Literature DB >> 24644080

Gene regulatory networks governing lung specification.

Scott A Rankin1, Aaron M Zorn.   

Abstract

The epithelial lining of the respiratory system originates from a small group of progenitor cells in the ventral foregut endoderm of the early embryo. Research in the last decade has revealed a number of paracrine signaling pathways that are critical for the development of these respiratory progenitors. In the post-genomic era the challenge now is to figure out at the genome wide level how these different signaling pathways and their downstream transcription factors interact in a complex "gene regulatory network" (GRN) to orchestrate early lung development. In this prospective, we review our growing understanding of the GRN governing lung specification. We discuss key gaps in our knowledge and describe emerging opportunities that will soon provide an unprecedented understanding of lung development and accelerate our ability to apply this knowledge to regenerative medicine.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  GENE REGULATORY NETWORK; LUNG DEVELOPMENT; Nkx2.1; RESPIRATORY EPITHELIUM; SPECIFICATION

Mesh:

Substances:

Year:  2014        PMID: 24644080      PMCID: PMC4263286          DOI: 10.1002/jcb.24810

Source DB:  PubMed          Journal:  J Cell Biochem        ISSN: 0730-2312            Impact factor:   4.429


  55 in total

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Authors:  Yina Li; Julie Gordon; Nancy R Manley; Ying Litingtung; Chin Chiang
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Review 2.  The three R's of lung health and disease: repair, remodeling, and regeneration.

Authors:  Michael F Beers; Edward E Morrisey
Journal:  J Clin Invest       Date:  2011-06-01       Impact factor: 14.808

3.  Early postnatal lethality in Hoxa-5 mutant mice is attributable to respiratory tract defects.

Authors:  J Aubin; M Lemieux; M Tremblay; J Bérard; L Jeannotte
Journal:  Dev Biol       Date:  1997-12-15       Impact factor: 3.582

4.  Retinoic acid regulates morphogenesis and patterning of posterior foregut derivatives.

Authors:  Zengxin Wang; Pascal Dollé; Wellington V Cardoso; Karen Niederreither
Journal:  Dev Biol       Date:  2006-05-23       Impact factor: 3.582

5.  Essential function of Gli2 and Gli3 in the formation of lung, trachea and oesophagus.

Authors:  J Motoyama; J Liu; R Mo; Q Ding; M Post; C C Hui
Journal:  Nat Genet       Date:  1998-09       Impact factor: 38.330

Review 6.  The Hedgehog signal transduction network.

Authors:  David J Robbins; Dennis Liang Fei; Natalia A Riobo
Journal:  Sci Signal       Date:  2012-10-16       Impact factor: 8.192

7.  Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells.

Authors:  Ruiyu Xie; Logan J Everett; Hee-Woong Lim; Nisha A Patel; Jonathan Schug; Evert Kroon; Olivia G Kelly; Allen Wang; Kevin A D'Amour; Allan J Robins; Kyoung-Jae Won; Klaus H Kaestner; Maike Sander
Journal:  Cell Stem Cell       Date:  2013-01-11       Impact factor: 24.633

8.  Fgf10 is essential for limb and lung formation.

Authors:  K Sekine; H Ohuchi; M Fujiwara; M Yamasaki; T Yoshizawa; T Sato; N Yagishita; D Matsui; Y Koga; N Itoh; S Kato
Journal:  Nat Genet       Date:  1999-01       Impact factor: 38.330

9.  The transcription factor TTF-1 is expressed at the onset of thyroid and lung morphogenesis and in restricted regions of the foetal brain.

Authors:  D Lazzaro; M Price; M de Felice; R Di Lauro
Journal:  Development       Date:  1991-12       Impact factor: 6.868

10.  Prolonged FGF signaling is necessary for lung and liver induction in Xenopus.

Authors:  Emily T Shifley; Alan P Kenny; Scott A Rankin; Aaron M Zorn
Journal:  BMC Dev Biol       Date:  2012-09-18       Impact factor: 1.978

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  16 in total

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2.  Epithelial cell size dysregulation in human lung adenocarcinoma.

Authors:  Clifford W Sandlin; Song Gu; Jun Xu; Charuhas Deshpande; Michael D Feldman; Matthew C Good
Journal:  PLoS One       Date:  2022-10-06       Impact factor: 3.752

3.  Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development.

Authors:  Jeffrey D Steimle; Scott A Rankin; Christopher E Slagle; Jenna Bekeny; Ariel B Rydeen; Sunny Sun-Kin Chan; Junghun Kweon; Xinan H Yang; Kohta Ikegami; Rangarajan D Nadadur; Megan Rowton; Andrew D Hoffmann; Sonja Lazarevic; William Thomas; Erin A T Boyle Anderson; Marko E Horb; Luis Luna-Zurita; Robert K Ho; Michael Kyba; Bjarke Jensen; Aaron M Zorn; Frank L Conlon; Ivan P Moskowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-23       Impact factor: 11.205

4.  Drosophila FoxL1 non-autonomously coordinates organ placement during embryonic development.

Authors:  Caitlin D Hanlon; Deborah J Andrew
Journal:  Dev Biol       Date:  2016-09-13       Impact factor: 3.582

5.  Xenopus as a Model for GI/Pancreas Disease.

Authors:  Matthew C Salanga; Marko E Horb
Journal:  Curr Pathobiol Rep       Date:  2015-06-01

6.  In vitro generation of human pluripotent stem cell derived lung organoids.

Authors:  Briana R Dye; David R Hill; Michael A H Ferguson; Yu-Hwai Tsai; Melinda S Nagy; Rachel Dyal; James M Wells; Christopher N Mayhew; Roy Nattiv; Ophir D Klein; Eric S White; Gail H Deutsch; Jason R Spence
Journal:  Elife       Date:  2015-03-24       Impact factor: 8.140

Review 7.  LungMAP: The Molecular Atlas of Lung Development Program.

Authors:  Maryanne E Ardini-Poleske; Robert F Clark; Charles Ansong; James P Carson; Richard A Corley; Gail H Deutsch; James S Hagood; Naftali Kaminski; Thomas J Mariani; Steven S Potter; Gloria S Pryhuber; David Warburton; Jeffrey A Whitsett; Scott M Palmer; Namasivayam Ambalavanan
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2017-08-10       Impact factor: 5.464

8.  Endothelial cells are not required for specification of respiratory progenitors.

Authors:  Jamie A Havrilak; Kristin R Melton; John M Shannon
Journal:  Dev Biol       Date:  2017-05-10       Impact factor: 3.582

Review 9.  How to Grow a Lung: Applying Principles of Developmental Biology to Generate Lung Lineages from Human Pluripotent Stem Cells.

Authors:  Briana R Dye; Alyssa J Miller; Jason R Spence
Journal:  Curr Pathobiol Rep       Date:  2016-04-18

Review 10.  Suggested Mechanisms of Tracheal Occlusion Mediated Accelerated Fetal Lung Growth: A Case for Heterogeneous Topological Zones.

Authors:  Ahmed I Marwan; Uladzimir Shabeka; Evgenia Dobrinskikh
Journal:  Front Pediatr       Date:  2018-01-12       Impact factor: 3.418

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