancaster; Andreas Savelsbergh; Colin Kleanthous; Wolfgang Wintermeyer; Marina V Rodnina
Journal:  Mol Microbiol       Date:  2008-07       Impact factor: 3.501

10.  Delivery of CdiA nuclease toxins into target cells during contact-dependent growth inhibition.

Authors:  Julia S Webb; Kiel C Nikolakakis; Julia L E Willett; Stephanie K Aoki; Christopher S Hayes; David A Low
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

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  45 in total

1.  Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways.

Authors:  Julia L E Willett; Grant C Gucinski; Jackson P Fatherree; David A Low; Christopher S Hayes
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

2.  Can't you hear me knocking: contact-dependent competition and cooperation in bacteria.

Authors:  Allison M Jones; David A Low; Christopher S Hayes
Journal:  Emerg Top Life Sci       Date:  2017-04-21

Review 3.  Resilience of biochemical activity in protein domains in the face of structural divergence.

Authors:  Dapeng Zhang; Lakshminarayan M Iyer; A Maxwell Burroughs; L Aravind
Journal:  Curr Opin Struct Biol       Date:  2014-06-19       Impact factor: 6.809

4.  Activation of contact-dependent antibacterial tRNase toxins by translation elongation factors.

Authors:  Allison M Jones; Fernando Garza-Sánchez; Jaime So; Christopher S Hayes; David A Low
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

Review 5.  Multifaceted Interfaces of Bacterial Competition.

Authors:  Reed M Stubbendieck; Paul D Straight
Journal:  J Bacteriol       Date:  2016-07-28       Impact factor: 3.490

6.  The Cytoplasm-Entry Domain of Antibacterial CdiA Is a Dynamic α-Helical Bundle with Disulfide-Dependent Structural Features.

Authors:  Nicholas L Bartelli; Sheng Sun; Grant C Gucinski; Hongjun Zhou; Kiho Song; Christopher S Hayes; Frederick W Dahlquist
Journal:  J Mol Biol       Date:  2019-06-08       Impact factor: 5.469

7.  Contact-dependent growth inhibition induces high levels of antibiotic-tolerant persister cells in clonal bacterial populations.

Authors:  Anirban Ghosh; Özden Baltekin; Marcus Wäneskog; Dina Elkhalifa; Disa L Hammarlöf; Johan Elf; Sanna Koskiniemi
Journal:  EMBO J       Date:  2018-03-23       Impact factor: 11.598

8.  Introducing the new bacterial branch of the RNase A superfamily.

Authors:  Bonnie J Cuthbert; Kalistyn H Burley; Celia W Goulding
Journal:  RNA Biol       Date:  2017-11-21       Impact factor: 4.652

Review 9.  Contact-Dependent Growth Inhibition (CDI) and CdiB/CdiA Two-Partner Secretion Proteins.

Authors:  Julia L E Willett; Zachary C Ruhe; Celia W Goulding; David A Low; Christopher S Hayes
Journal:  J Mol Biol       Date:  2015-09-24       Impact factor: 5.469

10.  Functional Diversity of Cytotoxic tRNase/Immunity Protein Complexes from Burkholderia pseudomallei.

Authors:  Parker M Johnson; Grant C Gucinski; Fernando Garza-Sánchez; Timothy Wong; Li-Wei Hung; Christopher S Hayes; Celia W Goulding
Journal:  J Biol Chem       Date:  2016-07-20       Impact factor: 5.157

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