Literature DB >> 24649641

Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation.

Stéphane Dray, Philippe Choler, Sylvain Dolédec, Pedro R Peres-Neto, Wilfried Thuiller, Sandrine Pavoine, Cajo J F ter Braak.   

Abstract

Assessing trait responses to environmental gradients requires the simultaneous analysis of the information contained in three tables: L (species distribution across samples), R (environmental characteristics of samples), and Q (species traits). Among the available methods, the so-called fourth-corner and RLQ methods are two appealing alternatives that provide a direct way to test and estimate trait-nvironment relationships. Both methods are based on the analysis of the fourth-corner matrix, which crosses traits and environmental variables weighted by species abundances. However, they differ greatly in their outputs: RLQ is a multivariate technique that provides ordination scores to summarize the joint structure among the three tables, whereas the fourth-corner method mainly tests for individual trait-environment relationships (i.e., one trait and one environmental variable at a time). Here, we illustrate how the complementarity between these two methods can be exploited to promote new ecological knowledge and to improve the study of trait-environment relationships. After a short description of each method, we apply them to real ecological data to present their different outputs and provide hints about the gain resulting from their combined use.

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Year:  2014        PMID: 24649641     DOI: 10.1890/13-0196.1

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  31 in total

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4.  Soil fertility and water availability effects on trait dispersion and phylogenetic relatedness of tropical terrestrial ferns.

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5.  Multisubstrate DNA stable isotope probing reveals guild structure of bacteria that mediate soil carbon cycling.

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6.  Catchment scale deforestation increases the uniqueness of subtropical stream communities.

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Authors:  Paula B Matheus Carnevali; Adi Lavy; Alex D Thomas; Alexander Crits-Christoph; Spencer Diamond; Raphaël Méheust; Matthew R Olm; Allison Sharrar; Shufei Lei; Wenming Dong; Nicola Falco; Nicholas Bouskill; Michelle E Newcomer; Peter Nico; Haruko Wainwright; Dipankar Dwivedi; Kenneth H Williams; Susan Hubbard; Jillian F Banfield
Journal:  Microbiome       Date:  2021-05-22       Impact factor: 14.650

9.  Relationships between Community Level Functional Traits of Trees and Seedlings during Secondary Succession in a Tropical Lowland Rainforest.

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Journal:  PLoS One       Date:  2015-07-14       Impact factor: 3.240

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Authors:  Alessandro Ossola; Michael A Nash; Fiona J Christie; Amy K Hahs; Stephen J Livesley
Journal:  PeerJ       Date:  2015-10-22       Impact factor: 2.984

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