Literature DB >> 24637770

Crystallization and preliminary X-ray analysis of the C-type lectin domain of the spicule matrix protein SM50 from Strongylocentrotus purpuratus.

Puneet Juneja1, Ashit Rao2, Helmut Cölfen2, Kay Diederichs1, Wolfram Welte1.   

Abstract

Sea urchin spicules have a calcitic mesocrystalline architecture that is closely associated with a matrix of proteins and amorphous minerals. The mechanism underlying spicule formation involves complex processes encompassing spatio-temporally regulated organic-inorganic interactions. C-type lectin domains are present in several spicule matrix proteins in Strongylocentrotus purpuratus, implying their role in spiculogenesis. In this study, the C-type lectin domain of SM50 was overexpressed, purified and crystallized using a vapour-diffusion method. The crystal diffracted to a resolution of 2.85 Å and belonged to space group P212121, with unit-cell parameters a = 100.6, b = 115.4, c = 130.6 Å, α = β = γ = 90°. Assuming 50% solvent content, six chains are expected to be present in the asymmetric unit.

Entities:  

Keywords:  C-type lectins; SM50; Strongylocentrotus purpuratus; spiculogenesis

Mesh:

Substances:

Year:  2014        PMID: 24637770      PMCID: PMC3936458          DOI: 10.1107/S2053230X14000880

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.072


  19 in total

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Journal:  Dev Biol       Date:  2006-08-15       Impact factor: 3.582

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Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

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Authors:  P Andrew Karplus; Kay Diederichs
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

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Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  A lineage-specific gene encoding a major matrix protein of the sea urchin embryo spicule. I. Authentication of the cloned gene and its developmental expression.

Authors:  S Benson; H Sucov; L Stephens; E Davidson; F Wilt
Journal:  Dev Biol       Date:  1987-04       Impact factor: 3.582

7.  Structure-property relationships of a biological mesocrystal in the adult sea urchin spine.

Authors:  Jong Seto; Yurong Ma; Sean A Davis; Fiona Meldrum; Aurelien Gourrier; Yi-Yeoun Kim; Uwe Schilde; Michael Sztucki; Manfred Burghammer; Sergey Maltsev; Christian Jäger; Helmut Cölfen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-16       Impact factor: 11.205

Review 8.  Recognition of complex carbohydrates by Ca(2+)-dependent animal lectins.

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Journal:  Biochem Soc Trans       Date:  1993-05       Impact factor: 5.407

9.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  1 in total

1.  Crystallization and preliminary X-ray analysis of the C-type lectin domain of the spicule matrix protein SM50 from Strongylocentrotus purpuratus. Corrigendum.

Authors:  Rebecca Ebenhoch; Puneet Juneja; Ashit Rao; Helmut Cölfen; Kay Diederichs; Wolfram Welte
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-08-09       Impact factor: 1.072

  1 in total

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